FC876677
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876677 vs. ExPASy Swiss-Prot
Match: IM30_PEA (Membrane-associated 30 kDa protein, chloroplastic OS=Pisum sativum GN=IM30 PE=2 SV=1) HSP 1 Score: 234.958 bits (598), Expect = 2.957e-61 Identity = 133/200 (66.50%), Postives = 152/200 (76.00%), Query Frame = 1 Query: 94 MAAKSQIVTGF-TMPMTPAPXXXXXXXXXXLCMVKKPLTTSFFNGG-VGALKVTRLRIAPSSRSYCYRQGGGALNTRMNLFDRLARVVKSYANAILSSFEDPENILEQAVLEMNDDLVKMRQATAQVLASHKRLENKYKAAEQASEDWYRKAQLALQKGEEDLAREALKRRKSYAHNANALKAQLDQQKNVVNNLVSNTR 687 M K QI +G + P+ P+ ++KKPL T+ F V LK +RIA R GGGA+ RMNLFDR ARVVKSYANA++S+FEDPE ILEQAVLEMNDDL KMRQATAQVLAS KRLENKYKAA+QASE+WYRKAQLALQKGEEDLAREALKRRKS+A NA++LKAQLDQQK+VV+NLVSNTR Sbjct: 1 MTTKFQIFSGLPSAPLQPSSS-----------LLKKPLATTLFGTRPVDTLKFRVMRIAKPVR------GGGAIGVRMNLFDRFARVVKSYANALVSTFEDPEKILEQAVLEMNDDLTKMRQATAQVLASQKRLENKYKAAQQASEEWYRKAQLALQKGEEDLAREALKRRKSFADNASSLKAQLDQQKSVVDNLVSNTR 183
BLAST of FC876677 vs. ExPASy Swiss-Prot
Match: IM30_ARATH (Probable membrane-associated 30 kDa protein, chloroplastic OS=Arabidopsis thaliana GN=At1g65260 PE=1 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 2.343e-58 Identity = 124/199 (62.31%), Postives = 146/199 (73.37%), Query Frame = 1 Query: 94 MAAKSQIVTGFTMPMTPAPXXXXXXXXXXLCMVK-KPLTTSFFNGGVGALKVTRLRIAPSSRSYCYRQGGGALNTRMNLFDRLARVVKSYANAILSSFEDPENILEQAVLEMNDDLVKMRQATAQVLASHKRLENKYKAAEQASEDWYRKAQLALQKGEEDLAREALKRRKSYAHNANALKAQLDQQKNVVNNLVSNTR 687 MA K+ VTG P+ P C ++ PL TSFF GAL+V LR+A +R C G GA MNLF+R +RVVKSYANA++SSFEDPE ILEQ V+EMN DL KMRQATAQVLAS K+L+NKYKAA+Q+S+DWY++AQLAL KG+EDLAREALKRRKS+A NA ALK QLDQQK VV+NLVSNTR Sbjct: 1 MALKASPVTGLFPPLRPTASSSPSTSSNRPCSLRILPLRTSFFGNSSGALRVNVLRLACDNRLRC--NGHGAT---MNLFERFSRVVKSYANALISSFEDPEKILEQTVIEMNSDLTKMRQATAQVLASQKQLQNKYKAAQQSSDDWYKRAQLALAKGDEDLAREALKRRKSFADNATALKTQLDQQKGVVDNLVSNTR 194
BLAST of FC876677 vs. ExPASy Swiss-Prot
Match: IM30_ORYSJ (Probable membrane-associated 30 kDa protein, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0895100 PE=1 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 3.740e-56 Identity = 118/162 (72.84%), Postives = 133/162 (82.10%), Query Frame = 1 Query: 202 LTTSFFNGGVGALKVTRLRIAPSSRSYCYRQGGGALNTRMNLFDRLARVVKSYANAILSSFEDPENILEQAVLEMNDDLVKMRQATAQVLASHKRLENKYKAAEQASEDWYRKAQLALQKGEEDLAREALKRRKSYAHNANALKAQLDQQKNVVNNLVSNTR 687 L TSF NG V +L++ ++R + +R C R NL DR +RVVKSYANA+LSSFEDPE IL+QAVLEMNDDL KMRQATAQVLAS KRLENKYKAAEQAS+DWYR+AQLALQKG+EDLAREALKRRKSYA NA++LKAQLDQQK VV NLVSNTR Sbjct: 27 LRTSFLNGSV-SLRLIQVRQSNVNRFKCN-------GIRSNLLDRFSRVVKSYANAVLSSFEDPEKILDQAVLEMNDDLTKMRQATAQVLASQKRLENKYKAAEQASDDWYRRAQLALQKGDEDLAREALKRRKSYADNASSLKAQLDQQKGVVENLVSNTR 180
BLAST of FC876677 vs. ExPASy Swiss-Prot
Match: Y617_SYNY3 (Uncharacterized protein sll0617 OS=Synechocystis sp. (strain PCC 6803) GN=sll0617 PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.459e-25 Identity = 59/121 (48.76%), Postives = 81/121 (66.94%), Query Frame = 1 Query: 319 MNLFDRLARVVKSYANAILSSFEDPENILEQAVLEMNDDLVKMRQATAQVLASHKRLENKYKAAEQASEDWYRKAQLALQKGEEDLAREALKRRKSYAHNANALKAQLDQQKNVVNNLVSN 681 M LFDRL RVV++ N ++S EDPE +LEQAV++M +DLV++RQA A+ +A KR E + Q ++ W +A+LAL GEE+LAREAL R+KS A A + QL QQ+ + NL N Sbjct: 1 MGLFDRLGRVVRANLNDLVSKAEDPEKVLEQAVIDMQEDLVQLRQAVARTIAEEKRTEQRLNQDTQEAKKWEDRAKLALTNGEENLAREALARKKSLTDTAAAYQTQLAQQRTMSENLRRN 121
BLAST of FC876677 vs. ExPASy Swiss-Prot
Match: PSPA_SHIFL (Phage shock protein A OS=Shigella flexneri GN=pspA PE=3 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 1.758e-13 Identity = 46/133 (34.59%), Postives = 68/133 (51.13%), Query Frame = 1 Query: 319 MNLFDRLARVVKSYANAILSSFEDPENILEQAVLEMNDDLVKMRQATAQVLASHKRLENKYKAAEQASEDWYRKAQLALQKGEEDLAREALKRR-------KSYAHNANALKAQLDQQKNVV---NNLVSNTR 687 M +F R A +V + NA+L EDP+ ++ + EM D LV++R +A+ LA K+L + + A +W KA+LAL K EDLAR AL + KS H + L + K + N +S TR Sbjct: 1 MGIFSRFADIVNANINALLEKAEDPQKLVRLMIQEMEDTLVEVRSTSARALAEKKQLTRRIEQASAREVEWQEKAELALLKEREDLARAALIEKQKLTDLIKSLEHEVTLVDDTLARMKKEIGELENKLSETR 133
BLAST of FC876677 vs. ExPASy Swiss-Prot
Match: PSPA_ECOLI (Phage shock protein A OS=Escherichia coli (strain K12) GN=pspA PE=1 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 1.758e-13 Identity = 46/133 (34.59%), Postives = 68/133 (51.13%), Query Frame = 1 Query: 319 MNLFDRLARVVKSYANAILSSFEDPENILEQAVLEMNDDLVKMRQATAQVLASHKRLENKYKAAEQASEDWYRKAQLALQKGEEDLAREALKRR-------KSYAHNANALKAQLDQQKNVV---NNLVSNTR 687 M +F R A +V + NA+L EDP+ ++ + EM D LV++R +A+ LA K+L + + A +W KA+LAL K EDLAR AL + KS H + L + K + N +S TR Sbjct: 1 MGIFSRFADIVNANINALLEKAEDPQKLVRLMIQEMEDTLVEVRSTSARALAEKKQLTRRIEQASAREVEWQEKAELALLKEREDLARAALIEKQKLTDLIKSLEHEVTLVDDTLARMKKEIGELENKLSETR 133
BLAST of FC876677 vs. ExPASy Swiss-Prot
Match: PSPA_ECO57 (Phage shock protein A OS=Escherichia coli O157:H7 GN=pspA PE=3 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 1.758e-13 Identity = 46/133 (34.59%), Postives = 68/133 (51.13%), Query Frame = 1 Query: 319 MNLFDRLARVVKSYANAILSSFEDPENILEQAVLEMNDDLVKMRQATAQVLASHKRLENKYKAAEQASEDWYRKAQLALQKGEEDLAREALKRR-------KSYAHNANALKAQLDQQKNVV---NNLVSNTR 687 M +F R A +V + NA+L EDP+ ++ + EM D LV++R +A+ LA K+L + + A +W KA+LAL K EDLAR AL + KS H + L + K + N +S TR Sbjct: 1 MGIFSRFADIVNANINALLEKAEDPQKLVRLMIQEMEDTLVEVRSTSARALAEKKQLTRRIEQASAREVEWQEKAELALLKEREDLARAALIEKQKLTDLIKSLEHEVTLVDDTLARMKKEIGELENKLSETR 133
BLAST of FC876677 vs. ExPASy Swiss-Prot
Match: PSPA_DEIRA (Phage shock protein A homolog OS=Deinococcus radiodurans GN=DR_1473 PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.296e-13 Identity = 40/123 (32.52%), Postives = 71/123 (57.72%), Query Frame = 1 Query: 319 MNLFDRLARVVKSYANAILSSFEDPENILEQAVLEMNDDLVKMRQATAQVLASHKRLENKYKAAEQASEDWYRKAQLALQKGEEDLAREALKRRKSYAHNANALKAQLDQQKNVVNNLVSNTR 687 M++FDRL+R++++ N ++S EDP I++QA+ +M R A +A +LE + + + ++ +KA+ AL+ G EDLAREAL+R +++ A Q Q++ V+ L + R Sbjct: 1 MSIFDRLSRLLRANVNDMISKAEDPAKIIDQALRDMRSAYADARNEVAGAMAQAAKLEREAGTNSKLAAEYEKKAEEALRGGSEDLAREALRRAQNHKDLAKGFDEQRTVQQSTVDQLKTQLR 123 The following BLAST results are available for this feature:
BLAST of FC876677 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876677 ID=FC876677; Name=FC876677; organism=Citrus clementina; type=EST; length=689bpback to top |