FC876700
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876700 vs. ExPASy Swiss-Prot
Match: WAP53_MESAU (Telomerase Cajal body protein 1 OS=Mesocricetus auratus GN=Wrap53 PE=2 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 1.361e-52 Identity = 66/138 (47.83%), Postives = 96/138 (69.57%), Query Frame = 3 Query: 315 LRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQERGVTHVQFSRDGNYLYTGGRKDPYILCWDLRK 728 LR ++RAY+ +DE+TAA S+ F+P G+++F G+N++VRVF RPGRD E +T K+GQ+GI+S IAFSP+ + A GSY +T +Y D+ L +L G + G+TH+ F DGN ++G RKD +LCWDLR+ Sbjct: 252 LRASFRAYNHLDELTAAHSLCFSPDGSQLFCGFNRTVRVFSTSRPGRDCEVRATF-AKKQGQSGIISCIAFSPSQP-LYACGSYGRTLGLYAWDDGSPLALLGGHQGGITHLCFHPDGNLFFSGARKDAELLCWDLRQ 387 HSP 2 Score: 92.8189 bits (229), Expect = 1.361e-52 Identity = 46/100 (46.00%), Postives = 64/100 (64.00%), Query Frame = 2 Query: 23 NFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVV---TEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATT 313 NFLKG KW+PDGS LT+S D TLRI++LP S A +Q Y + V EG+++YD+CW+ MS+S P + AS++R++PIH+WDA T Sbjct: 158 NFLKGCKWAPDGSCILTNSADNTLRIYNLPPELYS--------ATEQVDYAEMVPVLRMVEGDTIYDYCWYSLMSSSQPDTSYVASSSRENPIHIWDAFT 249
BLAST of FC876700 vs. ExPASy Swiss-Prot
Match: WAP53_MOUSE (Telomerase Cajal body protein 1 OS=Mus musculus GN=Wrap53 PE=2 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 1.927e-51 Identity = 66/138 (47.83%), Postives = 96/138 (69.57%), Query Frame = 3 Query: 315 LRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQERGVTHVQFSRDGNYLYTGGRKDPYILCWDLRK 728 LR ++RAY+ +DE+TAA S+ F+P G+++F G+N++VRVF RPGRD E +T K+GQ+GI+S IAFSP+ + A GSY +T +Y D+ L +L G + G+TH+ F DGN ++G RKD +LCWDLR+ Sbjct: 248 LRASFRAYNHLDELTAAHSLCFSPDGSQLFCGFNRTVRVFSTSRPGRDCEVRATF-AKKQGQSGIISCIAFSPSQP-LYACGSYGRTIGLYAWDDGSPLALLGGHQGGITHLCFHPDGNLFFSGARKDAELLCWDLRQ 383 HSP 2 Score: 88.9669 bits (219), Expect = 1.927e-51 Identity = 42/97 (43.30%), Postives = 60/97 (61.86%), Query Frame = 2 Query: 23 NFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATT 313 NFLKG KW+PDGS LT+S D LRI++LP S D L + EG+++YD+CW+ MS++ P + AS++R++PIH+WDA T Sbjct: 154 NFLKGCKWAPDGSCILTNSADNVLRIYNLPPELYSEQEQV-----DYAEMVPVLRMVEGDTIYDYCWYSLMSSTQPDTSYVASSSRENPIHIWDAFT 245
BLAST of FC876700 vs. ExPASy Swiss-Prot
Match: WAP53_RAT (Telomerase Cajal body protein 1 OS=Rattus norvegicus GN=Wrap53 PE=2 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 3.275e-51 Identity = 65/138 (47.10%), Postives = 95/138 (68.84%), Query Frame = 3 Query: 315 LRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQERGVTHVQFSRDGNYLYTGGRKDPYILCWDLRK 728 LR ++RAY+ +DE+TAA S+ F+P G+++F G+N++VRVF RPGRD E +T K+GQ+GI+S +AFSP + A GSY +T +Y D+ L +L G + G+TH+ F DGN ++G RKD +LCWDLR+ Sbjct: 248 LRASFRAYNHLDELTAAHSLCFSPDGSQLFCGFNRTVRVFSTSRPGRDCEVRTTF-AKKQGQSGIISCLAFSPAQP-LYACGSYGRTLGLYAWDDGSPLALLGGHQGGITHLCFHPDGNLFFSGARKDAELLCWDLRQ 383 HSP 2 Score: 89.3521 bits (220), Expect = 3.275e-51 Identity = 42/97 (43.30%), Postives = 63/97 (64.95%), Query Frame = 2 Query: 23 NFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATT 313 NFLKG KW+PDGS LT+S D LRI++LP ++ + S D L + EG+++YD+CW+ MS++ P + AS++R++PIH+WDA T Sbjct: 154 NFLKGCKWAPDGSCILTNSADNVLRIYNLPP-----ELYSESEQVDYAEMVPVLRMVEGDTIYDYCWYSLMSSTQPDTSYVASSSRENPIHIWDAFT 245
BLAST of FC876700 vs. ExPASy Swiss-Prot
Match: WAP53_HUMAN (Telomerase Cajal body protein 1 OS=Homo sapiens GN=WRAP53 PE=1 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 9.451e-51 Identity = 65/139 (46.76%), Postives = 96/139 (69.06%), Query Frame = 3 Query: 315 LRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQERGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKA 731 LR ++RAY+ +DE+TAA S+ F+P G+++F G+N++VRVF RPGRD E +T K+GQ+GI+S IAFSP + A GSY ++ +Y D+ L +L G + G+TH+ F DGN ++G RKD +LCWDLR++ Sbjct: 264 LRASFRAYNHLDELTAAHSLCFSPDGSQLFCGFNRTVRVFSTARPGRDCEVRATF-AKKQGQSGIISCIAFSPAQP-LYACGSYGRSLGLYAWDDGSPLALLGGHQGGITHLCFHPDGNRFFSGARKDAELLCWDLRQS 400 HSP 2 Score: 88.9669 bits (219), Expect = 9.451e-51 Identity = 42/99 (42.42%), Postives = 64/99 (64.65%), Query Frame = 2 Query: 17 PNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATT 313 P NFLKG KW+PDGS LT+S D LRI++LP + ++ A+ L + EG+++YD+CW+ MS++ P + AS++R++PIH+WDA T Sbjct: 168 PENFLKGCKWAPDGSCILTNSADNILRIYNLPPE-LYHEGEQVEYAE----MVPVLRMVEGDTIYDYCWYSLMSSAQPDTSYVASSSRENPIHIWDAFT 261
BLAST of FC876700 vs. ExPASy Swiss-Prot
Match: WAP53_BOVIN (Telomerase Cajal body protein 1 OS=Bos taurus GN=WRAP53 PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 3.557e-50 Identity = 63/138 (45.65%), Postives = 96/138 (69.57%), Query Frame = 3 Query: 315 LRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQERGVTHVQFSRDGNYLYTGGRKDPYILCWDLRK 728 LR ++R+Y+ +DE+TAA S+ F+P G+++F G+N++VRVF RPGRD E +T ++GQ+GI+S IAFSPT + A GSY ++ +Y ++ L +L G + G+TH+ F DGN ++G RKD +LCWDLR+ Sbjct: 255 LRASFRSYNHLDELTAAHSLCFSPDGSQLFCGFNRTVRVFSTSRPGRDCEVRTTF-AKRQGQSGIISCIAFSPTQP-LYACGSYGRSLGLYTWEDGSPLALLGGHQGGITHLCFHPDGNCFFSGARKDAELLCWDLRQ 390 HSP 2 Score: 88.9669 bits (219), Expect = 3.557e-50 Identity = 43/104 (41.35%), Postives = 64/104 (61.54%), Query Frame = 2 Query: 17 PNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEAS-----LVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATT 313 P NFLKG KW+PDGS LT+S D LRI++LP L + + E + L + EG+++YD+CW+ MS++ P + AS++R++PIH+WDA T Sbjct: 159 PENFLKGCKWAPDGSCILTNSADNILRIYNLPPE----------LYNEGEQLEYAEMAPVLRMVEGDTIYDYCWYSLMSSAQPDTSYVASSSRENPIHIWDAFT 252
BLAST of FC876700 vs. ExPASy Swiss-Prot
Match: GNR1_SCHPO (Guanine nucleotide-binding protein negative regulator 1 OS=Schizosaccharomyces pombe GN=gnr1 PE=1 SV=1) HSP 1 Score: 63.929 bits (154), Expect = 1.991e-19 Identity = 34/99 (34.34%), Postives = 54/99 (54.55%), Query Frame = 2 Query: 17 PNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATT 313 P NF +WSPDGS+ L+ +ED+ L +++P + +S + SY+ E+VY + W+ M DP+S +FA ++RD PI L + TT Sbjct: 45 PLNFFHSSRWSPDGSTILSLTEDQCLNCWNVPFSDLSKKADGPLNFSKHLSYKYQ----SPETVYSYSWYSRMKLDDPSSNLFAVSSRDQPIKLINFTT 139 HSP 2 Score: 53.1434 bits (126), Expect = 1.991e-19 Identity = 37/143 (25.87%), Postives = 59/143 (41.26%), Query Frame = 3 Query: 318 RCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNKE-----GQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQERG--VTHVQFSRDGNYLYTGGRKDPYILCWDLR 725 + +Y D + + + F G + AG + F++ ++ + G K GI S + +P + LA+G+YS IY + + ERG VTH+Q+ DG LY G R I WD+R Sbjct: 143 KASYHMIDHQERYQGSHCLQFTNDGEYLIAGDKNCLHHFNIRTGCKEPVMTTVTHGYKVPLWEFSLKGIQSCFSLNPMDSKTLAVGTYSNRVGIYNDCGRRPCQLEFSIERGNGVTHLQWCEDGEKLYVGSRCSDKIEVWDIR 285 The following BLAST results are available for this feature:
BLAST of FC876700 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876700 ID=FC876700; Name=FC876700; organism=Citrus clementina; type=EST; length=744bpback to top |