FC876724
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876724 vs. ExPASy Swiss-Prot
Match: WAP53_MESAU (Telomerase Cajal body protein 1 OS=Mesocricetus auratus GN=Wrap53 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.523e-37 Identity = 46/100 (46.00%), Postives = 64/100 (64.00%), Query Frame = 2 Query: 23 NFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVV---TEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATT 313 NFLKG KW+PDGS LT+S D TLRI++LP S A +Q Y + V EG+++YD+CW+ MS+S P + AS++R++PIH+WDA T Sbjct: 158 NFLKGCKWAPDGSCILTNSADNTLRIYNLPPELYS--------ATEQVDYAEMVPVLRMVEGDTIYDYCWYSLMSSSQPDTSYVASSSRENPIHIWDAFT 249 HSP 2 Score: 83.9593 bits (206), Expect = 1.523e-37 Identity = 39/74 (52.70%), Postives = 57/74 (77.03%), Query Frame = 3 Query: 315 LRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPT 536 LR ++RAY+ +DE+TAA S+ F+P G+++F G+N++VRVF RPGRD E +T K+GQ+GI+S IAFSP+ Sbjct: 252 LRASFRAYNHLDELTAAHSLCFSPDGSQLFCGFNRTVRVFSTSRPGRDCEVRATF-AKKQGQSGIISCIAFSPS 324
BLAST of FC876724 vs. ExPASy Swiss-Prot
Match: WAP53_MOUSE (Telomerase Cajal body protein 1 OS=Mus musculus GN=Wrap53 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.144e-36 Identity = 42/97 (43.30%), Postives = 60/97 (61.86%), Query Frame = 2 Query: 23 NFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATT 313 NFLKG KW+PDGS LT+S D LRI++LP S D L + EG+++YD+CW+ MS++ P + AS++R++PIH+WDA T Sbjct: 154 NFLKGCKWAPDGSCILTNSADNVLRIYNLPPELYSEQEQV-----DYAEMVPVLRMVEGDTIYDYCWYSLMSSTQPDTSYVASSSRENPIHIWDAFT 245 HSP 2 Score: 83.9593 bits (206), Expect = 2.144e-36 Identity = 39/74 (52.70%), Postives = 57/74 (77.03%), Query Frame = 3 Query: 315 LRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPT 536 LR ++RAY+ +DE+TAA S+ F+P G+++F G+N++VRVF RPGRD E +T K+GQ+GI+S IAFSP+ Sbjct: 248 LRASFRAYNHLDELTAAHSLCFSPDGSQLFCGFNRTVRVFSTSRPGRDCEVRATF-AKKQGQSGIISCIAFSPS 320
BLAST of FC876724 vs. ExPASy Swiss-Prot
Match: WAP53_HUMAN (Telomerase Cajal body protein 1 OS=Homo sapiens GN=WRAP53 PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.636e-36 Identity = 42/99 (42.42%), Postives = 64/99 (64.65%), Query Frame = 2 Query: 17 PNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATT 313 P NFLKG KW+PDGS LT+S D LRI++LP + ++ A+ L + EG+++YD+CW+ MS++ P + AS++R++PIH+WDA T Sbjct: 168 PENFLKGCKWAPDGSCILTNSADNILRIYNLPPE-LYHEGEQVEYAE----MVPVLRMVEGDTIYDYCWYSLMSSAQPDTSYVASSSRENPIHIWDAFT 261 HSP 2 Score: 83.1889 bits (204), Expect = 3.636e-36 Identity = 39/73 (53.42%), Postives = 56/73 (76.71%), Query Frame = 3 Query: 315 LRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSP 533 LR ++RAY+ +DE+TAA S+ F+P G+++F G+N++VRVF RPGRD E +T K+GQ+GI+S IAFSP Sbjct: 264 LRASFRAYNHLDELTAAHSLCFSPDGSQLFCGFNRTVRVFSTARPGRDCEVRATF-AKKQGQSGIISCIAFSP 335
BLAST of FC876724 vs. ExPASy Swiss-Prot
Match: WAP53_BOVIN (Telomerase Cajal body protein 1 OS=Bos taurus GN=WRAP53 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.637e-36 Identity = 43/104 (41.35%), Postives = 64/104 (61.54%), Query Frame = 2 Query: 17 PNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEAS-----LVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATT 313 P NFLKG KW+PDGS LT+S D LRI++LP L + + E + L + EG+++YD+CW+ MS++ P + AS++R++PIH+WDA T Sbjct: 159 PENFLKGCKWAPDGSCILTNSADNILRIYNLPPE----------LYNEGEQLEYAEMAPVLRMVEGDTIYDYCWYSLMSSAQPDTSYVASSSRENPIHIWDAFT 252 HSP 2 Score: 83.1889 bits (204), Expect = 3.637e-36 Identity = 38/74 (51.35%), Postives = 57/74 (77.03%), Query Frame = 3 Query: 315 LRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPT 536 LR ++R+Y+ +DE+TAA S+ F+P G+++F G+N++VRVF RPGRD E +T ++GQ+GI+S IAFSPT Sbjct: 255 LRASFRSYNHLDELTAAHSLCFSPDGSQLFCGFNRTVRVFSTSRPGRDCEVRTTF-AKRQGQSGIISCIAFSPT 327
BLAST of FC876724 vs. ExPASy Swiss-Prot
Match: WAP53_RAT (Telomerase Cajal body protein 1 OS=Rattus norvegicus GN=Wrap53 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 3.638e-36 Identity = 42/97 (43.30%), Postives = 63/97 (64.95%), Query Frame = 2 Query: 23 NFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATT 313 NFLKG KW+PDGS LT+S D LRI++LP ++ + S D L + EG+++YD+CW+ MS++ P + AS++R++PIH+WDA T Sbjct: 154 NFLKGCKWAPDGSCILTNSADNVLRIYNLPP-----ELYSESEQVDYAEMVPVLRMVEGDTIYDYCWYSLMSSTQPDTSYVASSSRENPIHIWDAFT 245 HSP 2 Score: 82.8037 bits (203), Expect = 3.638e-36 Identity = 38/73 (52.05%), Postives = 56/73 (76.71%), Query Frame = 3 Query: 315 LRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSP 533 LR ++RAY+ +DE+TAA S+ F+P G+++F G+N++VRVF RPGRD E +T K+GQ+GI+S +AFSP Sbjct: 248 LRASFRAYNHLDELTAAHSLCFSPDGSQLFCGFNRTVRVFSTSRPGRDCEVRTTF-AKKQGQSGIISCLAFSP 319 The following BLAST results are available for this feature:
BLAST of FC876724 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876724 ID=FC876724; Name=FC876724; organism=Citrus clementina; type=EST; length=538bpback to top |