FC876861
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876861 vs. ExPASy Swiss-Prot
Match: AB8C_ARATH (ABC transporter C family member 8 OS=Arabidopsis thaliana GN=ABCC8 PE=2 SV=2) HSP 1 Score: 238.424 bits (607), Expect = 3.076e-62 Identity = 120/142 (84.51%), Postives = 132/142 (92.96%), Query Frame = -2 Query: 323 DDEIWKALEKCQRKTIISSLRNKLDSS-VSDEGENWSAGQRQLLCLGRVLLKRNRILVLDEANASIDSATDAILQRIIRQEFSNCTVITVAHRVPTVIDSDMVMVLSYGKLLEYDEPSKVMETNSSFSKLVAEYWSSCRRNS 745 DDEIWKALEKCQ KT IS+L NKLDSS VSDEGENWS GQRQL CLGRVLLKRN+ILVLDEA ASIDSATDAI+QRIIR+EF++CTVITVAHRVPTVIDSDMVMVLS+G L+EY+EPSK+MET+S FSKLVAEYW+SCR NS Sbjct: 1148 DDEIWKALEKCQLKTTISNLPNKLDSSEVSDEGENWSVGQRQLFCLGRVLLKRNKILVLDEATASIDSATDAIIQRIIREEFADCTVITVAHRVPTVIDSDMVMVLSFGDLVEYNEPSKLMETDSYFSKLVAEYWASCRGNS 1289
BLAST of FC876861 vs. ExPASy Swiss-Prot
Match: AB14C_ARATH (ABC transporter C family member 14 OS=Arabidopsis thaliana GN=ABCC14 PE=1 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.298e-44 Identity = 82/133 (61.65%), Postives = 109/133 (81.95%), Query Frame = -2 Query: 347 DDEIWKALEKCQRKTIISSLRNKLDSSVSDEGENWSAGQRQLLCLGRVLLKRNRILVLDEANASIDSATDAILQRIIRQEFSNCTVITVAHRVPTVIDSDMVMVLSYGKLLEYDEPSKVMETNSSFSKLVAEY 745 D+EIWK+LE+CQ K +++S KLDS V+D GENWS GQRQLLCLGRV+LKR+RIL LDEA AS+DS TDA++Q+IIR++FS+CT+I++AHR+PTV+D D V+V+ GK EYD P +++E S F+ LV EY Sbjct: 1400 DEEIWKSLERCQLKDVVASKPEKLDSLVADNGENWSVGQRQLLCLGRVMLKRSRILFLDEATASVDSQTDAMIQKIIREDFSDCTIISIAHRIPTVMDCDRVLVIDAGKAKEYDSPVRLLERQSLFAALVQEY 1532
BLAST of FC876861 vs. ExPASy Swiss-Prot
Match: AB4C_ARATH (ABC transporter C family member 4 OS=Arabidopsis thaliana GN=ABCC4 PE=1 SV=2) HSP 1 Score: 175.637 bits (444), Expect = 2.449e-43 Identity = 78/133 (58.65%), Postives = 109/133 (81.95%), Query Frame = -2 Query: 347 DDEIWKALEKCQRKTIISSLRNKLDSSVSDEGENWSAGQRQLLCLGRVLLKRNRILVLDEANASIDSATDAILQRIIRQEFSNCTVITVAHRVPTVIDSDMVMVLSYGKLLEYDEPSKVMETNSSFSKLVAEY 745 D+EIWK+LE+CQ K ++++ KLDS V D GENWS GQRQLLCLGRV+LKR+R+L LDEA AS+DS TDA++Q+IIR++F++CT+I++AHR+PTV+D D V+V+ GK E+D P++++E S F+ LV EY Sbjct: 1377 DEEIWKSLERCQLKDVVATKPEKLDSLVVDNGENWSVGQRQLLCLGRVMLKRSRLLFLDEATASVDSQTDAVIQKIIREDFASCTIISIAHRIPTVMDGDRVLVIDAGKAKEFDSPARLLERPSLFAALVQEY 1509
BLAST of FC876861 vs. ExPASy Swiss-Prot
Match: AB10C_ARATH (ABC transporter C family member 10 OS=Arabidopsis thaliana GN=ABCC10 PE=2 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 2.449e-43 Identity = 84/136 (61.76%), Postives = 107/136 (78.68%), Query Frame = -2 Query: 341 DDEIWKALEKCQRKTIISSLRNKLDSSVSDEGENWSAGQRQLLCLGRVLLKRNRILVLDEANASIDSATDAILQRIIRQEFSNCTVITVAHRVPTVIDSDMVMVLSYGKLLEYDEPSKVM-ETNSSFSKLVAEYWS 745 D EIW+ L KCQ K ++ N LDS V ++G NWS GQRQL CLGR +L+R+R+LVLDEA ASID+ATD ILQ+ IR+EF++CTVITVAHR+PTV+D MV+ +S G+++EYDEP K+M + NS F KLV EYWS Sbjct: 1246 DAEIWEVLGKCQLKEVVQEKENGLDSLVVEDGSNWSMGQRQLFCLGRAVLRRSRVLVLDEATASIDNATDLILQKTIRREFADCTVITVAHRIPTVMDCTMVLSISDGRIVEYDEPMKLMKDENSLFGKLVKEYWS 1381
BLAST of FC876861 vs. ExPASy Swiss-Prot
Match: AB3C_ARATH (ABC transporter C family member 3 OS=Arabidopsis thaliana GN=ABCC3 PE=1 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 4.177e-43 Identity = 85/136 (62.50%), Postives = 112/136 (82.35%), Query Frame = -2 Query: 341 DDEIWKALEKCQRKTIISSLRNKLDSSVSDEGENWSAGQRQLLCLGRVLLKRNRILVLDEANASIDSATDAILQRIIRQEFSNCTVITVAHRVPTVIDSDMVMVLSYGKLLEYDEPSKVME-TNSSFSKLVAEYWS 745 DD+IW+AL+KCQ + KLDSSVS+ G+NWS GQRQL+CLGRVLLKR++ILVLDEA AS+D+ATD ++Q+ +R+ FS+CTVIT+AHR+ +VIDSDMV++LS G + EYD P +++E +SSFSKLVAEY S Sbjct: 1372 DDQIWEALDKCQLGDEVRKKEQKLDSSVSENGDNWSMGQRQLVCLGRVLLKRSKILVLDEATASVDTATDNLIQKTLREHFSDCTVITIAHRISSVIDSDMVLLLSNGIIEEYDTPVRLLEDKSSSFSKLVAEYTS 1507
BLAST of FC876861 vs. ExPASy Swiss-Prot
Match: AB7C_ARATH (ABC transporter C family member 7 OS=Arabidopsis thaliana GN=ABCC7 PE=2 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 3.536e-42 Identity = 82/137 (59.85%), Postives = 110/137 (80.29%), Query Frame = -2 Query: 338 DDEIWKALEKCQRKTIISSLRNKLDSSVSDEGENWSAGQRQLLCLGRVLLKRNRILVLDEANASIDSATDAILQRIIRQEFSNCTVITVAHRVPTVIDSDMVMVLSYGKLLEYDEPSKVME-TNSSFSKLVAEYWSS 745 DD+IW+AL+KCQ I KLDS VS+ G+NWS GQRQL+CLGRVLLKR+++L+LDEA AS+D+ATD ++Q +RQ FS CTVIT+AHR+ +VIDSDMV++L G + E+D P++++E +SSFSKLVAEY +S Sbjct: 1344 DDQIWEALDKCQLGDEIRKKELKLDSPVSENGQNWSVGQRQLVCLGRVLLKRSKVLILDEATASVDTATDTLIQETLRQHFSGCTVITIAHRISSVIDSDMVLLLDQGLIEEHDSPARLLEDKSSSFSKLVAEYTAS 1480
BLAST of FC876861 vs. ExPASy Swiss-Prot
Match: AB15C_ARATH (Putative ABC transporter C family member 15 OS=Arabidopsis thaliana GN=ABCC15 PE=5 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 6.669e-41 Identity = 82/143 (57.34%), Postives = 112/143 (78.32%), Query Frame = -2 Query: 320 DDEIWKALEKCQRKTIISSLRNKLDSSVSDEGENWSAGQRQLLCLGRVLLKRNRILVLDEANASIDSATDAILQRIIRQEFSNCTVITVAHRVPTVIDSDMVMVLSYGKLLEYDEPSKVMETNSS-FSKLVAEYWSSCRRNSY 745 D EIW+AL+KCQ +I + KLD++V + GENWS GQRQL+CLGRVLLK++ ILVLDEA AS+DSATD ++Q+II QEF + TV+T+AHR+ TVI+SD+V+VLS G++ E+D P+K+++ S FSKL+ EY S R N + Sbjct: 889 DREIWEALDKCQLGDVIRAKDEKLDATVVENGENWSVGQRQLVCLGRVLLKKSNILVLDEATASVDSATDGVIQKIINQEFKDRTVVTIAHRIHTVIESDLVLVLSDGRIAEFDSPAKLLQREDSFFSKLIKEY--SLRSNHF 1029
BLAST of FC876861 vs. ExPASy Swiss-Prot
Match: AB9C_ARATH (ABC transporter C family member 9 OS=Arabidopsis thaliana GN=ABCC9 PE=2 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 1.940e-40 Identity = 80/143 (55.94%), Postives = 112/143 (78.32%), Query Frame = -2 Query: 320 DDEIWKALEKCQRKTIISSLRNKLDSSVSDEGENWSAGQRQLLCLGRVLLKRNRILVLDEANASIDSATDAILQRIIRQEFSNCTVITVAHRVPTVIDSDMVMVLSYGKLLEYDEPSKVMETNSS-FSKLVAEYWSSCRRNSY 745 D EIW+A++KCQ +I + +LD++V + GENWS GQRQL+CLGRVLLK++ ILVLDEA AS+DSATD ++Q+II QEF + TV+T+AHR+ TVI+SD+V+VLS G++ E+D P+K+++ S FSKL+ EY S R N + Sbjct: 1342 DHEIWEAIDKCQLGDVIRAKDERLDATVVENGENWSVGQRQLVCLGRVLLKKSNILVLDEATASVDSATDGVIQKIINQEFKDRTVVTIAHRIHTVIESDLVLVLSDGRIAEFDSPAKLLQREDSFFSKLIKEY--SLRSNHF 1482
BLAST of FC876861 vs. ExPASy Swiss-Prot
Match: AB6C_ARATH (ABC transporter C family member 6 OS=Arabidopsis thaliana GN=ABCC6 PE=2 SV=2) HSP 1 Score: 165.622 bits (418), Expect = 2.534e-40 Identity = 80/142 (56.34%), Postives = 108/142 (76.06%), Query Frame = -2 Query: 323 DDEIWKALEKCQRKTIISSLRNKLDSSVSDEGENWSAGQRQLLCLGRVLLKRNRILVLDEANASIDSATDAILQRIIRQEFSNCTVITVAHRVPTVIDSDMVMVLSYGKLLEYDEPSKVMETNSS-FSKLVAEYWSSCRRNS 745 DD+IW+AL+ CQ + KLDS VS+ G+NWS GQRQL+CLGRVLLKR+++LVLDEA ASID+ATD ++Q +R F++CTVIT+AHR+ +VIDSDMV++L G + E+D P++++E SS FSK VAEY +S S Sbjct: 1322 DDQIWEALDNCQLGDEVRKKELKLDSPVSENGQNWSVGQRQLVCLGRVLLKRSKLLVLDEATASIDTATDNLIQETLRHHFADCTVITIAHRISSVIDSDMVLLLDQGLIKEHDSPARLLEDRSSLFSKFVAEYTTSSESKS 1463
BLAST of FC876861 vs. ExPASy Swiss-Prot
Match: AB5C_ARATH (ABC transporter C family member 5 OS=Arabidopsis thaliana GN=ABCC5 PE=2 SV=2) HSP 1 Score: 160.614 bits (405), Expect = 8.152e-39 Identity = 79/136 (58.09%), Postives = 106/136 (77.94%), Query Frame = -2 Query: 341 DDEIWKALEKCQRKTIISSLRNKLDSSVSDEGENWSAGQRQLLCLGRVLLKRNRILVLDEANASIDSATDAILQRIIRQEFSNCTVITVAHRVPTVIDSDMVMVLSYGKLLEYDEPSKVMETNSS-FSKLVAEYWS 745 DD+IW+AL+K Q ++ KLDS V + G+NWS GQRQL+ LGR LLK+ +ILVLDEA AS+D+ATD ++Q+IIR EF +CTV T+AHR+PTVIDSD+V+VLS G++ E+D P++++E SS F KLV EY S Sbjct: 1371 DDKIWEALDKSQLGDVVRGKDLKLDSPVLENGDNWSVGQRQLVSLGRALLKQAKILVLDEATASVDTATDNLIQKIIRTEFEDCTVCTIAHRIPTVIDSDLVLVLSDGRVAEFDTPARLLEDKSSMFLKLVTEYSS 1506 The following BLAST results are available for this feature:
BLAST of FC876861 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 368
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876861 ID=FC876861; Name=FC876861; organism=Citrus clementina; type=EST; length=746bpback to top |