FC877016

Overview
NameFC877016
Unique NameFC877016
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length758
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9541 contig Ccv1_Contig9541:304..1061. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC877016 vs. ExPASy Swiss-Prot
Match: CHAC2_DANRE (Cation transport regulator-like protein 2 OS=Danio rerio GN=chac2 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 6.255e-18
Identity = 61/149 (40.94%), Postives = 80/149 (53.69%), Query Frame = 3
Query:    9 DHRGTPQHPARTCTLEKSQETICWGVAYCVRGGPEKERLAMEYLERRECQYDSKTLVDFYREGEPSQPALTGVILFTSTPDKVSNNYYLGPAPLEEMARQIATAVGPCGNNIDYLFKLEKAMFDIGHE--DDYILELANELRKELGTAE 449
            DHRG P  P R  TL +  E   WGVAY +  G E+E    EYL+ RE        V F+ + E  QP +   +L+  + D   N  YLGPAPLE +A+QI  +VGP G N DYLF+L  A+  +  E  DD++  L   L K+L   E
Sbjct:   38 DHRGVPGKPGRVVTLIEDPEGCVWGVAYKLPSGQEQE--VKEYLDYREKGGYGVITVTFHPKDEQQQP-MQDTLLYIGSCD---NPNYLGPAPLETIAQQIVKSVGPSGKNTDYLFELADALRQLVPEDLDDHLFSL-ERLVKQLQEQE 179          
BLAST of FC877016 vs. ExPASy Swiss-Prot
Match: CHAC2_XENLA (Cation transport regulator-like protein 2 OS=Xenopus laevis GN=chac2 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.393e-17
Identity = 61/151 (40.40%), Postives = 82/151 (54.30%), Query Frame = 3
Query:    9 DHRGTPQHPARTCTLEKSQETICWGVAYCVRGGPEKERLAMEYLERRECQYDSKTLVDFYREGEPSQPALTGVILFTSTPDKVSNNYYLGPAPLEEMARQIATAVGPCGNNIDYLFKLEKAMFDIGHED-DYILELANELRKELGTAEKGI 458
            DHRG P  P R  TL +  E   WGVAY +  G E+E  A  YL+ RE      + V FY +    QP    V+L+  T D   N  YLGPAPLE++A QI  AVGP G N +YLF+L  ++ ++  ED D  L    +L ++L  A + +
Sbjct:   38 DHRGVPGKPGRVVTLVEDPEGCVWGVAYRLPEGKEEEVKA--YLDFREKGGYRTSTVVFYPKDPSIQPF--NVLLYIGTCD---NPNYLGPAPLEDIAEQILNAVGPSGRNTEYLFELANSLRNLVPEDADEHLFSLEKLVRQLSEAHRNL 181          
BLAST of FC877016 vs. ExPASy Swiss-Prot
Match: CHAC2_CHICK (Cation transport regulator-like protein 2 OS=Gallus gallus GN=chac2 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.104e-17
Identity = 57/129 (44.19%), Postives = 71/129 (55.04%), Query Frame = 3
Query:    9 DHRGTPQHPARTCTLEKSQETICWGVAYCVRGGPEKERLAMEYLERRECQYDSKTLVDFYREGEPSQPALTGVILFTSTPDKVSNNYYLGPAPLEEMARQIATAVGPCGNNIDYLFKLEKAMFDIGHED 395
            DHRG P  P R  TL +  E   WGVAY +  G E E  A  YL+ RE      T V FY +    +P    V+L+  T D   N  YLGPAPL+E+A QI  AVGP G N +YLF+L  +M ++  ED
Sbjct:   38 DHRGVPGKPGRVVTLVEDPEGCVWGVAYRLPAGQECEVKA--YLDFREKGGYRTTTVVFYPKDSSIKPF--DVLLYIGTRD---NPNYLGPAPLQEIAEQIIDAVGPSGRNTEYLFELANSMRNLVPED 159          
BLAST of FC877016 vs. ExPASy Swiss-Prot
Match: CHAC2_HUMAN (Cation transport regulator-like protein 2 OS=Homo sapiens GN=CHAC2 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.646e-16
Identity = 56/145 (38.62%), Postives = 79/145 (54.48%), Query Frame = 3
Query:    9 DHRGTPQHPARTCTLEKSQETICWGVAYCVRGGPEKERLAMEYLERRECQYDSKTLVDFYREGEPSQPALTGVILFTSTPDKVSNNYYLGPAPLEEMARQIATAVGPCGNNIDYLFKLEKAMFDIGHE--DDYILELANELRKEL 437
            DHRG P  P R  TL +      WGVAY +  G E+E  A  YL+ RE      T V FY +   ++P    V+L+  T D   N  YLGPAPLE++A QI  A GP G N +YLF+L  ++ ++  E  D+++  L   +++ L
Sbjct:   38 DHRGVPGKPGRVVTLVEDPAGCVWGVAYRLPVGKEEEVKA--YLDFREKGGYRTTTVIFYPKDPTTKPF--SVLLYIGTCD---NPDYLGPAPLEDIAEQIFNAAGPSGRNTEYLFELANSIRNLVPEEADEHLFALEKLVKERL 175          
BLAST of FC877016 vs. ExPASy Swiss-Prot
Match: CHAC2_RAT (Cation transport regulator-like protein 2 OS=Rattus norvegicus GN=Chac2 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.703e-15
Identity = 55/145 (37.93%), Postives = 77/145 (53.10%), Query Frame = 3
Query:    9 DHRGTPQHPARTCTLEKSQETICWGVAYCVRGGPEKERLAMEYLERRECQYDSKTLVDFYREGEPSQPALTGVILFTSTPDKVSNNYYLGPAPLEEMARQIATAVGPCGNNIDYLFKLEKAMFDIGHE--DDYILELANELRKEL 437
            DHRG P  P R  TL +      WGVAY +  G E+E     YL+ RE      T V FY +   ++P    V+L+  T D   N  YLGPAPLE++A QI  A GP G N +YLF+L  ++  +  E  D+++  L   +++ L
Sbjct:   38 DHRGVPGKPGRVVTLVEDPGGSVWGVAYKLPVGKEEE--VKTYLDFREKGGYRTTTVIFYPKDSTTKPF--SVLLYIGTCD---NPNYLGPAPLEDIAEQIFNAAGPSGRNTEYLFELADSIRKLVPEDADEHLFSLEKLVKERL 175          
BLAST of FC877016 vs. ExPASy Swiss-Prot
Match: CHAC2_MOUSE (Cation transport regulator-like protein 2 OS=Mus musculus GN=Chac2 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.703e-15
Identity = 55/145 (37.93%), Postives = 77/145 (53.10%), Query Frame = 3
Query:    9 DHRGTPQHPARTCTLEKSQETICWGVAYCVRGGPEKERLAMEYLERRECQYDSKTLVDFYREGEPSQPALTGVILFTSTPDKVSNNYYLGPAPLEEMARQIATAVGPCGNNIDYLFKLEKAMFDIGHE--DDYILELANELRKEL 437
            DHRG P  P R  TL +      WGVAY +  G E+E     YL+ RE      T V FY +   ++P    V+L+  T D   N  YLGPAPLE++A QI  A GP G N +YLF+L  ++  +  E  D+++  L   +++ L
Sbjct:   38 DHRGVPGKPGRVVTLVEDPGGSVWGVAYKLPVGKEEE--VKTYLDFREKGGYRTTTVIFYPKDSTTKPF--SVLLYIGTCD---NPNYLGPAPLEDIAEQIFNAAGPSGRNTEYLFELADSVRKLVPEDADEHLFSLEKLVKERL 175          
BLAST of FC877016 vs. ExPASy Swiss-Prot
Match: CHAC1_MOUSE (Cation transport regulator-like protein 1 OS=Mus musculus GN=Chac1 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.082e-13
Identity = 51/124 (41.13%), Postives = 67/124 (54.03%), Query Frame = 3
Query:   12 HRGTPQHPARTCTLEKSQETICWGVAYCVRGGPEKERLAMEYLERREC---QYDSKTLVDFYREGEPSQPALTGVILFTSTPDKVSNNYYLGPAPLEEMARQIATAVGPCGNNIDYLFKLEKAM 374
            HRG+ + P R  TL +  E   WGVAY VRG  E+   A++YL  RE     YD+K  V FY +  P QP     + + +TP    N  YLGPAP E +A QI    G  G+N++YL +L   M
Sbjct:   72 HRGSDKMPGRVVTLLEDHEGCTWGVAYQVRG--EQVNEALKYLNVREAVLGGYDTKE-VTFYPQDTPDQPLT--ALAYVATP---QNPGYLGPAPEEVIATQILACRGFSGHNLEYLLRLADFM 187          
BLAST of FC877016 vs. ExPASy Swiss-Prot
Match: CHAC1_HUMAN (Cation transport regulator-like protein 1 OS=Homo sapiens GN=CHAC1 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.059e-13
Identity = 50/124 (40.32%), Postives = 67/124 (54.03%), Query Frame = 3
Query:   12 HRGTPQHPARTCTLEKSQETICWGVAYCVRGGPEKERLAMEYLERRECQ---YDSKTLVDFYREGEPSQPALTGVILFTSTPDKVSNNYYLGPAPLEEMARQIATAVGPCGNNIDYLFKLEKAM 374
            HRG+ + P R  TL +  E   WGVAY V+G  E+   A++YL  RE     YD+K  V FY +  P QP     + + +TP    N  YLGPAP E +A QI    G  G+N++YL +L   M
Sbjct:   71 HRGSDKMPGRVVTLLEDHEGCTWGVAYQVQG--EQVSKALKYLNVREAVLGGYDTKE-VTFYPQDAPDQPLKA--LAYVATPQ---NPGYLGPAPEEAIATQILACRGFSGHNLEYLLRLADFM 186          
BLAST of FC877016 vs. ExPASy Swiss-Prot
Match: CHAC2_BOVIN (Cation transport regulator-like protein 2 OS=Bos taurus GN=CHAC2 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.302e-12
Identity = 53/145 (36.55%), Postives = 74/145 (51.03%), Query Frame = 3
Query:    9 DHRGTPQHPARTCTLEKSQETICWGVAYCVRGGPEKERLAMEYLERRECQYDSKTLVDFYREGEPSQPALTGVILFTSTPDKVSNNYYLGPAPLEEMARQIATAVGPCGNNIDYLFKLEKAMFDIGHE--DDYILELANELRKEL 437
            DHRG P   +             WGVAY +  G E+E  A  YL+ RE      T V FY +   ++P    V+L+  T D   N  YLGPAPLE++A QI  A GP G N +YLF+L  +M  +  E  D+++  L   +++ L
Sbjct:   38 DHRGVPGKGS------------VWGVAYKLPVGKEEEVKA--YLDFREKGGYRTTTVIFYPKDSTTEPF--SVLLYIGTRD---NPNYLGPAPLEDIAEQIFNAAGPSGKNTEYLFELANSMRSLVPEDADEHLFSLEKLVKERL 163          
BLAST of FC877016 vs. ExPASy Swiss-Prot
Match: CHAC1_DANRE (Cation transport regulator-like protein 1 OS=Danio rerio GN=chac1 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.007e-12
Identity = 47/123 (38.21%), Postives = 63/123 (51.22%), Query Frame = 3
Query:   12 HRGTPQHPARTCTLEKSQETICWGVAYCVRGGPEKERLAMEYLERRECQYDS--KTLVDFYREGEPSQPALTGVILFTSTPDKVSNNYYLGPAPLEEMARQIATAVGPCGNNIDYLFKLEKAM 374
            HRG  + P R  TL +  +   WGVA+ V G   +E L  +YL  RE          VDF+  G    P     +++ +TPD   N  YLGPA  EE+A QIA   G  G+NI+YL +L + M
Sbjct:   51 HRGDDEMPGRVVTLIEEDDVCTWGVAFEVTGSQMEESL--KYLNVREAVRGGYLTRAVDFFPRGTNQPPVQA--LVYIATPD---NPIYLGPASTEEIASQIAVCKGNSGHNIEYLLRLAEFM 166          
The following BLAST results are available for this feature:
BLAST of FC877016 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
CHAC2_DANRE6.255e-1840.94Cation transport regulator-like protein 2 OS=Danio... [more]
CHAC2_XENLA1.393e-1740.40Cation transport regulator-like protein 2 OS=Xenop... [more]
CHAC2_CHICK3.104e-1744.19Cation transport regulator-like protein 2 OS=Gallu... [more]
CHAC2_HUMAN7.646e-1638.62Cation transport regulator-like protein 2 OS=Homo ... [more]
CHAC2_RAT1.703e-1537.93Cation transport regulator-like protein 2 OS=Rattu... [more]
CHAC2_MOUSE1.703e-1537.93Cation transport regulator-like protein 2 OS=Mus m... [more]
CHAC1_MOUSE2.082e-1341.13Cation transport regulator-like protein 1 OS=Mus m... [more]
CHAC1_HUMAN6.059e-1340.32Cation transport regulator-like protein 1 OS=Homo ... [more]
CHAC2_BOVIN2.302e-1236.55Cation transport regulator-like protein 2 OS=Bos t... [more]
CHAC1_DANRE3.007e-1238.21Cation transport regulator-like protein 1 OS=Danio... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAN1DH07RM1 EHR Citrus clementina cDNA clone KN0AAN1DH07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877016 ID=FC877016; Name=FC877016; organism=Citrus clementina; type=EST; length=758bp
GCACGAGGGATCACAGGGGTACACCTCAACACCCGGCTAGAACTTGCACG
CTGGAAAAATCTCAAGAAACCATTTGTTGGGGTGTTGCTTATTGTGTCCG
AGGAGGTCCTGAAAAGGAAAGACTCGCTATGGAGTATTTGGAACGAAGAG
AATGCCAGTACGACTCTAAGACCCTTGTAGACTTTTACAGGGAAGGGGAG
CCTTCACAGCCGGCTCTAACTGGGGTTATACTTTTCACGTCTACTCCAGA
CAAAGTATCAAACAACTATTATCTGGGGCCTGCTCCATTGGAGGAAATGG
CTAGGCAAATTGCAACGGCTGTCGGACCCTGTGGAAACAATATAGACTAC
CTTTTCAAGTTGGAGAAGGCCATGTTTGATATTGGTCATGAGGACGACTA
CATACTAGAGCTGGCAAATGAACTGAGGAAAGAGCTTGGAACTGCTGAAA
AAGGAATTCTCAAGGAGAGGAAGTTGGTTGGGTCATCATCCCGCATGCCG
CTCACAAAATCTCATATTCCAACCCTTCAACTGGGTCTACGCCCTGAGGC
GGTGGCCATGGATTCATAACAACACAACGCTGACAGACACCATAGGCCTA
GGGGACTAATCACAGATATCAAGCAACGTAGCTAAACACAATCGCCATCA
TCTTTGTTTTCTTCTTTTTTTTTTTCAACCTTTTTCCTCACTTTTCAGGA
TGACAACTGAGTGGTTTGGAATTGACAGTTGACGGCTAACCATACCACAT
ACATGTTG
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