FC877027
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC877027 vs. ExPASy Swiss-Prot
Match: TRAD1_MACFA (TRAF-type zinc finger domain-containing protein 1 OS=Macaca fascicularis GN=TRAFD1 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 3.027e-18 Identity = 33/101 (32.67%), Postives = 54/101 (53.47%), Query Frame = 3 Query: 276 DETTKICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAPVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQ 578 D+ T++C +C + IP N +H HC RN+ C +C + P+ E H H V C +C++ +E+ +L H+ CP R+ C C+ L + L EH+ Sbjct: 7 DQETRLCDNCKKEIPVFNFTIHEIHCQRNIGMCPICKEPFPKSDMETHMAAEHCQVTC-KCNKKLEKRLLKKHEETECPLRLAVCQHCDLELSILKLKEHE 106 HSP 2 Score: 29.261 bits (64), Expect = 3.027e-18 Identity = 11/29 (37.93%), Postives = 16/29 (55.17%), Query Frame = 1 Query: 661 EVCGNRTELCHLCNRYIRLRERYNHESRC 747 + CG RTELC C R + +++ H C Sbjct: 107 DYCGARTELCGNCGRNVLVKDLKTHPEVC 135
BLAST of FC877027 vs. ExPASy Swiss-Prot
Match: TRAD1_HUMAN (TRAF-type zinc finger domain-containing protein 1 OS=Homo sapiens GN=TRAFD1 PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 6.652e-18 Identity = 33/101 (32.67%), Postives = 53/101 (52.48%), Query Frame = 3 Query: 276 DETTKICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAPVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQ 578 D+ T++C +C + IP N +H HC RN+ C C + P+ E H H V C +C++ +E+ +L H+ CP R+ C C+ L + L EH+ Sbjct: 7 DQETRLCDNCKKEIPVFNFTIHEIHCQRNIGMCPTCKEPFPKSDMETHMAAEHCQVTC-KCNKKLEKRLLKKHEETECPLRLAVCQHCDLELSILKLKEHE 106 HSP 2 Score: 29.261 bits (64), Expect = 6.652e-18 Identity = 11/29 (37.93%), Postives = 16/29 (55.17%), Query Frame = 1 Query: 661 EVCGNRTELCHLCNRYIRLRERYNHESRC 747 + CG RTELC C R + +++ H C Sbjct: 107 DYCGARTELCGNCGRNVLVKDLKTHPEVC 135
BLAST of FC877027 vs. ExPASy Swiss-Prot
Match: TRAD1_RAT (TRAF-type zinc finger domain-containing protein 1 OS=Rattus norvegicus GN=Trafd1 PE=2 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 6.654e-18 Identity = 33/101 (32.67%), Postives = 51/101 (50.50%), Query Frame = 3 Query: 276 DETTKICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAPVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQ 578 D+ ++C +C + IP N +H HC RN+ C VC + P+ + H H V C +C++ +E+ L H CP R+ C C+ L V L EH+ Sbjct: 7 DQAARLCDNCKKEIPVFNFTIHEIHCQRNIGVCPVCKEPFPKSDMDIHVATEHCQVTC-KCNKKLEKRQLKQHVETECPLRLAVCQHCDLELSVVKLKEHE 106 HSP 2 Score: 33.113 bits (74), Expect = 6.654e-18 Identity = 14/34 (41.18%), Postives = 19/34 (55.88%), Query Frame = 1 Query: 661 EVCGNRTELCHLCNRYIRLRERYNHESRCTGVPE 762 + CG RTELC C R + ++E H + C V E Sbjct: 107 DYCGARTELCGSCGRNVLVKELQTHPAVCGRVEE 140
BLAST of FC877027 vs. ExPASy Swiss-Prot
Match: TRAD1_MOUSE (TRAF-type zinc finger domain-containing protein 1 OS=Mus musculus GN=Trafd1 PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 8.650e-18 Identity = 33/101 (32.67%), Postives = 52/101 (51.49%), Query Frame = 3 Query: 276 DETTKICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAPVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQ 578 D+ +++C +C + IP N +H HC RN+ C VC + P+ + H H V C +C++ +E+ L H CP R+ C C+ L V L EH+ Sbjct: 7 DQASRLCDNCKKEIPVFNFTIHEIHCQRNIGVCPVCKEPFPKSDMDIHMAAEHCQVTC-KCNKKLEKRQLKQHAETECPLRLAVCQHCDLELSVVKLKEHE 106 HSP 2 Score: 32.3426 bits (72), Expect = 8.650e-18 Identity = 14/34 (41.18%), Postives = 18/34 (52.94%), Query Frame = 1 Query: 661 EVCGNRTELCHLCNRYIRLRERYNHESRCTGVPE 762 + CG RTELC C R + ++E H C V E Sbjct: 107 DYCGARTELCGSCGRNVLVKELKTHPEVCGRVEE 140
BLAST of FC877027 vs. ExPASy Swiss-Prot
Match: TRAD1_BOVIN (TRAF-type zinc finger domain-containing protein 1 OS=Bos taurus GN=TRAFD1 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.901e-17 Identity = 33/102 (32.35%), Postives = 54/102 (52.94%), Query Frame = 3 Query: 273 SDETTKICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAPVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQ 578 +D+ T++C +C + IP N +H HC RN+ C VC + P+ E H H V C +C++ +E+ L H+ CP R+ C C+ L + L +H+ Sbjct: 6 NDQDTRLCDNCKKEIPVFNFTIHEIHCQRNIGVCPVCKEPFPKCDMETHMATEHCQVTC-KCNKKLEKRQLKKHEETECPLRLALCQHCDLELSVLKLKDHE 106 HSP 2 Score: 30.0314 bits (66), Expect = 1.901e-17 Identity = 11/29 (37.93%), Postives = 16/29 (55.17%), Query Frame = 1 Query: 661 EVCGNRTELCHLCNRYIRLRERYNHESRC 747 + CG RTELC C R + +++ H C Sbjct: 107 DYCGARTELCGTCGRNVLVKDLKTHPEVC 135
BLAST of FC877027 vs. ExPASy Swiss-Prot
Match: XAF1_HUMAN (XIAP-associated factor 1 OS=Homo sapiens GN=XAF1 PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 5.516e-17 Identity = 34/96 (35.42%), Postives = 51/96 (53.12%), Query Frame = 3 Query: 291 ICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAPVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQ 578 +C +C R + S+N LH A+C R L C C + VP++ EEH H V C+ C ++M++ L HK C +R V C FC+ + L H+ Sbjct: 7 VCRNCKRHVVSANFTLHEAYCLRFLVLCPECEEPVPKETMEEHCKLEHQQVGCTMCQQSMQKSSLEFHKANECQERPVECKFCKLDMQLSKLELHE 102 HSP 2 Score: 30.0314 bits (66), Expect = 5.516e-17 Identity = 12/27 (44.44%), Postives = 15/27 (55.56%), Query Frame = 1 Query: 667 CGNRTELCHLCNRYIRLRERYNHESRC 747 CG+RTELC C ++I R H C Sbjct: 105 CGSRTELCQGCGQFIMHRMLAQHRDVC 131
BLAST of FC877027 vs. ExPASy Swiss-Prot
Match: XAF1_BOVIN (XIAP-associated factor 1 OS=Bos taurus GN=XAF1 PE=2 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 1.668e-15 Identity = 34/98 (34.69%), Postives = 52/98 (53.06%), Query Frame = 3 Query: 288 KICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAPVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFP--LPAVDLAEH 575 ++C +C R + S+++ LH AHC L C C + V + EEH H V C+ C +++ + L H+ + C +R V C FC+ L VDL EH Sbjct: 6 QVCRNCKRRVASNHLGLHEAHCLMYLVLCPECKEPVLQHEMEEHCQGGHQQVGCAMCQQSVPKHSLDSHEAQECQERPVECQFCQLAVRLNKVDLHEH 103 HSP 2 Score: 30.4166 bits (67), Expect = 1.668e-15 Identity = 11/27 (40.74%), Postives = 15/27 (55.56%), Query Frame = 1 Query: 667 CGNRTELCHLCNRYIRLRERYNHESRC 747 CG +TELC C +++ LR H C Sbjct: 105 CGQQTELCPDCGQHVMLRVLARHREEC 131 The following BLAST results are available for this feature:
BLAST of FC877027 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC877027 ID=FC877027; Name=FC877027; organism=Citrus clementina; type=EST; length=858bpback to top |