FC877785
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877785 vs. ExPASy Swiss-Prot
Match: MCM4B_XENLA (DNA replication licensing factor mcm4-B OS=Xenopus laevis GN=mcm4-B PE=1 SV=3) HSP 1 Score: 112.849 bits (281), Expect = 2.481e-24 Identity = 59/202 (29.21%), Postives = 100/202 (49.50%), Query Frame = 1 Query: 259 TPSRSNRRSNGQRHATSPSSTDDVPLSSSEAGDDMDEATPTFVWGTNISVQDVKSAIQMFLKHFRXXXXXXXXXXXXIYKEGKYMRAINRVLEIEGEWIDVDANDVFDYDSDLYNKMVRYPLEVLAIFDIVLMDIVSLINP--LFEKHVQVRIYNLKSSTAMRNLNPSDIEKMVSLKGMIIRCSSIIPEIREAIFRCLVCGY 858 TP+R R D P + + +WGT+++V K Q F++ F E YM+ + + + ++++D + + ++D DLY ++V YP EV+ FD+ +I P + E +QVR YN + MR+LNP DI++++++ GM+IR S IIPE++EA F+C VC + Sbjct: 110 TPARQRPDLGSARKVKQVDLHSDQPAAEELVTSEQSLGQKLVIWGTDVNVATCKEKFQRFVQRFIDPSAKEEDNVGLDLNEPIYMQRLEEINVVGDPFLNIDCDHLRNFDQDLYRQLVCYPQEVIPTFDMAANEIFFERYPDSILEHQIQVRPYNALKTRNMRSLNPEDIDQLITISGMVIRTSQIIPEMQEAFFKCQVCAF 311
BLAST of FC877785 vs. ExPASy Swiss-Prot
Match: MCM4_XENTR (DNA replication licensing factor mcm4 OS=Xenopus tropicalis GN=mcm4 PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 3.240e-24 Identity = 60/202 (29.70%), Postives = 99/202 (49.01%), Query Frame = 1 Query: 259 TPSRSNRRSNGQRHATSPSSTDDVPLSSSEAGDDMDEATPTFVWGTNISVQDVKSAIQMFLKHFRXXXXXXXXXXXXIYKEGKYMRAINRVLEIEGEWIDVDANDVFDYDSDLYNKMVRYPLEVLAIFDIVLMDIVSLINP--LFEKHVQVRIYNLKSSTAMRNLNPSDIEKMVSLKGMIIRCSSIIPEIREAIFRCLVCGY 858 TP+R R D P + + +WGT+++V K Q F++ F E YM+ + + + +++VD + + +D DLY ++V YP EV+ FD+ +I P + E +QVR YN + MR+LNP DI++++++ GM+IR S IIPE++EA F+C VC + Sbjct: 110 TPARQRPDLGSARKVKQVDLHSDQPAAEELVTSEQSLGQKLVIWGTDVNVATCKEKFQRFVQRFIDPLAKEEENVGLDLNEPIYMQRLEEINVVGEPFLNVDCDHLRSFDQDLYRQLVCYPQEVIPTFDMAANEIFFERYPDSILEHQIQVRPYNALKTRNMRSLNPEDIDQLITISGMVIRTSQIIPEMQEAFFKCQVCAF 311
BLAST of FC877785 vs. ExPASy Swiss-Prot
Match: MCM4_SCHPO (DNA replication licensing factor mcm4 OS=Schizosaccharomyces pombe GN=mcm4 PE=1 SV=2) HSP 1 Score: 110.923 bits (276), Expect = 9.428e-24 Identity = 65/238 (27.31%), Postives = 126/238 (52.94%), Query Frame = 1 Query: 205 TPRANQSRFATSSETPNTTPSRSNRRSNGQRHATSPSS-----TDDVPLSSSEAGDDMDEATPTFVWGTNISVQDVKSAIQMFLKHFRXXXXXXXXXXXXIYKEGK---YMRAINRVLEIEGEWIDVDANDVFDYD--SDLYNKMVRYPLEVLAIFDIVLMDIV----------SLINPLFEKHVQVRIYNLKSSTAMRNLNPSDIEKMVSLKGMIIRCSSIIPEIREAIFRCLVCGY 858 TPR+ + R S +TPSR + ++PSS +D + S + ++ + T +WGTN+S+Q+ ++ + FL+ F+ + + Y+ A+ + + E +++D D+ Y LY+++ YP E++ I D + D++ ++N + K ++R +NL+ MR+LNP DI+K++S+KG+++RC+ +IP++++A FRC VCG+ Sbjct: 95 TPRSTR-RGDIHSSVQMSTPSRRREVDPQRPGVSTPSSLLFSGSDALTFSQAHPSSEVADDTVRVIWGTNVSIQESIASFRGFLRGFKKKYRPEYRNELMPPPDAEQLVYIEALRNMRIMGLEILNLDVQDLKHYPPTKKLYHQLYSYPQEIIPIMDQTIKDVMLDLLGTNPPEDVLNDIELKIYKIRPFNLEKCINMRDLNPGDIDKLISIKGLVLRCTPVIPDMKQAFFRCSVCGH 331
BLAST of FC877785 vs. ExPASy Swiss-Prot
Match: MCM4A_XENLA (DNA replication licensing factor mcm4-A OS=Xenopus laevis GN=mcm4-A PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.231e-23 Identity = 58/202 (28.71%), Postives = 99/202 (49.01%), Query Frame = 1 Query: 259 TPSRSNRRSNGQRHATSPSSTDDVPLSSSEAGDDMDEATPTFVWGTNISVQDVKSAIQMFLKHFRXXXXXXXXXXXXIYKEGKYMRAINRVLEIEGEWIDVDANDVFDYDSDLYNKMVRYPLEVLAIFDIVLMDIVSLINP--LFEKHVQVRIYNLKSSTAMRNLNPSDIEKMVSLKGMIIRCSSIIPEIREAIFRCLVCGY 858 TP+R R D P + + +WGT+++V K Q F++ F E YM+ + + + ++++D + + +D DLY ++V YP EV+ FD+ +I P + E +QVR YN + MR+LNP DI++++++ GM+IR S IIPE++E+ F+C VC + Sbjct: 105 TPARQRADLGSARKVKQVDLHSDQPAAEELVTSEQSLGQKLVIWGTDVNVAICKEKFQRFVQRFIDPLAKEEENVGLDLNEPIYMQRLEEINVVGEPFLNIDCDHLRSFDQDLYRQLVCYPQEVIPTFDMAANEIFFERYPDSILEHQIQVRPYNALKTRNMRSLNPEDIDQLITISGMVIRTSQIIPEMQESFFKCQVCAF 306
BLAST of FC877785 vs. ExPASy Swiss-Prot
Match: MCM4_DROME (DNA replication licensing factor MCM4 OS=Drosophila melanogaster GN=dpa PE=1 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 4.679e-23 Identity = 57/188 (30.32%), Postives = 102/188 (54.26%), Query Frame = 1 Query: 313 SSTDDVPLSSSEAGDDMDEATPT---FVWGTNISVQDVKSAIQMFLKHFRXXXXXXXXXXXXI-YKEGKYMRAINRVLEIEGEWIDVDANDVFDYDSDLYNKMVRYPLEVLAIFDIVLMDIVSLINP--LFEKHVQVRIYNLKSSTAMRNLNPSDIEKMVSLKGMIIRCSSIIPEIREAIFRCLVCGY 858 S + +P SE D + E++ VWGTN+ V KS + F+ F I + Y++ + + +E +++++ + +D DLY +++ YP EV+ FD+ + ++ P L E +QVR +N + MR+LNP D+++++S+ GM+IR S++IPE+REA F C +C + Sbjct: 127 SGLEPIPEKGSETTDPVSESSQAPQLVVWGTNVVVSQCKSKFKSFIMRFIDPSAEQDEISENIDVNQPLYLQKLEEIHTLEEPYLNLNCAHLKTFDQDLYRQLICYPQEVIPGFDMAINEMFFERYPAALLEHQIQVRPFNADKTRNMRSLNPEDMDQLISISGMVIRSSNVIPEMREAFFSCNICSF 314
BLAST of FC877785 vs. ExPASy Swiss-Prot
Match: MCM4_HUMAN (DNA replication licensing factor MCM4 OS=Homo sapiens GN=MCM4 PE=1 SV=5) HSP 1 Score: 106.686 bits (265), Expect = 1.778e-22 Identity = 55/184 (29.89%), Postives = 98/184 (53.26%), Query Frame = 1 Query: 313 SSTDDVPLSSSEAGDDMDEATPTFVWGTNISVQDVKSAIQMFLKHFRXXXXXXXXXXXXIYKEGKYMRAINRVLEIEGEWIDVDANDVFDYDSDLYNKMVRYPLEVLAIFDIVLMDIVSLINP--LFEKHVQVRIYNLKSSTAMRNLNPSDIEKMVSLKGMIIRCSSIIPEIREAIFRCLVCGY 858 ++ +D+ S G + +WGT+++V K Q FL+ F E YM+ + + I +++V+ + +D +LY +++ YP EV+ FD+ + +I P + E +QVR +N + MRNLNP DI++++++ GM+IR S +IPE++EA F+C VC + Sbjct: 134 AAAEDIVASEQSLGQKL------VIWGTDVNVAACKENFQRFLQRFIDPLAKEEENVGIDITEPLYMQRLGEINVIGEPFLNVNCEHIKSFDKNLYRQLISYPQEVIPTFDMAVNEIFFDRYPDSILEHQIQVRPFNALKTKNMRNLNPEDIDQLITISGMVIRTSQLIPEMQEAFFQCQVCAH 311
BLAST of FC877785 vs. ExPASy Swiss-Prot
Match: MCM4_MOUSE (DNA replication licensing factor MCM4 OS=Mus musculus GN=Mcm4 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 4.380e-21 Identity = 52/161 (32.30%), Postives = 92/161 (57.14%), Query Frame = 1 Query: 385 VWGTNISVQDVKSAIQMFLKHFRXXXXXXXXXXXXIYKEGKYMRAINRVLEIEGE-WIDVDANDVFDYDSDLYNKMVRYPLEVLAIFDIVLMDIVSLINP--LFEKHVQVRIYNLKSSTAMRNLNPSDIEKMVSLKGMIIRCSSIIPEIREAIFRCLVCGY 858 +WGT+++V K Q FL+ F + YM+ + + I GE +++V+ + + +LY +++ YP EV+ FD+ + +I P + E +QVR +N + +MRNLNP DI++++++ GM+IR S +IPE++EA F+C VC + Sbjct: 151 IWGTDVNVATCKENFQRFLQCFTDPLAKEEENVGIDITQPLYMQQLGEI-NITGEPFLNVNCEHIKSFSKNLYRQLISYPQEVIPTFDMAVNEIFFDRYPDSILEHQIQVRPFNALKTKSMRNLNPEDIDQLITISGMVIRTSQLIPEMQEAFFQCQVCAH 310
BLAST of FC877785 vs. ExPASy Swiss-Prot
Match: CDC54_YEAST (Cell division control protein 54 OS=Saccharomyces cerevisiae GN=CDC54 PE=1 SV=2) HSP 1 Score: 101.679 bits (252), Expect = 5.720e-21 Identity = 60/199 (30.15%), Postives = 107/199 (53.77%), Query Frame = 1 Query: 313 SSTDDVPLSSSEAGDDMDEATPTFVWGTNISVQDVKSAIQMFLKHFRXXXXXXXXXXXXIY-----KEGKYMRAINRVLEIEGEWIDVDANDVFDYDS--DLYNKMVRYPLEVLAIFDIVLMD-IVSLI---------NPLFEKHVQVRIYNLKSSTAMRNLNPSDIEKMVSLKGMIIRCSSIIPEIREAIFRCLVCGY 858 S + + SSS A +WGTN+S+Q+ + + FL F+ +E Y++ +N + E+ +++DA ++ Y DLY++++ YP EV++I D + D +VSLI + + K +VR YN+ S MR LNP+DI+K+++LKG+++R + +IP+++ A F+C VC + Sbjct: 156 SGVNTLDTSSSSAPPSEASEPLRIIWGTNVSIQECTTNFRNFLMSFKYKFRKILDEREEFINNTTDEELYYIKQLNEMRELGTSNLNLDARNLLAYKQTEDLYHQLLNYPQEVISIMDQTIKDCMVSLIVDNNLDYDLDEIETKFYKVRPYNVGSCKGMRELNPNDIDKLINLKGLVLRSTPVIPDMKVAFFKCNVCDH 354 The following BLAST results are available for this feature:
BLAST of FC877785 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC877785 ID=FC877785; Name=FC877785; organism=Citrus clementina; type=EST; length=865bpback to top |