FC877848
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC877848 vs. ExPASy Swiss-Prot
Match: GI1L2_ARATH (Probable gibberellin receptor GID1L2 OS=Arabidopsis thaliana GN=GID1L2 PE=1 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 2.000e-21 Identity = 79/253 (31.23%), Postives = 109/253 (43.08%), Query Frame = 2 Query: 50 LPLLFYVRGGGFCGQSAFGPRYHNFCSVFSAQANAIVVSVEYGNFPDRPIPACYEDSWAALNWVASHAGGNGPEPWLNDHADFG-KVLIGGASAGGNIAHTLAFRVGSIGLPCVKLVGVIMVHPFFGG----------------TSPEEDATWLYMCPTNAGLQDPRLK---PPAEDLARLGCERVLIFVAEKDFLKPVAMNYYEDLKKSGWKGTVDLFETHGEGHSFYF----DNLKCEKAVELINKFVSFI 736 +P+L + GG F SA Y FC +VVSV+Y P+ P Y+D W ALNWV S WL D V + G S+GGNIAH +A R + G VK++G I++HP FGG T + D W P P P + L + + L+ VA D ++ + Y + LKK+G + V+L FYF D+ C +E +NKFV I Sbjct: 106 VPVLIFFHGGSFTHSSANSAIYDTFCRRLVTICGVVVVSVDYRRSPEHRYPCAYDDGWNALNWVKSRV-------WLQSGKDSNVYVYLAGDSSGGNIAHNVAVRATNEG---VKVLGNILLHPMFGGQERTQSEKTLDGKYFVTIQDRDWYWRAYLPEGEDRDHPACNPFGPRGQSLKGVNFPKSLVVVAGLDLVQDWQLAYVDGLKKTGLE--VNLLYLKQATIGFYFLPNNDHFHC--LMEELNKFVHSI 344
BLAST of FC877848 vs. ExPASy Swiss-Prot
Match: GI1L1_ARATH (Probable gibberellin receptor GID1L1 OS=Arabidopsis thaliana GN=GID1L1 PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.888e-20 Identity = 69/247 (27.94%), Postives = 104/247 (42.11%), Query Frame = 2 Query: 50 LPLLFYVRGGGFCGQSAFGPRYHNFCSVFSAQANAIVVSVEYGNFPDRPIPACYEDSWAALNWVASHAGGNGPEPWLNDHADFG-KVLIGGASAGGNIAHTLAFRVGSIGLPCVKLVGVIMVHPFFGG----------------TSPEEDATWLYMCPTNAGLQDPR---LKPPAEDLARLGCERVLIFVAEKDFLKPVAMNYYEDLKKSGWKGTVDLFETHGEGHSFYFDNLKCEKAVELINKFVS 730 +P++ + GG F SA Y C +VVSV Y P+ P P Y+D W ALNWV S + WL D + + G S+GGNIAH +A R G G + ++G I+++P FGG T + D W P + P P + L + + L+ VA D ++ + Y E LKK+G + + E G +N ++ I+ FV+ Sbjct: 106 VPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCVVVSVNYRRAPENPYPCAYDDGWIALNWVNSRS-------WLKSKKDSKVHIFLAGDSSGGNIAHNVALRAGESG---IDVLGNILLNPMFGGNERTESEKSLDGKYFVTVRDRDWYWKAFLPEGEDREHPACNPFSPRGKSLEGVSFPKSLVVVAGLDLIRDWQLAYAEGLKKAGQEVKLMHLEKATVGFYLLPNNNHFHNVMDEISAFVN 342
BLAST of FC877848 vs. ExPASy Swiss-Prot
Match: GI1L3_ARATH (Probable gibberellin receptor GID1L3 OS=Arabidopsis thaliana GN=GID1L3 PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 4.611e-18 Identity = 64/221 (28.96%), Postives = 94/221 (42.53%), Query Frame = 2 Query: 23 EAQNPNQNKL-PLLFYVRGGGFCGQSAFGPRYHNFCSVFSAQANAIVVSVEYGNFPDRPIPACYEDSWAALNWVASHAGGNGPEPWLNDHADFG-KVLIGGASAGGNIAHTLAFRVGSIGLPCVKLVGVIMVHPFFGGTSPEE----------------DATWLYMCPTNAGLQDPRLK---PPAEDLARLGCERVLIFVAEKDFLKPVAMNYYEDLKKSG 622 + QNP ++ P++ + GG F SA Y C A+VVSV Y P+ P Y+D WA L WV S + WL D ++ + G S+GGNI H +A R + ++G I+++P FGGT E D W P + P P ++ L L + L+ VA D ++ + Y E LKK+G Sbjct: 94 DLQNPVDGEIVPVIVFFHGGSFAHSSANSAIYDTLCRRLVGLCGAVVVSVNYRRAPENRYPCAYDDGWAVLKWVNSSS-------WLRSKKDSKVRIFLAGDSSGGNIVHNVAVRAVE---SRIDVLGNILLNPMFGGTERTESEKRLDGKYFVTVRDRDWYWRAFLPEGEDREHPACSPFGPRSKSLEGLSFPKSLVVVAGLDLIQDWQLKYAEGLKKAG 304
BLAST of FC877848 vs. ExPASy Swiss-Prot
Match: GID1_ORYSJ (Gibberellin receptor GID1 OS=Oryza sativa subsp. japonica GN=GID1 PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.752e-17 Identity = 71/262 (27.10%), Postives = 107/262 (40.84%), Query Frame = 2 Query: 5 RIFIPYEAQNPNQNKLPLLFYVRGGGFCGQSAFGPRYHNFCSVFSAQANAIVVSVEYGNFPDRPIPACYEDSWAALNWVASHAGGNGPEPWLNDHADF-GKVLIGGASAGGNIAHTLAFRVGSIGLPCVKLVGVIMVHPFFGGTSPEE----------------DATWLYMCPTNAGLQDPRLKPPAEDLARLG---CERVLIFVAEKDFLKPVAMNYYEDLKKSGWKGTVDLFETHGEGHSFYFDNLKCEKAVELINKFVS 730 R + + P P++ + GG F SA Y + C F + +VVSV Y P+ P Y+D W AL WV S +P++ D +V + G S+GGNIAH +A R G VK+ G I+++ FGGT E D W P +A P P + RLG + LI V+ D + Y + L++ G V E G + + + +E I+ F++ Sbjct: 98 RPILEFLTDAPAAEPFPVIIFFHGGSFVHSSASSTIYDSLCRRFVKLSKGVVVSVNYRRAPEHRYPCAYDDGWTALKWVMS-------QPFMRSGGDAQARVFLSGDSSGGNIAHHVAVRAADEG---VKVCGNILLNAMFGGTERTESERRLDGKYFVTLQDRDWYWKAYLPEDADRDHPACNPFGPNGRRLGGLPFAKSLIIVSGLDLTCDRQLAYADALREDGHHVKVVQCENATVGFYLLPNTVHYHEVMEEISDFLN 349
BLAST of FC877848 vs. ExPASy Swiss-Prot
Match: YFZ3_SCHPO (AB hydrolase superfamily protein C1039.03 OS=Schizosaccharomyces pombe GN=SPAC1039.03 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.131e-11 Identity = 64/238 (26.89%), Postives = 98/238 (41.18%), Query Frame = 2 Query: 2 ARIFIPYEAQNPNQNKLPLLFYVRGGGFCGQSAFGPRYHNFCSVFSAQANAIVVSVEYGNFPDRPIPACYEDSWAALNWVASHAGGNGPEPWLNDHADFGKVLIGGASAGGNIAHTLAFRVGSIGLPCVKLVGVIMVHPFFGGTS-----------------PEEDATWL--YMCPTNAGLQDPRLKP---PAEDLARLGCERVLIFVAEKDFLKPVAMNYYEDLKKSGWKGTVDLFE 649 +RIF P+ + P + GGG+ + ++F + QA +VV+V+Y P+ P PAC +D W AL + +A G P K+ +GG+SAGGNIA L+ +V + LV ++V P T+ P W + P +P P P + C LI A D L A+ Y E L K+G + T+ ++E Sbjct: 86 SRIFRPHGTAP--EGGWPCFLWFHGGGWVLGNI--NTENSFATHMCEQAKCVVVNVDYRLAPEDPFPACIDDGWEALLYCYENADTLGINP--------NKIAVGGSSAGGNIAAVLSHKVAASPANFPPLVLQLLVVPVCDNTANAKTHKSWELFENTPQLPAAKMMWYRRHYLPNEKDWSNPEASPFFYPDSSFKNV-CP-ALICAAGCDVLSSEAIAYNEKLTKAGVESTIKIYE 309 The following BLAST results are available for this feature:
BLAST of FC877848 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC877848 ID=FC877848; Name=FC877848; organism=Citrus clementina; type=EST; length=875bpback to top |