FC878043
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878043 vs. ExPASy Swiss-Prot
Match: FB95_ARATH (F-box protein At2g02240 OS=Arabidopsis thaliana GN=At2g02240 PE=2 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.518e-57 Identity = 75/179 (41.90%), Postives = 107/179 (59.78%), Query Frame = 3 Query: 291 KKSFSLDKRSGKKCYMISARDLLIVWGDTPTYWRWTSVPEARFPEVAELICVCWLEIRCKINTRSLSPRTLYAAYLVYKPTAGSYGFEYQPVDASVGVVGSESQTRTVYLDAERGQRQRYHYPRRIGLFNRSRRQASMPKENDGCYPKERDDEWLEIELGDFLNKEDEDGELGMSVLEV 827 KKSF L+K SGK+C M+S+++L I WG +P YW+W S+PE+RF ++AEL+ VCW EIR K + R LSP T Y+AY+V+K G + PV+ +G+VG ES R +Y R +R R + D P +R+D W+E ELG+F N+E D E+ SV+E+ Sbjct: 140 KKSFWLEKASGKRCIMLSSKELWITWGSSPEYWQWISIPESRFNKIAELLDVCWFEIRGKTSARVLSPGTRYSAYIVFKTKDRCPGLGHLPVEVGLGLVGQESSKRFIYFIGPRDRRGR-------------------RETRDVTKPDQREDGWMEAELGEFFNEERCD-EIEFSVIEI 298 HSP 2 Score: 98.2117 bits (243), Expect = 1.518e-57 Identity = 46/95 (48.42%), Postives = 63/95 (66.32%), Query Frame = 2 Query: 32 LLPEGCIANVISLTTPRDACRLSSVSTVFKSAAESDAVWERFLPPDYPTXXXXXXXXXXXXXXXXXXXKKELYFSLCHNPILIDEGKKKLFIGQA 316 +LPE CI+N+IS T+PRDAC +SVS F+SA SD VW++FLPP+Y + KKELYF+LCHNP+LI++GKK ++ +A Sbjct: 63 VLPEDCISNIISFTSPRDACVAASVSKTFESAVSSDCVWDKFLPPEYES---------LVSRSRVFASKKELYFALCHNPVLIEDGKKSFWLEKA 148
BLAST of FC878043 vs. ExPASy Swiss-Prot
Match: PP2B2_ARATH (Putative F-box protein PP2-B2 OS=Arabidopsis thaliana GN=PP2B2 PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.927e-51 Identity = 76/179 (42.46%), Postives = 102/179 (56.98%), Query Frame = 3 Query: 294 KSFSLDKRSGKKCYMISAR-DLLIVWGDTPTYWRWTSVPEARFPEVAELICVCWLEIRCKINTRSLSPRTLYAAYLVYKPTAGSYGFEYQPVDASVGVVGSESQTRTVYLDAERGQRQRYHYPRRIGLFNRSRRQASMPKENDGCYPKERDDEWLEIELGDFLNKEDEDGELGMSVLEV 827 KSF L+K +GKKC+M+S + + I W TP YWRW S+PEARF EV EL+ VCW E+R +NT+ LSP T Y+AY+V+K G PV+A+VG+VG ES R +Y QR+ +R R D P +R D W+E ELG F N+ D + S+LE+ Sbjct: 122 KSFWLEKENGKKCFMLSPKKSMWITWVSTPQYWRWISIPEARFEEVPELLNVCWFEVRGGMNTKELSPGTRYSAYIVFKTKNGCPNLGDVPVEATVGLVGQESSQRHIYFVGPSDQRR-----------DRETR--------DVTRPTKRKDGWMEAELGQFFNESGCD-VVDTSILEI 280 HSP 2 Score: 88.1965 bits (217), Expect = 1.927e-51 Identity = 41/91 (45.05%), Postives = 58/91 (63.74%), Query Frame = 2 Query: 35 LPEGCIANVISLTTPRDACRLSSVSTVFKSAAESDAVWERFLPPDYPTXXXXXXXXXXXXXXXXXXXKKELYFSLCHNPILIDEGKKKLFI 307 LPE CI+N+IS T+PRDAC +SVS F+SA SD+VW++FLP DY + KKELYF++C NP+L+++G K ++ Sbjct: 45 LPEDCISNIISFTSPRDACVAASVSKTFESAVNSDSVWDKFLPSDYSS---------LVPPSRVFSSKKELYFAICDNPVLVEDGGKSFWL 126
BLAST of FC878043 vs. ExPASy Swiss-Prot
Match: PP2B1_ARATH (F-box protein PP2-B1 OS=Arabidopsis thaliana GN=PP2B1 PE=1 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.025e-49 Identity = 81/200 (40.50%), Postives = 113/200 (56.50%), Query Frame = 3 Query: 291 KKSFSLDKRSGKKCYMISARDLLIVWGDTPTYWRWTSVPEARFPEVAELICVCWLEIRCKINTRSLSPRTLYAAYLVYKPTAG-SYGFEYQPVDASVGVVGSESQTRTVYLDAERGQRQ--RYHYP----RRIGLFNRSRR-----QASMPKENDG--------CYPKERDDEWLEIELGDFLNKEDEDGELGMSVLEVA 830 KKSF ++K SGKKCYM+SA +L I+WGD+P YW+W +VPE++F +VAEL VCW E+R KI+ LS T Y+ Y+V+K G SYGF+ PV+A VG VG + ++VY ++ + HY + R RR Q +E +G PKER D W E+ELG F G+ G +E++ Sbjct: 111 KKSFWVEKASGKKCYMLSAMELTIIWGDSPAYWKWITVPESKFEKVAELRNVCWFEVRGKISCGMLSKGTHYSVYVVFKTANGRSYGFDLVPVEAGVGFVGKVATKKSVYFESGNADSRSATSHYSGISYAMVSRAFRMRRPWMQVQREEEEEVEGERERGMNVVGPKERVDGWSEVELGKFYINNGGCGDDGSDEIEIS 310 HSP 2 Score: 78.5666 bits (192), Expect = 1.025e-49 Identity = 41/103 (39.81%), Postives = 59/103 (57.28%), Query Frame = 2 Query: 8 ISMEAEMGLLPEGCIANVISLTTPRDACRLSSVSTVFKSAAESDAVWERFLPPDYPTXXXXXXXXXXXXXXXXXXXKKELYFSLCHNPILIDEGKKKLFIGQA 316 ++ + LPE CI+ VIS T+PRDAC ++SVS KSAA+SD VWE FLP +Y + KKE++ SL N +L++ GKK ++ +A Sbjct: 26 VTRASRFDALPEDCISKVISHTSPRDACVVASVSKSVKSAAQSDLVWEMFLPSEYSS---------LVLQSANHLSKKEIFLSLADNSVLVENGKKSFWVEKA 119
BLAST of FC878043 vs. ExPASy Swiss-Prot
Match: PP2B8_ARATH (Putative F-box protein PP2-B8 OS=Arabidopsis thaliana GN=PP2B8 PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 2.963e-49 Identity = 75/183 (40.98%), Postives = 103/183 (56.28%), Query Frame = 3 Query: 291 KKSFSLDKRSGKKCYMISARDLLIVWGDTPTYWRWTSVPEARFPEVAELICVCWLEIRCKINTRSLSPRTLYAAYLVYKPTAGSYGFEYQPVDASVGVVG---SESQTRTVYLDAERGQRQRYHYPRRIGLFNRSRRQASMPKENDGCYPKERDDEWLEIELGDFLNKED--EDGELGMSVLE 824 KKS ++K + K+C MISA +L I WG++P WRW P+ARF VAEL+ VC EIR +IN+R +SP+T Y+AY+VYK YGFE V+ VGVVG ES R + D ++ F R R ++ K P+ R D W+EI++G+F N+ D E+ M LE Sbjct: 117 KKSLWIEKANAKRCIMISAMNLAIAWGNSPQSWRWIPDPQARFETVAELLEVCLFEIRGRINSRVISPKTRYSAYIVYKKLNICYGFENVAVEVVVGVVGQDLEESCRRYICFDETMDEQ-----------FRRRDRGKNLVK------PERRKDGWMEIKIGEFFNEGGLLNDDEIEMVALE 282 HSP 2 Score: 90.5077 bits (223), Expect = 2.963e-49 Identity = 45/99 (45.45%), Postives = 63/99 (63.64%), Query Frame = 2 Query: 20 AEMGLLPEGCIANVISLTTPRDACRLSSVSTVFKSAAESDAVWERFLPPDYPTXXXXXXXXXXXXXXXXXXXKKELYFSLCHNPILIDEGKKKLFIGQA 316 AE+ LPE C++ ++S T+P+DAC L+SVS F SA +SD VWE+F+PP+Y + KKELYF+LC +LID+GKK L+I +A Sbjct: 34 AELDDLPEECVSIIVSFTSPQDACVLASVSKTFASAVKSDIVWEKFIPPEYES-------LISQSRAFKFLSKKELYFALCDKSVLIDDGKKSLWIEKA 125
BLAST of FC878043 vs. ExPASy Swiss-Prot
Match: P2B11_ARATH (F-box protein PP2-B11 OS=Arabidopsis thaliana GN=PP2B11 PE=1 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 5.943e-47 Identity = 77/176 (43.75%), Postives = 95/176 (53.98%), Query Frame = 3 Query: 297 SFSLDKRSGKKCYMISARDLLIVWGDTPTYWRWTSVPEARFPEVAELICVCWLEIRCKINTRSLSPRTLYAAYLVYKPTAGSYGFEYQPVDASVGVVGSESQTRTVYLDAERGQRQRYHYPRRIGLFNRSRRQASMPKENDGCYPKERDDEWLEIELGDFLNKEDEDGELGMSVLE 824 SFSL+++SG KCYM++AR L IVWG YW W S+P RF EVAELI V WLEI KIN LS TLYAAY V+K YGF QPV+ S+ + +ES V P I L S + +G P R D W E+ELG F + + GE+ MS+ E Sbjct: 82 SFSLERKSGNKCYMMAARALNIVWGHEQRYWHWISLPNTRFGEVAELIMVWWLEITGKINITLLSDDTLYAAYFVFKWNHSPYGFR-QPVETSLVLADTESTDNVV-------------QPSMISLMQDSGGE-------EGQSPVLRRDGWYEVELGQFFKRRGDLGEIEMSLKE 236 HSP 2 Score: 80.8777 bits (198), Expect = 5.943e-47 Identity = 41/86 (47.67%), Postives = 53/86 (61.63%), Query Frame = 2 Query: 26 MGLLPEGCIANVISLTTPRDACRLSSVSTVFKSAAESDAVWERFLPPDYPTXXXXXXXXXXXXXXXXXXXKKELYFSLCHNPILID 283 M LPE CIA ++SLTTP D CRLS+VS++F+SAA SD VW FLP D+P +K+L+FSL NP+LI+ Sbjct: 1 MNNLPEDCIAKILSLTTPLDVCRLSAVSSIFRSAAGSDDVWNHFLPADFPA---------GFAAPAGLPTRKQLFFSLVDNPLLIN 77
BLAST of FC878043 vs. ExPASy Swiss-Prot
Match: P2B12_ARATH (Putative F-box protein PP2-B12 OS=Arabidopsis thaliana GN=PP2B12 PE=4 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 1.188e-44 Identity = 79/179 (44.13%), Postives = 103/179 (57.54%), Query Frame = 3 Query: 291 KKSFSLDKRSGKKCYMISARDLLIVWGDTPTYWRWTSVPEARFPEVAELICVCWLEIRCKINTRSLSPRTLYAAYLVYK-PTAGSYGFEYQPVDASVGVVGSESQTRTVYLDAERGQRQRYHYPRRIGLFNRSRRQASMPKENDGCYPKERDDEWLEIELGDFLNKEDEDGELGMSVLE 824 + SF ++KRSGKKC+M+SAR L IVW D+P +W W S+P++RF EVA L+ VCW EIR KI+T LS T Y+AYLV+K GS+GFE P++ S R R + RR+ F +S Q S R+D WLEIELG++ D D E+ MSVLE Sbjct: 82 RTSFWMEKRSGKKCWMLSARKLDIVWVDSPEFWIWVSIPDSRFEEVAGLLMVCWFEIRGKISTSLLSKATNYSAYLVFKEQEMGSFGFESLPLEVSF-----------------RSTRTEVYNNRRV--FLKSGTQES------------REDGWLEIELGEYYVGFD-DEEIEMSVLE 228 HSP 2 Score: 74.3294 bits (181), Expect = 1.188e-44 Identity = 36/91 (39.56%), Postives = 53/91 (58.24%), Query Frame = 2 Query: 35 LPEGCIANVISLTTPRDACRLSSVSTVFKSAAESDAVWERFLPPDYPTXXXXXXXXXXXXXXXXXXXKKELYFSLCHNPILIDEGKKKLFI 307 LPE CIA +IS T+P DACR+S+VS + +SAA+S+ WERFLP DY K+L+ C +P+LI++G+ ++ Sbjct: 6 LPEECIATMISFTSPFDACRISAVSKLLRSAADSNTTWERFLPSDY---------RMYIDNSLSRFSNKQLFLRFCESPLLIEDGRTSFWM 87
BLAST of FC878043 vs. ExPASy Swiss-Prot
Match: P2B13_ARATH (F-box protein PP2-B13 OS=Arabidopsis thaliana GN=PP2B13 PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 4.456e-44 Identity = 79/187 (42.25%), Postives = 107/187 (57.22%), Query Frame = 3 Query: 288 AKKSFSLDKRSGKKCYMISARDLLIVWGDTPTYWRWTSVPEARFPEVAELICVCWLEIRCKINTRSLSPRTLYAAYLVYKPTAGSYGFEYQPVDASVGVVGSESQTRTVY---LDAERGQRQRYHYPRRIGLFNRSRRQASMPKENDG----CYPKERDDEWLEIELGDFLNKEDEDGELGMSVLEV 827 A+K F ++K SGK Y++SARD+ I + D +Y W++V ++RF E AELI LEI+ KI T LSP T Y AYL+ K T G+YG + P + SV ++ T Y LD ++ Q +R Y NR R A + G PK RDD WLEIELG+F+ +E ED E+ MS+ EV Sbjct: 82 ARKLFKINKFSGKISYILSARDISITYSDHASYCSWSNVSDSRFSESAELITTDRLEIKGKIQTTVLSPNTKYGAYLIMKVTNGAYGLDLVPAETSVKSKNGQNNKNTTYLCCLDEKKQQMKRLFYG------NREERMAMTVEAVGGDGKRREPKARDDGWLEIELGEFVTREGEDDEVNMSLTEV 262 HSP 2 Score: 66.2402 bits (160), Expect = 4.456e-44 Identity = 36/90 (40.00%), Postives = 51/90 (56.67%), Query Frame = 2 Query: 26 MGLLPEGCIANVISLTTPRDACRLSSVSTVFKSAAESDAVWERFLPPDYPTXXXXXXXXXXXXXXXXXXXKKELYFSLCHNPILIDEGKK 295 M +LPE C+AN+++ T+P DA S VS+VF+ A +SD VWE+FLP Y + KKE+Y LC + +LID +K Sbjct: 1 MMMLPEACVANILAFTSPADAFSSSEVSSVFRLAGDSDFVWEKFLPSHYKS-----LISQSTDHHRIFSSKKEIYRCLC-DSLLIDNARK 84
BLAST of FC878043 vs. ExPASy Swiss-Prot
Match: P2B15_ARATH (F-box protein PP2-B15 OS=Arabidopsis thaliana GN=PP2B15 PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 1.814e-42 Identity = 72/185 (38.92%), Postives = 104/185 (56.22%), Query Frame = 3 Query: 291 KKSFSLDKRSGKKCYMISARDLLIVWGDTPTYWRWTSVPEARFPEVAELICVCWLEIRCKINTRSLSPRTLYAAYLVYKPTAGSYGFEYQPVDASVGVVGSESQTRTVY---LDAERGQRQRYHYPRRIGLFNRSRRQASMPKENDGCYPKERDDEWLEIELGDF---LNKEDEDGELGMSVLEV 827 +K F ++K SGK Y++S+RDL I W D YW W+ ++RF E +LI WLEI KI T +LSP T Y AYL+ K T+ +YG + P + S+ V E + ++ Y LD ++ Q +R Y +R S +E P+ RDD W+EIELG+F + D+D E+ MS+ EV Sbjct: 81 RKIFKIEKLSGKISYILSSRDLSITWSDQRHYWSWSPRSDSRFSEGVQLIMTDWLEIIGKIQTGALSPNTNYGAYLIMKVTSRAYGLDLVPAETSIKVGNGEKKIKSTYLSCLDNKKQQMERVFYGQREQRMATHEVVRSHRRE-----PEVRDDGWMEIELGEFETGSGEGDDDKEVVMSLTEV 260 HSP 2 Score: 70.0922 bits (170), Expect = 1.814e-42 Identity = 38/88 (43.18%), Postives = 50/88 (56.82%), Query Frame = 2 Query: 32 LLPEGCIANVISLTTPRDACRLSSVSTVFKSAAESDAVWERFLPPDYPTXXXXXXXXXXXXXXXXXXXKKELYFSLCHNPILIDEGKK 295 +LPE C+A ++S TTP D ++VS+VF+ A +SD VWE+FLP DY KKELY LC + ILID G+K Sbjct: 1 MLPEACVATILSFTTPADTISSAAVSSVFRVAGDSDFVWEKFLPTDY-----CHVISRSTDPHRIFSSKKELYRCLCES-ILIDNGRK 82
BLAST of FC878043 vs. ExPASy Swiss-Prot
Match: SKIP3_ARATH (F-box protein SKIP3 OS=Arabidopsis thaliana GN=SKIP3 PE=1 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 5.501e-38 Identity = 45/94 (47.87%), Postives = 63/94 (67.02%), Query Frame = 2 Query: 35 LPEGCIANVISLTTPRDACRLSSVSTVFKSAAESDAVWERFLPPDYPTXXXXXXXXXXXXXXXXXXXKKELYFSLCHNPILIDEGKKKLFIGQA 316 LPEGCI+N+IS T+P DAC ++VS +F+SA +SD VWE+FLP DY + KKELYFSLC++P+LI++GK L++ +A Sbjct: 27 LPEGCISNIISFTSPEDACVAAAVSKIFESAVKSDIVWEKFLPTDYES---------LITPSRVFSSKKELYFSLCNDPLLIEDGKMSLWLEKA 111 HSP 2 Score: 85.8853 bits (211), Expect = 5.501e-38 Identity = 60/182 (32.97%), Postives = 90/182 (49.45%), Query Frame = 3 Query: 291 KKSFSLDKRSGKKCYMISARDL-LIVWGDTPTYWRWTSVPEARFPEVAELICVCWLEIRCKINTRSLSPRTLYAAYLVYKPTAGSYGFEYQPVDASVGVVGSESQTRTVYLDAE-RGQRQRYHYPRRIGLFNRSRRQASMPKENDGCYPKERDDEWLEIELGDFLNKEDEDGELGMSVLEVA 830 K S L+K SGK+C M+SA + L D + W PE+RF VA L E C++NTR LS RT Y+ Y+V+K GF+ ++A VG+VG ES + D +GQ +R++ + K P+ R+D W+E E+G+F N E G + +E++ Sbjct: 103 KMSLWLEKASGKRCIMLSATAMNLSSMADMSQRFLWIPCPESRFETVAALREAYRFEFNCRMNTRVLSLRTRYSVYIVFKKADNWCGFKGVSIEAVVGIVGEESFRSFICFDTHGKGQ---------------ARKRKVVAK------PELREDGWMETEIGEFYN---EGGLMSSDEVEIS 260
BLAST of FC878043 vs. ExPASy Swiss-Prot
Match: PP2B6_ARATH (Putative F-box protein PP2-B6 OS=Arabidopsis thaliana GN=PP2B6 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 8.358e-36 Identity = 55/180 (30.56%), Postives = 88/180 (48.89%), Query Frame = 3 Query: 291 KKSFSLDKRSGKKCYMISARDLLIVWGDTPTYWRWTSVPEARFPEVAELICVCWLEIRCKINTRSLSPRTLYAAYLVYKPTAGSYGFEYQPVDASVGVVGSESQTRTVYLDAERGQRQRYHYPRRIGLFNRSRRQASMPKENDGCYPKERDDEWLEIELGDFLNKEDEDGELGMSVLEVA 830 KKSF L+ SGKKC +++A++L I G+ P YW+W + E+ F +V EL+ ++ ++T+ LS T Y+ Y+VYK +G P+ VG G E P++ F+ S + + K+R D W+E E+GDF N + G +G +EV+ Sbjct: 124 KKSFWLETASGKKCVLLAAKELWITGGNNPEYWQWIELCESSFEKVPELLNNRSFQMGGSMSTQILSLGTHYSVYIVYKIKDERHGLRDLPIQVGVGFKGQE-------------------MPKQFICFDESTDKTKEWPKKKLMKSKKRGDGWMEAEIGDFFN---DGGLMGFDEVEVS 281 HSP 2 Score: 82.8037 bits (203), Expect = 8.358e-36 Identity = 38/94 (40.43%), Postives = 58/94 (61.70%), Query Frame = 2 Query: 35 LPEGCIANVISLTTPRDACRLSSVSTVFKSAAESDAVWERFLPPDYPTXXXXXXXXXXXXXXXXXXXKKELYFSLCHNPILIDEGKKKLFIGQA 316 LPE CI+N+IS T+PRD C +SVS F A + D++WE+FLP +Y + KK+LYF+LC++P+L+++GKK ++ A Sbjct: 48 LPEDCISNIISFTSPRDVCVSASVSKSFAHAVQCDSIWEKFLPSEYES---------LIPPWRVFSSKKDLYFTLCYDPVLVEDGKKSFWLETA 132 The following BLAST results are available for this feature:
BLAST of FC878043 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878043 ID=FC878043; Name=FC878043; organism=Citrus clementina; type=EST; length=833bpback to top |