FC878080
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP4_ARATH (ATP-dependent Clp protease proteolytic subunit 4, chloroplastic OS=Arabidopsis thaliana GN=CLPP4 PE=1 SV=1) HSP 1 Score: 332.413 bits (851), Expect = 1.896e-90 Identity = 165/201 (82.09%), Postives = 188/201 (93.53%), Query Frame = 2 Query: 224 QTPATAMRGAEADAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSIIPLVPVPEKVKP 826 QT +A+RGAE+D MGLLL+ERIVFLG++IDDFVADAI+SQLLLLDA+DP KDI+LF+NSPGGSLSATMAIYDVVQLVRADVST+ALG++ASTAS+ILG GTKGKRFAMPNTRIMIHQP+GGASGQ +DVEIQA+E+MHNK+N T II+G T RSFEQV KDIDRDRYMSPIEAVEYG+IDGVID DSIIPL PVP++VKP Sbjct: 67 QTQESAIRGAESDVMGLLLRERIVFLGSSIDDFVADAIMSQLLLLDAKDPKKDIKLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGAGTKGKRFAMPNTRIMIHQPLGGASGQAIDVEIQAKEVMHNKNNVTSIIAGCTSRSFEQVLKDIDRDRYMSPIEAVEYGLIDGVIDGDSIIPLEPVPDRVKP 267
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP3_PROMA (ATP-dependent Clp protease proteolytic subunit 3 OS=Prochlorococcus marinus GN=clpP3 PE=3 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 7.044e-53 Identity = 100/212 (47.17%), Postives = 153/212 (72.17%), Query Frame = 2 Query: 155 ISTKTLALQQQQRQHDVPLSSAPQTPAT---AMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVID 778 I+TK + Q + + D+P S P + RG A D LL+ERI+FLG +++D +ADA+++Q+L L+A+DP KDI+L++NSPGGS++A +AIYD +Q V D+ T+ G++AS + +L GG+KGKR A+PN+RIMIHQP+GGA GQ +++EIQA+EI+ K+ +++ TG+S E++ +D DRD ++SP EAVEYG+ID V++ Sbjct: 2 INTKCIHPVQNKWKGDLPCSGPGVLPTVIEQSGRGERAFDIYSRLLRERIIFLGTDVNDQIADALVAQMLFLEAEDPEKDIQLYINSPGGSVTAGLAIYDTMQQVNPDIVTMCYGLAASMGAFLLAGGSKGKRLALPNSRIMIHQPLGGAQGQAVEIEIQAKEILFLKETLNNLLAEHTGQSLEKISEDTDRDHFLSPQEAVEYGLIDKVVN 213
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP_MOOTA (ATP-dependent Clp protease proteolytic subunit OS=Moorella thermoacetica (strain ATCC 39073) GN=clpP PE=3 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 2.049e-52 Identity = 99/188 (52.66%), Postives = 135/188 (71.81%), Query Frame = 2 Query: 221 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 781 P RG A D LLK+RI+FLG+ IDD VA+ +I+Q+L L+A+DP KDI L++NSPGGS+SA MAI+D +Q +R DVST+ +G++AS + +L G KGKRFA+PN+ IMIHQPMGG GQ +D+EI A+ I+ +DN RI+S TG+ EQ+ +D DRD +M+ EA EYG+ID VI + Sbjct: 6 PMVVEQTSRGERAYDIYSRLLKDRIIFLGSAIDDHVANLVIAQMLFLEAEDPDKDIHLYINSPGGSISAGMAIFDTMQYIRPDVSTICVGLAASMGAFLLAAGAKGKRFALPNSEIMIHQPMGGTQGQAVDIEIHAKRILAIRDNLNRILSEITGKPLEQIARDTDRDHFMTAREAREYGLIDEVITK 193
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP2_SYNS9 (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. (strain CC9902) GN=clpP2 PE=3 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 2.049e-52 Identity = 99/196 (50.51%), Postives = 142/196 (72.45%), Query Frame = 2 Query: 203 VPLSSAPQTPATAM---RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVID 778 +P+S+ P RG A D LL+ERI+FLG +DD VADA+++Q+L L+A+DP KDI+++VNSPGGS++A +AIYD +Q V DV T+ G++AS + +L GGTKGKR A+PN RIMIHQP+GGA GQ +D+EIQA+EI+ K+ +++ TG+ +++ +D DRD ++SP EAVEYG+ID V+D Sbjct: 1 MPISAPGPLPTVVEQSGRGDRAFDIYSRLLRERIIFLGTGVDDAVADALVAQMLFLEAEDPEKDIQIYVNSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALPNARIMIHQPLGGAQGQAVDIEIQAKEILFLKETLNGLLAEHTGQPLDKISEDTDRDYFLSPAEAVEYGLIDRVVD 196
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP1_SYNSC (ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus sp. (strain CC9605) GN=clpP1 PE=3 SV=2) HSP 1 Score: 206.068 bits (523), Expect = 2.049e-52 Identity = 95/179 (53.07%), Postives = 137/179 (76.54%), Query Frame = 2 Query: 245 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVID 778 RG A D LL+ERI+FLG +DD VADA+++Q+L L+A+DP KDI++++NSPGGS++A +AIYD +Q V DV T+ G++AS + +L GGTKGKR A+PN RIMIHQP+GGA GQ +D+EIQA+EI++ K+ +++ TG+ +++ +D DRD ++SP EAVEYG+ID V+D Sbjct: 18 RGDRAFDIYSRLLRERIIFLGTGVDDAVADALVAQMLFLEAEDPEKDIQIYINSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALPNARIMIHQPLGGAQGQAVDIEIQAKEILYLKETLNGLMAEHTGQPLDKISEDTDRDYFLSPAEAVEYGLIDRVVD 196
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP1_SYNPX (ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus sp. (strain WH8102) GN=clpP1 PE=3 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 1.328e-51 Identity = 97/203 (47.78%), Postives = 145/203 (71.43%), Query Frame = 2 Query: 182 QQQRQHDVPLSSAPQTPATAM---RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVID 778 Q + + ++P+S+ P RG A D LL+ERI+FLG +DD VADA+++Q+L L+A+DP KDI++++NSPGGS++A +AIYD +Q V DV T+ G++AS + +L GG KGKR A+PN RIMIHQP+GGA GQ +D+EIQA+EI+ K+ +++ TG+ +++ +D DRD ++SP EAV+YG+ID V+D Sbjct: 11 QNRWRAEMPISAPGPLPTVVEQSGRGDRAFDIYSRLLRERIIFLGTGVDDAVADALVAQMLFLEAEDPEKDIQIYINSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGCKGKRLALPNARIMIHQPLGGAQGQAVDIEIQAKEILFLKETLNGLMADHTGQPLDKIAEDTDRDYFLSPAEAVQYGLIDRVVD 213
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP3_SYNP6 (ATP-dependent Clp protease proteolytic subunit 3 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=clpP3 PE=3 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 1.735e-51 Identity = 97/183 (53.01%), Postives = 137/183 (74.86%), Query Frame = 2 Query: 245 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSI 790 RG A D LL+ERIVFLG +DD VAD+I++QLL L+A+DP KDI+L++NSPGGS++A MAIYD +Q V DV+T+ G++AS + +L GG +GKR A+P+ RIMIHQP+GGA GQ +D+EIQAREI+++K +++ TG+ E+++ D DRD +MSP EA YG+ID V+ R ++ Sbjct: 47 RGERAFDIYSRLLRERIVFLGTGVDDAVADSIVAQLLFLEAEDPEKDIQLYINSPGGSVTAGMAIYDTMQQVAPDVATICFGLAASMGAFLLSGGAQGKRMALPSARIMIHQPLGGAQGQAVDIEIQAREILYHKSTLNDLLAQHTGQPLEKIEVDTDRDFFMSPEEAKAYGLIDQVLTRPTM 229
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP2_SYNE7 (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus elongatus (strain PCC 7942) GN=clpP2 PE=3 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 1.735e-51 Identity = 97/183 (53.01%), Postives = 137/183 (74.86%), Query Frame = 2 Query: 245 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSI 790 RG A D LL+ERIVFLG +DD VAD+I++QLL L+A+DP KDI+L++NSPGGS++A MAIYD +Q V DV+T+ G++AS + +L GG +GKR A+P+ RIMIHQP+GGA GQ +D+EIQAREI+++K +++ TG+ E+++ D DRD +MSP EA YG+ID V+ R ++ Sbjct: 47 RGERAFDIYSRLLRERIVFLGTGVDDAVADSIVAQLLFLEAEDPEKDIQLYINSPGGSVTAGMAIYDTMQQVAPDVATICFGLAASMGAFLLSGGAQGKRMALPSARIMIHQPLGGAQGQAVDIEIQAREILYHKSTLNDLLAQHTGQPLEKIEVDTDRDFFMSPEEAKAYGLIDQVLTRPTM 229
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP1_PROMM (ATP-dependent Clp protease proteolytic subunit 1 OS=Prochlorococcus marinus (strain MIT 9313) GN=clpP1 PE=3 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 2.266e-51 Identity = 98/195 (50.26%), Postives = 141/195 (72.31%), Query Frame = 2 Query: 206 PLSSA---PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVID 778 P+SS P + RG A D LL+ERI+FLG +DD VADA+++Q+L L+A+DP KDI++++NSPGGS++A +AIYD +Q V DV T+ G++AS + +L GGTKGKR A+PN RIMIHQP+GGA GQ +D+EIQA+EI+ K+ +++ TG+ ++ +D DRD ++SP +AVEYG+ID V+D Sbjct: 19 PVSSPGILPTVVEQSGRGERAFDIYSRLLRERIIFLGTGVDDQVADALVAQMLFLEAEDPEKDIQIYINSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLCGGTKGKRLALPNARIMIHQPLGGAQGQAVDIEIQAKEILFLKETLNGLLAEHTGQPLNKIAEDTDRDHFLSPAKAVEYGLIDRVVD 213
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP3_PROMT (ATP-dependent Clp protease proteolytic subunit 3 OS=Prochlorococcus marinus (strain NATL2A) GN=clpP3 PE=3 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 2.959e-51 Identity = 91/172 (52.91%), Postives = 135/172 (78.49%), Query Frame = 2 Query: 260 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 775 D LL+ERI+FLG +++D VADA+++Q+L L+A DP KDI+L+VNSPGGS++A +AIYD +Q V DV T+ G++AS + +L GGTKGKR A+PN+RIMIHQP+GGA GQ +++EIQA+EI++ K+ +++ TG++ +++ +D DRD ++SP EAVEYG+ID V+ Sbjct: 17 DIYSRLLRERIIFLGTDVNDQVADALVAQMLFLEADDPEKDIQLYVNSPGGSVTAGLAIYDTMQQVSPDVITICYGLAASMGAFLLSGGTKGKRLALPNSRIMIHQPLGGAQGQAVEIEIQAKEILYLKETLNSLLAEHTGQNIQKISEDTDRDHFLSPQEAVEYGLIDKVV 188 The following BLAST results are available for this feature:
BLAST of FC878080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878080 ID=FC878080; Name=FC878080; organism=Citrus clementina; type=EST; length=837bpback to top |