FC878086
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878086 vs. ExPASy Swiss-Prot
Match: GLGL1_ARATH (Glucose-1-phosphate adenylyltransferase large subunit 1, chloroplastic OS=Arabidopsis thaliana GN=ADG2 PE=1 SV=3) HSP 1 Score: 369.007 bits (946), Expect = 1.783e-101 Identity = 193/265 (72.83%), Postives = 221/265 (83.40%), Query Frame = 3 Query: 42 MALSADGRFSLSATGQXXXXXXXXXXSRNWRLVKSCNGELMGTKLN----PNAKHRNEAGSKLVQKQVCMTLTADIAGESKLRDLEMEKRDARTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFGDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMDYMDFVQNHRQSGADITISCLPMDDRRASDFGLMKI 824 M +SAD R SLSA +R+ +L CNGELMG KLN PN + R+ + QK++ M+L + +AGESK+++LE EKRD RTVA++ILGGGAGTRL+PLTK+RAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYN +G+ FGDG VEVLAATQTPGE+GKRWFQGTADAVRQFHWLFED R+K IEDVLILSGDHLYRMDYMDF+Q+HRQSGADI+ISC+P+DDRRASDFGLMKI Sbjct: 1 MVVSADCRISLSAPS--CIRSSSTGLTRHIKLGSFCNGELMGKKLNLSQLPNIRLRSS--TNFSQKRILMSLNS-VAGESKVQELETEKRDPRTVASIILGGGAGTRLFPLTKRRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYN-SNGLGFGDGYVEVLAATQTPGESGKRWFQGTADAVRQFHWLFEDARSKDIEDVLILSGDHLYRMDYMDFIQDHRQSGADISISCIPIDDRRASDFGLMKI 259
BLAST of FC878086 vs. ExPASy Swiss-Prot
Match: GLGL3_SOLTU (Glucose-1-phosphate adenylyltransferase large subunit 3, chloroplastic/amyloplastic OS=Solanum tuberosum GN=AGPS3 PE=2 SV=1) HSP 1 Score: 345.51 bits (885), Expect = 2.111e-94 Identity = 169/206 (82.04%), Postives = 189/206 (91.75%), Query Frame = 3 Query: 210 SKLVQKQVCMTLTADIAGESKLRDLEMEKR-DARTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFGDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMDYMDFVQNHRQSGADITISCLPMDDRRASDFGLMKI 824 S +V+ +CM+LT DIAGE+KL+DLE +K+ DARTV A+ILGGGAGTRL+PLTK+RAKPAVP+GGAYRLIDVPMSNCINSGINKVYILTQ+NSASLNRH+ARAYN+G+GVTF G VEVLAATQTPGE GKRWFQGTA AVRQFHWLFED R+K IEDVLILSGDHLYRMDY+ FVQ+HRQSGADITIS LP+DD RASDFGLMKI Sbjct: 14 SNVVKPNICMSLTTDIAGEAKLKDLERQKKGDARTVVAIILGGGAGTRLFPLTKRRAKPAVPMGGAYRLIDVPMSNCINSGINKVYILTQFNSASLNRHIARAYNFGNGVTFESGYVEVLAATQTPGELGKRWFQGTAHAVRQFHWLFEDARSKDIEDVLILSGDHLYRMDYLHFVQSHRQSGADITISSLPIDDSRASDFGLMKI 219
BLAST of FC878086 vs. ExPASy Swiss-Prot
Match: GLGL2_ARATH (Glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic OS=Arabidopsis thaliana GN=APL2 PE=2 SV=2) HSP 1 Score: 291.967 bits (746), Expect = 2.770e-78 Identity = 142/212 (66.98%), Postives = 169/212 (79.72%), Query Frame = 3 Query: 189 KHRNEAGSKLVQKQVCMTLTADIAGESKLRDLEMEKRDARTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFGDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMDYMDFVQNHRQSGADITISCLPMDDRRASDFGLMKI 824 K R+ K+ + LT + ES L + D + VA++ILGGGAGTRL+PLT +RAKPAVPIGG YRLID+PMSNCINSGI K++ILTQ+NS SLNRHL+R YN+G+GV FGDG VEVLAATQT G+AGK+WFQGTADAVRQF W+FED + K +E VLILSGDHLYRMDYM+FVQ H +S ADIT+SCLPMD+ RASDFGL+KI Sbjct: 44 KLRSAPQKKIQTNLIRSVLTPFVDQESHEPLLRTQNADPKNVASIILGGGAGTRLFPLTSKRAKPAVPIGGCYRLIDIPMSNCINSGIRKIFILTQFNSFSLNRHLSRTYNFGNGVNFGDGFVEVLAATQTSGDAGKKWFQGTADAVRQFIWVFEDAKTKNVEHVLILSGDHLYRMDYMNFVQKHIESNADITVSCLPMDESRASDFGLLKI 255
BLAST of FC878086 vs. ExPASy Swiss-Prot
Match: GLGL1_BETVU (Glucose-1-phosphate adenylyltransferase large subunit, chloroplastic/amyloplastic OS=Beta vulgaris GN=AGPS1 PE=2 SV=1) HSP 1 Score: 288.115 bits (736), Expect = 4.000e-77 Identity = 134/180 (74.44%), Postives = 154/180 (85.56%), Query Frame = 3 Query: 285 EMEKRDARTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFGDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMDYMDFVQNHRQSGADITISCLPMDDRRASDFGLMKI 824 E K D + VAA++LGGGAGTRL+PLT +RAKPAVPIGG YRLIDVPMSNCINSGI K++ILTQ+NS SLNRHLAR YN+G GV FGDG VEV AATQTPGE+GK+WFQGTADAVRQF W FED ++K +E ++ILSGDHLYRMDYM F Q H + ADIT+SC+PMDD RASD+GLMKI Sbjct: 80 ESPKADPKNVAAIVLGGGAGTRLFPLTSRRAKPAVPIGGCYRLIDVPMSNCINSGIRKIFILTQFNSFSLNRHLARTYNFGDGVNFGDGFVEVFAATQTPGESGKKWFQGTADAVRQFFWAFEDSKSKDVEHIVILSGDHLYRMDYMSFWQKHIDTNADITVSCIPMDDSRASDYGLMKI 259
BLAST of FC878086 vs. ExPASy Swiss-Prot
Match: GLGL1_SOLTU (Glucose-1-phosphate adenylyltransferase large subunit 1 (Fragment) OS=Solanum tuberosum GN=AGPS1 PE=2 SV=1) HSP 1 Score: 274.248 bits (700), Expect = 5.978e-73 Identity = 128/181 (70.72%), Postives = 155/181 (85.64%), Query Frame = 3 Query: 282 LEMEKRDARTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFGDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMDYMDFVQNHRQSGADITISCLPMDDRRASDFGLMKI 824 LE + + + VAAVILGGG GT+L+PLT + A PAVP+GG YRLID+PMSNCINS INK+++LTQYNSA LNRH+AR Y +G+GV+FGDG VEVLAATQTPGEAGK+WFQGTADAVR+F W+FED +NK IE++++LSGDHLYRMDYM+ VQNH ADIT+SC P +D RASDFGL+KI Sbjct: 28 LERRRANPKDVAAVILGGGEGTKLFPLTSRTATPAVPVGGCYRLIDIPMSNCINSAINKIFVLTQYNSAPLNRHIARTY-FGNGVSFGDGFVEVLAATQTPGEAGKKWFQGTADAVRKFIWVFEDAKNKNIENIVVLSGDHLYRMDYMELVQNHIDRNADITLSCAPAEDSRASDFGLVKI 207
BLAST of FC878086 vs. ExPASy Swiss-Prot
Match: GLGL3_ARATH (Glucose-1-phosphate adenylyltransferase large subunit 3, chloroplastic OS=Arabidopsis thaliana GN=APL3 PE=2 SV=2) HSP 1 Score: 270.396 bits (690), Expect = 8.632e-72 Identity = 133/229 (58.08%), Postives = 174/229 (75.98%), Query Frame = 3 Query: 156 ELMGTKLNP------NAKHRNEAGSKLVQKQVCMTLTADIAGESKLRDLEMEKRDARTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFGDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMDYMDFVQNHRQSGADITISCLPMDDRRASDFGLMKI 824 ++ G+ L P + K RN V + + A A +++ E + D + VAA+ILGGG G +L+PLTK+ A PAVP+GG YR+ID+PMSNCINS INK+++LTQ+NSASLNRHLAR Y +G+G+ FGDG VEVLAATQTPGEAGK+WFQGTADAVR+F W+FED +N+ IE+++ILSGDHLYRM+YMDFVQ+H S ADIT+SC P+D+ RAS++GL+ I Sbjct: 31 KIKGSVLKPFSSDLSSKKFRNRKLRPGVAYAIATSKNAKEALKNQPSMFERRRADPKNVAAIILGGGDGAKLFPLTKRAATPAVPVGGCYRMIDIPMSNCINSCINKIFVLTQFNSASLNRHLARTY-FGNGINFGDGFVEVLAATQTPGEAGKKWFQGTADAVRKFLWVFEDAKNRNIENIIILSGDHLYRMNYMDFVQHHVDSKADITLSCAPVDESRASEYGLVNI 258
BLAST of FC878086 vs. ExPASy Swiss-Prot
Match: GLGL4_ARATH (Probable glucose-1-phosphate adenylyltransferase large subunit, chloroplastic OS=Arabidopsis thaliana GN=At2g21590 PE=2 SV=1) HSP 1 Score: 267.314 bits (682), Expect = 7.307e-71 Identity = 126/180 (70.00%), Postives = 154/180 (85.56%), Query Frame = 3 Query: 285 EMEKRDARTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFGDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMDYMDFVQNHRQSGADITISCLPMDDRRASDFGLMKI 824 E K D + VAA+ILGGG G +L+PLT + A PAVP+GG YRLID+PMSNCINS INK+++LTQ+NSASLNRHLAR Y +G+G+ FG G VEVLAATQTPGEAGK+WFQGTADAVR+F W+FED +N+ IE++LILSGDHLYRM+YMDFVQ+H S ADIT+SC P+ + RAS+FGL+KI Sbjct: 82 ERRKVDPQNVAAIILGGGNGAKLFPLTMRAATPAVPVGGCYRLIDIPMSNCINSCINKIFVLTQFNSASLNRHLARTY-FGNGINFGGGFVEVLAATQTPGEAGKKWFQGTADAVRKFLWVFEDAKNRNIENILILSGDHLYRMNYMDFVQSHVDSNADITLSCAPVSESRASNFGLVKI 260
BLAST of FC878086 vs. ExPASy Swiss-Prot
Match: GLGL2_SOLTU (Glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic/amyloplastic OS=Solanum tuberosum GN=AGPS2 PE=2 SV=1) HSP 1 Score: 265.388 bits (677), Expect = 2.777e-70 Identity = 129/180 (71.67%), Postives = 150/180 (83.33%), Query Frame = 3 Query: 285 EMEKRDARTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFGDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMDYMDFVQNHRQSGADITISCLPMDDRRASDFGLMKI 824 E D + VA+VILGGG GTRL+PLT +RAKPAVPIGG YRLIDVPMSNCINSGI K++ILTQ+NS SLNRHLA YN+G+GV FGDG VEVLA TQTPG+ K WFQ ADAVR+F W+FE+ +NK +E ++ILSGDHLYRM+YMDFVQ H + ADIT+SC+PMDD RASDFGLMKI Sbjct: 79 EQPTADPKAVASVILGGGVGTRLFPLTSRRAKPAVPIGGCYRLIDVPMSNCINSGIRKIFILTQFNSFSLNRHLA-TYNFGNGVGFGDGFVEVLAGTQTPGDGRKMWFQ-AADAVREFIWVFENQKNKNVEHIIILSGDHLYRMNYMDFVQKHIDTNADITVSCVPMDDGRASDFGLMKI 256
BLAST of FC878086 vs. ExPASy Swiss-Prot
Match: GLGL2_MAIZE (Glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic/amyloplastic OS=Zea mays GN=AGP2 PE=2 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 4.747e-62 Identity = 122/197 (61.93%), Postives = 148/197 (75.13%), Query Frame = 3 Query: 243 LTADIAGESKLRDLEMEKR---DARTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFGDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFED-PRNKVIEDVLILSGDHLYRMDYMDFVQNHRQSGADITISCLPMDDRRASDFGLMK 821 LT+D ++ +R +R D VAAVILGGG GT+L+PLT RA PAVPIGG YRLID+PMSNC NSGINK++++TQ+NSASLNRH+ R Y G G+ F DG VEVLAATQ PGEA WFQGTADAVR+F W+ ED ++K IE +LILSGD LYRMDYM+ VQ H ADIT+SC P+ + RASD+GL+K Sbjct: 61 LTSDAGPDTLVRPNHPFRRNYADPNEVAAVILGGGTGTQLFPLTSTRATPAVPIGGCYRLIDIPMSNCFNSGINKIFVMTQFNSASLNRHIHRTY-LGGGINFTDGSVEVLAATQMPGEAA-GWFQGTADAVRKFIWVLEDYYKHKAIEHILILSGDQLYRMDYMELVQKHVDDNADITLSCAPVGESRASDYGLVK 255
BLAST of FC878086 vs. ExPASy Swiss-Prot
Match: GLGL2_WHEAT (Glucose-1-phosphate adenylyltransferase large subunit, chloroplastic/amyloplastic OS=Triticum aestivum GN=AGP-L PE=2 SV=2) HSP 1 Score: 234.572 bits (597), Expect = 5.249e-61 Identity = 116/175 (66.29%), Postives = 138/175 (78.86%), Query Frame = 3 Query: 300 DARTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFGDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFED-PRNKVIEDVLILSGDHLYRMDYMDFVQNHRQSGADITISCLPMDDRRASDFGLMK 821 D VAAVILGGG GT+L+PLT RA PAVPIGG YRLID+PMSNC NSGINK++++TQ+NSASLNRH+ R Y G G+ F DG VEVLAATQ PGEA WF+GTADAVR+F W+ ED +NK IE +LILSGD LYRMDYM+ VQ H ADIT+SC P+ + RAS++GL+K Sbjct: 86 DPNEVAAVILGGGTGTQLFPLTSTRATPAVPIGGCYRLIDIPMSNCFNSGINKIFVMTQFNSASLNRHIHRTY-LGGGINFTDGSVEVLAATQMPGEAA-GWFRGTADAVRKFIWVLEDYYKNKSIEHILILSGDQLYRMDYMELVQKHVDDNADITLSCAPVGESRASEYGLVK 258 The following BLAST results are available for this feature:
BLAST of FC878086 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 308
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878086 ID=FC878086; Name=FC878086; organism=Citrus clementina; type=EST; length=826bpback to top |