FC878166
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878166 vs. ExPASy Swiss-Prot
Match: RIK_ARATH (Protein RIK OS=Arabidopsis thaliana GN=RIK PE=1 SV=2) HSP 1 Score: 212.231 bits (539), Expect = 3.285e-54 Identity = 125/245 (51.02%), Postives = 155/245 (63.27%), Query Frame = 2 Query: 137 MTEDSHHTFSSDDSAISTDGSSQTRQRKKRKWDQPAESLLNFPLASFGISLXXXXXXXXXXXXXXXXXXXXXXXXSGATXXXXXXXXXXXXKFNQPKVQDELIIAREIVINDSESSVRYKLTKRQTQEEIQKCTGAVVITRGKYRPPNAPPDGEKPLYLHISAGA--HLKETAERILAVDHAAAMVEEMLKQ---GHAGFPTLQTVMGNGVQAMSTSVFLGFDADASLNIAARIRGTNVRFFFHL 856 MTED+ + +T+ +S+TRQR+KRKWD+PAE L+ +A S + K NQPK+QDE+IIAREIVIND+E+S+R++LTKR TQE+IQ+ TGAVVITRGKYRPPNAPPDGEKPLYLHISA A LKET ERILAVD AAAM+EEM+KQ G LQT V+ +ST V+LGF+AD S N+AARIRG N ++ H+ Sbjct: 1 MTEDNDEARVPLSDSSTTNDASRTRQRRKRKWDKPAEQLVAAGVA----------------FPQLLPLGNTMNVPSMSPLLQTLSVPLAVPKVNQPKIQDEVIIAREIVINDAEASLRHRLTKRSTQEDIQRSTGAVVITRGKYRPPNAPPDGEKPLYLHISAAAQLQLKETTERILAVDRAAAMIEEMMKQKSISQIGSVGLQT-----VKMLSTCVYLGFEADPSSNVAARIRGPNDQYINHI 224
BLAST of FC878166 vs. ExPASy Swiss-Prot
Match: RIK_MAIZE (Protein RIK OS=Zea mays PE=1 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 1.993e-51 Identity = 121/257 (47.08%), Postives = 148/257 (57.59%), Query Frame = 2 Query: 137 MTEDSHHTFSSDDSAISTDGSSQTRQRKKRKWDQPAESLLN----------FPLASFGI--SLXXXXXXXXXXXXXXXXXXXXXXXXSGATXXXXXXXXXXXXKFNQPKVQDELIIAREIVINDSESSVRYKLTKRQTQEEIQKCTGAVVITRGKYRPPNAPPDGEKPLYLHISAGAHLKETAERILAVDHAAAMVEEMLKQGHAG---FPTLQTVMGNGVQAMSTSVFLGFDADASLNIAARIRGTNVRFFFHLFQ 862 MTED H + + +A Q+ +RKKRKWDQPAE L++ P+ +FG + K +Q K+ DE +IAREIVIND++ SVRYKLTKRQTQEEIQKCT V+ITRGKY PPN PDGEKPLYLHISAG+ LK+TAERI AVD AA+M+EE+LKQG + G V+ S SVFLGFDAD SLNI ARIRG N ++ H+ + Sbjct: 1 MTEDRAHKVADEPAA----SGRQSPERKKRKWDQPAEDLVSAAVTAAAVSGMPVMNFGALPGVVLPGVTAYGAATLPSVVPVPYSLPPHIAPSVLQNAAAAAQKLSQAKIPDE-VIAREIVINDADPSVRYKLTKRQTQEEIQKCTNTVIITRGKYHPPNLLPDGEKPLYLHISAGSQLKDTAERIKAVDRAASMIEEILKQGTTSESISVPFSSSTGQAVRPFSASVFLGFDADPSLNITARIRGPNDQYINHIMK 252 The following BLAST results are available for this feature:
BLAST of FC878166 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878166 ID=FC878166; Name=FC878166; organism=Citrus clementina; type=EST; length=913bpback to top |