FC878174
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878174 vs. ExPASy Swiss-Prot
Match: PEL59_SOLLC (Probable pectate lyase P59 OS=Solanum lycopersicum GN=LAT59 PE=2 SV=1) HSP 1 Score: 264.233 bits (674), Expect = 7.090e-70 Identity = 131/267 (49.06%), Postives = 173/267 (64.79%), Query Frame = 1 Query: 109 LSAIAEADEVWRRRAEEAMQTTEQYYDPDPVAVASNLNMKVQDLSKQ---------TAARRGLLNAE-SGQCEATNPIDKCWRCKENWAEDRQALAGCALXXXXXXXXXXXXXIYEVTDSSDNNMENPKVGTLRHAVIQKEPLWIIFAKDMNIKLQQELVVQGNKTIDGRGANVHIANGAGIRLQFVQNVXXXXXXXXXXSPASGGMIRDSVDHVGNRGPSDGDAVSVFGSSNIWLDHLTLSKAQDGLIDAIQGSTAITISNCHLSN 879 ++ I DEVWRRRAEEA + Y+P P V N K++D K+ + RRGL + +G C TNPIDKCWRC NWA++R+ LA CA+ Y VTD+SD+ +PK GTLRHAVIQKEPLWIIF + MNI+L QE+++Q +KTID RG NVHI GAGI LQ+++NV +GGM+RD+VDH+G R SDGD +S+FG+S IW+DH+++ + DGLIDA++GST ITISN H ++ Sbjct: 25 MAHIGHYDEVWRRRAEEAKEYARNIYEPHPENVTLAFNQKLRDTMKELKKVKGTHNNSTRRGLGTKKYTGPCMVTNPIDKCWRCDPNWADNRKKLADCAMGFGSKAIGGKDGEFYVVTDNSDD-YNDPKPGTLRHAVIQKEPLWIIFKRGMNIRLHQEMIMQSDKTIDARGVNVHITKGAGITLQYIKNVIIHGLHIHDIVEGNGGMVRDAVDHIGIRTKSDGDGISIFGASYIWIDHVSMQRCYDGLIDAVEGSTGITISNGHFTD 290
BLAST of FC878174 vs. ExPASy Swiss-Prot
Match: PEL_LILLO (Pectate lyase OS=Lilium longiflorum PE=2 SV=1) HSP 1 Score: 255.373 bits (651), Expect = 3.293e-67 Identity = 125/253 (49.41%), Postives = 162/253 (64.03%), Query Frame = 1 Query: 118 IAEADEVWRRRAEEAMQTTEQYYDPDPVAVASNLNMKVQDLSKQTAARRGLLNAESGQCEATNPIDKCWRCKENWAEDRQALAGCALXXXXXXXXXXXXXIYEVTDSSDNNMENPKVGTLRHAVIQKEPLWIIFAKDMNIKLQQELVVQGNKTIDGRGANVHIANGAGIRLQFVQNVXXXXXXXXXXSPASGGMIRDSVDHVGNRGPSDGDAVSVFGSSNIWLDHLTLSKAQDGLIDAIQGSTAITISNCHLS 876 IAE DE W+++++ A ++ Y P P V ++ N V + + RR L + GQC ATNPID+CWRCK+NW+ +R+ L C IY VTD SD+++ +PK GTLR VIQ PLWIIF K M I+L+QEL++ +KTIDGRGANV IA GA + +QFV NV P GG+IRDS H G R SDGD +S+ GSSNIW+DH++L++ DGLID I GSTAITISNCHL+ Sbjct: 24 IAEFDEYWQKKSKVAQAKAKKAYTPHPEEVTNHFNKAVHSSFEGNSTRRNLRTNKLGQCLATNPIDRCWRCKKNWSANRKDLVKCVKGFGRKTTGGAAGEIYVVTDPSDDSLTDPKFGTLRWGVIQDRPLWIIFGKSMVIRLKQELIINNDKTIDGRGANVQIAGGAQLTVQFVHNVIIHGIHIHDIKPGEGGLIRDSEKHSGIRTRSDGDGISIIGSSNIWIDHVSLARCSDGLIDVILGSTAITISNCHLT 276
BLAST of FC878174 vs. ExPASy Swiss-Prot
Match: PEL19_ARATH (Putative pectate lyase 19 OS=Arabidopsis thaliana GN=At5g15110 PE=2 SV=1) HSP 1 Score: 255.373 bits (651), Expect = 3.293e-67 Identity = 135/288 (46.88%), Postives = 171/288 (59.38%), Query Frame = 1 Query: 118 IAEADEVWRRRAEEAMQTTEQYYDPDPVAVASNLNMKVQD--------------------------LSKQTAARRGLLNAES--------GQCEATNPIDKCWRCKENWAEDRQALAGCALXXXXXXXXXXXXXIYEVTDSSDNNMENPKVGTLRHAVIQKEPLWIIFAKDMNIKLQQELVVQGNKTIDGRGANVHIANGAGIRLQFVQNVXXXXXXXXXXSPASGGMIRDSVDHVGNRGPSDGDAVSVFGSSNIWLDHLTLSKAQDGLIDAIQGSTAITISNCHLSN 879 I+E DE W +RA+EA + T Q Y DP + + + + D L T + R L + G C A+NPIDKCWRC+ +WA+ R+ L C IY VT + D +M NPK GTLRHAVIQKEPLWIIF DM+I+L QEL++ +KTID RGANVH+A+GAGI +QFV+NV S +SGGMIRDSVDH G R +DGD +S++GSSNIWLDH+++SK QDGLIDAI GST ITISN H ++ Sbjct: 26 ISELDEYWSQRADEAREFTLQAYHSDPYEIVDHFHERHYDNSTDVTTPEEDGDAKPEEEEKEFIEMLGSSTNSTRRSLRGKGKGKWSKLKGPCTASNPIDKCWRCRSDWAKRRKKLTRCVRGFGHRTTGGKRGRIYVVTSNLDEDMVNPKPGTLRHAVIQKEPLWIIFKNDMSIRLNQELLINSHKTIDARGANVHVAHGAGITMQFVKNVIIHGLHIHHISESSGGMIRDSVDHFGMRTRADGDGLSIYGSSNIWLDHISMSKCQDGLIDAIVGSTGITISNSHFTH 313
BLAST of FC878174 vs. ExPASy Swiss-Prot
Match: PEL7_ARATH (Probable pectate lyase 7 OS=Arabidopsis thaliana GN=At3g01270 PE=2 SV=1) HSP 1 Score: 247.284 bits (630), Expect = 8.968e-65 Identity = 130/288 (45.14%), Postives = 168/288 (58.33%), Query Frame = 1 Query: 124 EADEVWRRRAEEAMQTTEQYYDPDPV------------------------AVASNLNMKVQDLSKQTAARRGLLNAE------------SGQCEATNPIDKCWRCKENWAEDRQALAGCALXXXXXXXXXXXXXIYEVTDSSDNNMENPKVGTLRHAVIQKEPLWIIFAKDMNIKLQQELVVQGNKTIDGRGANVHIANGAGIRLQFVQNVXXXXXXXXXXSPASGGMIRDSVDHVGNRGPSDGDAVSVFGSSNIWLDHLTLSKAQDGLIDAIQGSTAITISNCHLSN 879 E DE W +A EA + T Y PDP AVAS ++ +S T + R L +G C A+NPIDKCWRC+ +WA R+ L C IY VT D++M NP+ GTLRHAVIQKEPLWI+F DM+I+L QEL++ +KTID RGANVHIA GAGI +Q+V N+ +SGG+IRDS++H G+RG +DGD +S+FG++NIWLDH+++SK QDGLIDAI GSTAITISN H ++ Sbjct: 29 ETDEYWVNKANEARKHTLMAYHPDPYEIVDHFHERHYDNSTDVEGTEEEKAVASEEEDVIEMISSPTNSTRRSLTGRGKGKGKGKWSKLTGPCTASNPIDKCWRCQPDWARRRKKLVHCVRGFGYRTTGGKRGRIYVVTSPRDDDMVNPRPGTLRHAVIQKEPLWIVFKHDMSIRLSQELMITSDKTIDARGANVHIAYGAGITMQYVHNIIIHGLHVHHIVKSSGGLIRDSINHFGHRGEADGDGISIFGATNIWLDHISMSKCQDGLIDAIMGSTAITISNSHFTH 316
BLAST of FC878174 vs. ExPASy Swiss-Prot
Match: PEL3_ARATH (Probable pectate lyase 3 OS=Arabidopsis thaliana GN=AT59 PE=2 SV=1) HSP 1 Score: 244.588 bits (623), Expect = 5.813e-64 Identity = 126/266 (47.37%), Postives = 166/266 (62.41%), Query Frame = 1 Query: 118 IAEADEVWRRRAEEAMQTTEQYYDPDPVAVASNLNMKVQ---DLSKQ--------TAARRGL-LNAESGQCEATNPIDKCWRCKENWAEDRQALAGCALXXXXXXXXXXXXXIYEVTDSSDNNMENPKVGTLRHAVIQKEPLWIIFAKDMNIKLQQELVVQGNKTIDGRGANVHIANGAGIRLQFVQNVXXXXXXXXXXSPASGGMIRDSVDHVGNRGPSDGDAVSVFGSSNIWLDHLTLSKAQDGLIDAIQGSTAITISNCHLSN 879 +A D W +R +A++ T YDP P+ V ++ N V D S+ T R G + SG+C A NPID CWRC NWA +R+ LA C L IY V D+SDN++ NPK GTLRHAV + PLWIIFA+ M IKLQQEL++ +KTIDGRGA V+I GAG+ LQFV NV P +GG+IRDS H+G R SDGD +S+FG++NIW+DH+++++ DG+IDAI GSTA+TISN H ++ Sbjct: 31 VAVFDSYWTQRQSDALKQTIGSYDPHPLNVTNHFNYHVNIAVDASESRNDTRRELTQVRSGRKTHKSSGKCLAYNPIDNCWRCDRNWANNRKKLADCVLGFGRRTTGGKDGPIYVVKDASDNDLINPKPGTLRHAVTRDGPLWIIFARSMIIKLQQELMITSDKTIDGRGARVYIMEGAGLTLQFVNNVIIHNIYVKHIVPGNGGLIRDSEAHIGLRTKSDGDGISLFGATNIWIDHVSMTRCADGMIDAIDGSTAVTISNSHFTD 296
BLAST of FC878174 vs. ExPASy Swiss-Prot
Match: PEL_TOBAC (Pectate lyase OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 235.728 bits (600), Expect = 2.700e-61 Identity = 113/208 (54.33%), Postives = 143/208 (68.75%), Query Frame = 1 Query: 259 RRGLLNAE-SGQCEATNPIDKCWRCKENWAEDRQALAGCALXXXXXXXXXXXXXIYEVTDSSDNNMENPKVGTLRHAVIQKEPLWIIFAKDMNIKLQQELVVQGNKTIDGRGANVHIANGAGIRLQFVQNVXXXXXXXXXXSPASGGMIRDSVDHVGNRGPSDGDAVSVFGSSNIWLDHLTLSKAQDGLIDAIQGSTAITISNCHLSN 879 RR L N + G C A N IDKCWRC NWAE+RQ +A CAL IY VTD+SD+++ +PK GTLR+ VIQKEPLWIIF K+M IKL +EL+V NKTIDGRG NVHI NGAGI++Q N+ P GG++R+S DHVG RG +GD +S+F S +IW+DH+++S+A DGLIDA+ ST ITISNCH ++ Sbjct: 30 RRQLSNKKYKGPCRAENAIDKCWRCDPNWAENRQKMADCALGFGSNAIGGKLGRIYVVTDNSDDDVVDPKPGTLRYGVIQKEPLWIIFGKNMKIKLSRELIVTSNKTIDGRGFNVHIQNGAGIKIQSASNIIISNLRIHNIVPTPGGLLRESEDHVGLRGSDEGDGISIFSSHDIWIDHISMSRATDGLIDAVAASTNITISNCHFTD 237
BLAST of FC878174 vs. ExPASy Swiss-Prot
Match: PEL56_SOLLC (Probable pectate lyase P56 OS=Solanum lycopersicum GN=LAT56 PE=2 SV=2) HSP 1 Score: 229.565 bits (584), Expect = 1.935e-59 Identity = 111/209 (53.11%), Postives = 140/209 (66.99%), Query Frame = 1 Query: 253 AARRGLLNAESGQCEATNPIDKCWRCKENWAEDRQALAGCALXXXXXXXXXXXXXIYEVTDSSDNNMENPKVGTLRHAVIQKEPLWIIFAKDMNIKLQQELVVQGNKTIDGRGANVHIANGAGIRLQFVQNVXXXXXXXXXXSPASGGMIRDSVDHVGNRGPSDGDAVSVFGSSNIWLDHLTLSKAQDGLIDAIQGSTAITISNCHLSN 879 A RR L G C A N IDKCWRC WAEDRQ +A CAL Y VTD+SD+++ +PK GTLR VIQK PLWI FA+ M I+L +EL+V NKTIDGRG VHIANGAGI++Q NV P +GG++R+S DH+G RG +GDA+S+F S +IW+DH+++S+A DGLIDA+ GST ITISNCH ++ Sbjct: 30 APRRKLTKKYRGPCMAVNSIDKCWRCDPFWAEDRQKMADCALGFGINAMGGKYGPYYIVTDNSDDDVVDPKPGTLRFGVIQKGPLWITFARSMRIRLTRELIVSSNKTIDGRGKYVHIANGAGIKIQSASNVIISNLRIHNIVPTAGGLLRESDDHLGLRGADEGDAISIFNSHDIWIDHISMSRATDGLIDAVAGSTNITISNCHFTD 238
BLAST of FC878174 vs. ExPASy Swiss-Prot
Match: PEL6_ARATH (Probable pectate lyase 6 OS=Arabidopsis thaliana GN=At2g02720 PE=2 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 2.527e-59 Identity = 117/266 (43.98%), Postives = 160/266 (60.15%), Query Frame = 1 Query: 118 IAEADEVWRRRAEEAMQTTEQYYDPDPVAVASNLN------MKVQDLSKQT------AARRGLLNAESGQCEATNPIDKCWRCKENWAEDRQALAGCALXXXXXXXXXXXXXIYEVTDSSDNNMENPKVGTLRHAVIQKEPLWIIFAKDMNIKLQQELVVQGNKTIDGRGANVHIANGAGIRLQFVQNVXXXXXXXXXXSPASGGMIRDSVDHVGNRGPSDGDAVSVFGSSNIWLDHLTLSKAQDGLIDAIQGSTAITISNCHLSN 879 IAE DE W +R A++ T + YDP+P V + N M+ + +T R G+ E+ N IDKCWR +NW ++R+ LA C L IY VTD SDN++ PK GT+RHAV + PLWIIFA+ M IKLQQEL++ +KTIDGRGA ++I GAG+ LQFV+NV +GG+I DS H G R SDGD +++FG++N+W+DH++++ DG+IDAI GSTAITISN H ++ Sbjct: 27 IAEYDEYWTQRQTNALRETLESYDPNPENVTDHFNYHAALAMETTGIVNETRRDLRQVGRGKKTTRRGGRFESLNAIDKCWRGDKNWDKNRKKLADCVLGFGRKTTGGKNGPIYVVTDPSDNDLLKPKPGTIRHAVTRDRPLWIIFARSMIIKLQQELIITNDKTIDGRGAKIYITGGAGLTLQFVRNVIIHNIHIKQIKRGAGGLIIDSEQHFGLRTVSDGDGINIFGATNVWIDHVSMTDCSDGMIDAIMGSTAITISNSHFTD 292
BLAST of FC878174 vs. ExPASy Swiss-Prot
Match: PEL5_ARATH (Probable pectate lyase 5 OS=Arabidopsis thaliana GN=At1g67750 PE=2 SV=2) HSP 1 Score: 218.779 bits (556), Expect = 3.416e-56 Identity = 115/223 (51.57%), Postives = 143/223 (64.13%), Query Frame = 1 Query: 211 SNLNMKVQDLSKQTAARRGLLNAESGQCEATNPIDKCWRCKENWAEDRQALAGCALXXXXXXXXXXXXXIYEVTDSSDNNMENPKVGTLRHAVIQKEPLWIIFAKDMNIKLQQELVVQGNKTIDGRGANVHIANGAGIRLQFVQNVXXXXXXXXXXSPASGGMIRDSVDHVGNRGPSDGDAVSVFGSSNIWLDHLTLSKAQDGLIDAIQGSTAITISNCHLSN 879 S + VQ+++++ A R L S C NPID CWRC W ++RQ LA CA+ IY VTDSSD ++ NPK GTLRHAVIQ EPLWIIFA+DM IKL++EL++ KTIDGRGA+VHIA GA I +Q+V N+ +RDS H G R SDGDAVS+FG S++W+DH +LS DGLIDAI GSTAITISN +LS+ Sbjct: 31 SEPELVVQEVNEKINASRRNLGVLS--CGTGNPIDDCWRCDPKWEKNRQRLADCAIGFGKHAIGGRDGKIYVVTDSSDKDVVNPKPGTLRHAVIQDEPLWIIFARDMVIKLKEELIMNSFKTIDGRGASVHIAGGACITVQYVTNIIIHGVNIHDCKRKGNAYVRDSPSHYGWRTASDGDAVSIFGGSHVWVDHCSLSNCADGLIDAIHGSTAITISNNYLSH 251
BLAST of FC878174 vs. ExPASy Swiss-Prot
Match: PEL15_ARATH (Probable pectate lyase 15 OS=Arabidopsis thaliana GN=At4g13710 PE=2 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 1.298e-55 Identity = 111/229 (48.47%), Postives = 141/229 (61.57%), Query Frame = 1 Query: 193 DPVAVASNLNMKVQDLSKQTAARRGLLNAESGQCEATNPIDKCWRCKENWAEDRQALAGCALXXXXXXXXXXXXXIYEVTDSSDNNMENPKVGTLRHAVIQKEPLWIIFAKDMNIKLQQELVVQGNKTIDGRGANVHIANGAGIRLQFVQNVXXXXXXXXXXSPASGGMIRDSVDHVGNRGPSDGDAVSVFGSSNIWLDHLTLSKAQDGLIDAIQGSTAITISNCHLSN 879 DP VA + VQ + ARR L C NPID CWRC NW ++R+ LA C + Y VTD +D ++ NPK GTLRHAVIQ+EPLWI+F +DM I+L+QEL++ KTID RG+NVHIANGA I +QF+ NV P M+R S H G R +DGDAVS+FGSS+IW+DH +LS DGL+DA+ GSTAIT+SN H ++ Sbjct: 88 DPDMVADEVAKLVQMSEQNRTARRKL---GFFSCGTGNPIDDCWRCDRNWHKNRKRLADCGIGFGRNAIGGRDGRFYIVTDPTDEDVVNPKPGTLRHAVIQEEPLWIVFKRDMVIELKQELIMNSFKTIDARGSNVHIANGACITIQFITNVIIHGLHIHDCKPTGNAMVRSSPSHFGWRTMADGDAVSIFGSSHIWIDHNSLSHCADGLVDAVMGSTAITVSNNHFTH 313 The following BLAST results are available for this feature:
BLAST of FC878174 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878174 ID=FC878174; Name=FC878174; organism=Citrus clementina; type=EST; length=899bpback to top |