FC878176
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878176 vs. ExPASy Swiss-Prot
Match: PUB21_ARATH (U-box domain-containing protein 21 OS=Arabidopsis thaliana GN=PUB21 PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 4.931e-34 Identity = 92/255 (36.08%), Postives = 144/255 (56.47%), Query Frame = 2 Query: 152 ETGASLIEKDPVTTTPRNGITYDRVNILIENERIIPVCSVEVLEINSKIKTACETQDQVGCKDLVAKIKEWAKESESNKSCIVDNAAVSVLAAAFESFSKTCLDENVS-VLEEILSTLILLFPLEGEALTHLGSASSMGCMIWFLNSGDLSRRRNAVLLLTELVSSDSDQRKVNVLSENEGAIEALFKLIEEPISPTATKAALVVIYHTIASSASVNEKLIQKFVDMGLVSLLLEMLVDAQRSVCEKALSVLDGI 913 E G+ LI++ P TPR +P+ EV EI+ K+ +A D C ++ KIK+ ESE N+ C+ +N+ VL F+ FS DE ++ +L EILS L +FP+ E ++ L SA+S C+ L S D S R+NA ++ E++S D + +V+ + G EAL KLI + +S ++TK++L+ IY + + +F+++GLVS+ +EM+VDA+ SVCEKAL+VLD I Sbjct: 100 EKGSPLIQRIP---TPR-----------------VPLMPCEVYEISRKLSSATRRGDYEKCGVIIEKIKKLGDESEKNRKCVNENSVGWVLCDCFDKFSG---DEKLTFMLNEILSLLTWMFPIGLEGISKLASATSFRCVAGLLKSTDDSVRQNAAFIMKEILSLD--ETRVHSFAVENGVAEALVKLIRDSVSSSSTKSSLIAIYQMVLQKPEI----ASEFLEIGLVSITVEMIVDAENSVCEKALAVLDAI 325
BLAST of FC878176 vs. ExPASy Swiss-Prot
Match: PUB20_ARATH (U-box domain-containing protein 20 OS=Arabidopsis thaliana GN=PUB20 PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 3.542e-24 Identity = 74/221 (33.48%), Postives = 124/221 (56.11%), Query Frame = 2 Query: 254 IPVCSVEVLEINSKIKTACETQDQVGCKDLVAKIKEWAKESESNKSCIVDNAAVSVLAAAFESFSKTCLDENVS-VLEEILSTLILLFPLEGEALTHLGSASSMGCMIWFLNSGDLSRRRNAVLLLTELVSSDSDQRKVNVLSENEGAIEALFKLIEEPISPTATKAALVVIYHTIASSASVNEKLIQKFVDMGLVSLLLEMLVDAQRSVCEKALSVLDGI 913 +PV S +V EI ++ A D C ++V K+ KESE N+ C+ +N A VL F++FS+ + N S +LEE +S L + P+ E + L + SS ++ L +GD +NA L+ EL+ + + V+ L++ G EA K I + +L+ I+H I + N++ + +F+++ LV++ +EMLVD++ SVCEKAL+VL+ I Sbjct: 116 VPVTSHQVSEICERLSAATRRGDYAACMEMVTKMTRLGKESERNRKCVKENGAGLVLCVCFDAFSE---NANASLLLEETVSVLTWMLPIGLEGQSKLTTTSSFNRLVELLRNGD----QNAAFLIKELL--ELNVTHVHALTKINGVQEAFMKSINR---DSTCVNSLISIHHMILT----NQETVSRFLELDLVNITVEMLVDSENSVCEKALTVLNVI 320 The following BLAST results are available for this feature:
BLAST of FC878176 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878176 ID=FC878176; Name=FC878176; organism=Citrus clementina; type=EST; length=915bpback to top |