FC878216
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878216 vs. ExPASy Swiss-Prot
Match: VSR4_ARATH (Vacuolar-sorting receptor 4 OS=Arabidopsis thaliana GN=VSR4 PE=2 SV=2) HSP 1 Score: 428.328 bits (1100), Expect = 2.776e-119 Identity = 199/234 (85.04%), Postives = 217/234 (92.74%), Query Frame = 2 Query: 185 SRFVVEKNSLMVTSPEKIKGSHDSAIGNFGIPQYGGSMAGAVTYPKENRKGCREFGDFGISFKAKPGALPNFVLVDRGDCFFALKVWNAQKAGASAVLVADDIEEALITMDTPEEDISSAKYIENITIPSALIDKSFGETLKKALSGGEMVNVNLDWREAVPHPDDRVEYELWTNSNDECGVKCDMLMAFVKEFRGPAQILEKGGYTQFTPHYITWYCPMTFTLSRQCKSQCIN 886 +RFVVEKNSL VTSPE IKG+HDSAIGNFGIPQYGGSMAG V YPKEN+K C+EF DF ISFK++PGALP F+LVDRGDCFFALKVWNAQKAGASAVLVAD+++E LITMDTPEED+SSAKYIENITIPSAL+ K FGE LKKA+SGG+MVN+NLDWREAVPHPDDRVEYELWTNSNDECGVKCDMLM FVK+F+G AQILEKGG+TQF PHYITWYCP FTLSRQCKSQCIN Sbjct: 24 ARFVVEKNSLSVTSPESIKGTHDSAIGNFGIPQYGGSMAGTVVYPKENQKSCKEFSDFSISFKSQPGALPTFLLVDRGDCFFALKVWNAQKAGASAVLVADNVDEPLITMDTPEEDVSSAKYIENITIPSALVTKGFGEKLKKAISGGDMVNLNLDWREAVPHPDDRVEYELWTNSNDECGVKCDMLMEFVKDFKGAAQILEKGGFTQFRPHYITWYCPHAFTLSRQCKSQCIN 257
BLAST of FC878216 vs. ExPASy Swiss-Prot
Match: VSR3_ARATH (Vacuolar-sorting receptor 3 OS=Arabidopsis thaliana GN=VSR3 PE=2 SV=1) HSP 1 Score: 428.328 bits (1100), Expect = 2.776e-119 Identity = 199/234 (85.04%), Postives = 217/234 (92.74%), Query Frame = 2 Query: 185 SRFVVEKNSLMVTSPEKIKGSHDSAIGNFGIPQYGGSMAGAVTYPKENRKGCREFGDFGISFKAKPGALPNFVLVDRGDCFFALKVWNAQKAGASAVLVADDIEEALITMDTPEEDISSAKYIENITIPSALIDKSFGETLKKALSGGEMVNVNLDWREAVPHPDDRVEYELWTNSNDECGVKCDMLMAFVKEFRGPAQILEKGGYTQFTPHYITWYCPMTFTLSRQCKSQCIN 886 +RFVVEKNSL VTSPE IKG+HDSAIGNFGIPQYGGSMAG V YPKEN+K C+EF DF ISFK++PGALP F+LVDRGDCFFALKVWNAQKAGASAVLVAD+++E LITMDTPEED+SSAKYIENITIPSAL+ K FGE LKKA+SGG+MVN+NLDWREAVPHPDDRVEYELWTNSNDECGVKCDMLM FVK+F+G AQILEKGG+TQF PHYITWYCP FTLSRQCKSQCIN Sbjct: 24 ARFVVEKNSLSVTSPESIKGTHDSAIGNFGIPQYGGSMAGTVVYPKENQKSCKEFSDFSISFKSQPGALPTFLLVDRGDCFFALKVWNAQKAGASAVLVADNVDEPLITMDTPEEDVSSAKYIENITIPSALVTKGFGEKLKKAISGGDMVNLNLDWREAVPHPDDRVEYELWTNSNDECGVKCDMLMEFVKDFKGAAQILEKGGFTQFRPHYITWYCPHAFTLSRQCKSQCIN 257
BLAST of FC878216 vs. ExPASy Swiss-Prot
Match: VSR1_PEA (Vacuolar-sorting receptor 1 OS=Pisum sativum GN=BP80 PE=1 SV=1) HSP 1 Score: 417.542 bits (1072), Expect = 4.901e-116 Identity = 199/236 (84.32%), Postives = 214/236 (90.68%), Query Frame = 2 Query: 179 SVSRFVVEKNSLMVTSPEKIKGSHDSAIGNFGIPQYGGSMAGAVTYPKENRKGCREFGDFGISFKAKPGALPNFVLVDRGDCFFALKVWNAQKAGASAVLVADDIEEALITMDTPEEDISSAKYIENITIPSALIDKSFGETLKKALSGGEMVNVNLDWREAVPHPDDRVEYELWTNSNDECGVKCDMLMAFVKEFRGPAQILEKGGYTQFTPHYITWYCPMTFTLSRQCKSQCIN 886 S +RFVVEKNSL VTSPEKIKG HDSAIGNFGIPQYGGSMAG V YPK+N KGC+ DF SFK++PGALP +L+DRG CFFALKVWNAQKAGASAVLVADDIEE LITMDTPEED+SSAKYIENITIPSALI KSFGE LK A+SGG+MVNVNLDWREAVPHPDDRVEYELWTNSNDECGVKCDML+ F+K+F+G AQILEKGGYTQFTPHYITWYCP FTLS+QCKSQCIN Sbjct: 20 STARFVVEKNSLSVTSPEKIKGKHDSAIGNFGIPQYGGSMAGNVVYPKDNSKGCK---DFDSSFKSRPGALPTILLLDRGSCFFALKVWNAQKAGASAVLVADDIEEPLITMDTPEEDVSSAKYIENITIPSALIGKSFGEKLKDAISGGDMVNVNLDWREAVPHPDDRVEYELWTNSNDECGVKCDMLIEFLKDFKGAAQILEKGGYTQFTPHYITWYCPHAFTLSKQCKSQCIN 252
BLAST of FC878216 vs. ExPASy Swiss-Prot
Match: VSR1_ARATH (Vacuolar-sorting receptor 1 OS=Arabidopsis thaliana GN=VSR1 PE=1 SV=2) HSP 1 Score: 367.081 bits (941), Expect = 7.596e-101 Identity = 165/239 (69.04%), Postives = 200/239 (83.68%), Query Frame = 2 Query: 170 VHTSVSRFVVEKNSLMVTSPEKIKGSHDSAIGNFGIPQYGGSMAGAVTYPKENRKGCREFGDFGISFKAKPGALPNFVLVDRGDCFFALKVWNAQKAGASAVLVADDIEEALITMDTPEEDISSAKYIENITIPSALIDKSFGETLKKALSGGEMVNVNLDWREAVPHPDDRVEYELWTNSNDECGVKCDMLMAFVKEFRGPAQILEKGGYTQFTPHYITWYCPMTFTLSRQCKSQCIN 886 ++ ++ RFVVEKN+L VTSP+ IKG ++ AIGNFG+PQYGG++ G V YPK N+K C+ + DF ISFK+KPG LP FVL+DRGDC+F LK W AQ+AGA+A+LVAD E LITMDTPEED S A Y++NITIPSALI K+ G+++K ALSGG+MVN+ LDW E+VPHPD+RVEYELWTNSNDECG KCD + F+K F+G AQILEKGG+TQFTPHYITWYCP FTLS+QCKSQCIN Sbjct: 14 LNLAMGRFVVEKNNLKVTSPDSIKGIYECAIGNFGVPQYGGTLVGTVVYPKSNQKACKSYSDFDISFKSKPGRLPTFVLIDRGDCYFTLKAWIAQQAGAAAILVADSKAEPLITMDTPEEDKSDADYLQNITIPSALITKTLGDSIKSALSGGDMVNMKLDWTESVPHPDERVEYELWTNSNDECGKKCDTQIEFLKNFKGAAQILEKGGHTQFTPHYITWYCPEAFTLSKQCKSQCIN 252
BLAST of FC878216 vs. ExPASy Swiss-Prot
Match: VSR2_ARATH (Vacuolar-sorting receptor 2 OS=Arabidopsis thaliana GN=VSR2 PE=2 SV=1) HSP 1 Score: 346.665 bits (888), Expect = 1.062e-94 Identity = 154/233 (66.09%), Postives = 191/233 (81.97%), Query Frame = 2 Query: 188 RFVVEKNSLMVTSPEKIKGSHDSAIGNFGIPQYGGSMAGAVTYPKENRKGCREFGDFGISFKAKPGALPNFVLVDRGDCFFALKVWNAQKAGASAVLVADDIEEALITMDTPEEDISSAKYIENITIPSALIDKSFGETLKKALSGGEMVNVNLDWREAVPHPDDRVEYELWTNSNDECGVKCDMLMAFVKEFRGPAQILEKGGYTQFTPHYITWYCPMTFTLSRQCKSQCIN 886 RFVVEKN+L VTSPE I+G ++ A+GNFG+PQYGGSM+GAV YPK N+K C+ F DF ISF+++ LP FVLVDRGDC+F LK WNAQ+AGA+ +LVAD+ E LITMD PE++ S A Y++NITIPSAL+ +S G +K A++ G+ V+++LDWREA+PHP+DRV YELWTNSNDECG KCD + F+K F+G AQILEKGGYT+FTPHYITWYCP F SRQCK+QCIN Sbjct: 24 RFVVEKNNLRVTSPESIRGVYECALGNFGVPQYGGSMSGAVVYPKTNQKACKNFDDFEISFRSRVAGLPTFVLVDRGDCYFTLKAWNAQRAGAATILVADNRPEQLITMDAPEDETSDADYLQNITIPSALVSRSLGSAIKTAIAHGDPVHISLDWREALPHPNDRVAYELWTNSNDECGSKCDAQIRFLKRFKGAAQILEKGGYTRFTPHYITWYCPEAFLASRQCKTQCIN 256
BLAST of FC878216 vs. ExPASy Swiss-Prot
Match: VSR7_ARATH (Vacuolar-sorting receptor 7 OS=Arabidopsis thaliana GN=VSR7 PE=2 SV=2) HSP 1 Score: 297.36 bits (760), Expect = 7.392e-80 Identity = 138/234 (58.97%), Postives = 173/234 (73.93%), Query Frame = 2 Query: 185 SRFVVEKNSLMVTSPEKIKGSHDSAIGNFGIPQYGGSMAGAVTYPKENRKGCREFGDFGISFKAKPGALPNFVLVDRGDCFFALKVWNAQKAGASAVLVADDIEEALITMDTPEEDISSAKYIENITIPSALIDKSFGETLKKALSGGEMVNVNLDWREAVPHPDDRVEYELWTNSNDECGVKCDMLMAFVKEFRGPAQILEKGGYTQFTPHYITWYCPMTFTLSRQCKSQCIN 886 +RFVVEK S+ V +PE+++ HD +I NFG+P YGG + G+V YP GC FG +FK K P +L+DRG C+FALK W+AQ+AGA+AVLVAD+++E L+TMD+PEE + +IE +TIPS LIDKSFG+ L++ G+ + + LDWRE+VPHPD RVEYELWTNSNDECG +CD M FVK F+G AQILEKGGYT FTPHYITW+CP F S CKSQCIN Sbjct: 26 ARFVVEKESISVLNPEEMRSKHDGSIANFGLPDYGGFLIGSVVYPDSKTDGCSAFGK---TFKPK-FPRPTILLLDRGGCYFALKAWHAQQAGAAAVLVADNVDEPLLTMDSPEESKDADGFIEKLTIPSVLIDKSFGDDLRQGFQKGKNIVIKLDWRESVPHPDKRVEYELWTNSNDECGARCDEQMDFVKNFKGHAQILEKGGYTAFTPHYITWFCPFQFINSPHCKSQCIN 255
BLAST of FC878216 vs. ExPASy Swiss-Prot
Match: VSR6_ARATH (Vacuolar-sorting receptor 6 OS=Arabidopsis thaliana GN=VSR6 PE=2 SV=2) HSP 1 Score: 288.115 bits (736), Expect = 4.484e-77 Identity = 133/233 (57.08%), Postives = 172/233 (73.82%), Query Frame = 2 Query: 188 RFVVEKNSLMVTSPEKIKGSHDSAIGNFGIPQYGGSMAGAVTYPKENRKGCREFGDFGISFKAKPGALPNFVLVDRGDCFFALKVWNAQKAGASAVLVADDIEEALITMDTPEEDISSAKYIENITIPSALIDKSFGETLKKALSGGEMVNVNLDWREAVPHPDDRVEYELWTNSNDECGVKCDMLMAFVKEFRGPAQILEKGGYTQFTPHYITWYCPMTFTLSRQCKSQCIN 886 RF+VEK+S+ + +P ++ HD+AI NFG+P YGG M G+V Y + GC F +FK K P +++DRG+C+FALKVWN Q++G +AVLVAD+++E LITMD+PEE + +IE + IPSALID SF TLK+AL GE V + +DW E++PHPD+RVEYELWTN+NDECG +CD M FVK F+G AQILEKGGY+ FTPHYITW+CP + S QCKSQCIN Sbjct: 26 RFIVEKSSVTILNPLAMRSKHDAAIANFGVPNYGGYMIGSVVYAGQGAYGCDSFDK---TFKPK-FPRPTILIIDRGECYFALKVWNGQQSGVAAVLVADNVDEPLITMDSPEESKEADDFIEKLNIPSALIDFSFANTLKQALKKGEEVVLKIDWSESLPHPDERVEYELWTNTNDECGARCDEQMNFVKNFKGHAQILEKGGYSLFTPHYITWFCPKDYVSSNQCKSQCIN 254
BLAST of FC878216 vs. ExPASy Swiss-Prot
Match: VSR5_ARATH (Vacuolar-sorting receptor 5 OS=Arabidopsis thaliana GN=VSR5 PE=2 SV=1) HSP 1 Score: 269.24 bits (687), Expect = 2.156e-71 Identity = 128/234 (54.70%), Postives = 170/234 (72.65%), Query Frame = 2 Query: 185 SRFVVEKNSLMVTSPEKIKGSHDSAIGNFGIPQYGGSMAGAVTYPKENRKGCREFGDFGISFKAKPGALPNFVLVDRGDCFFALKVWNAQKAGASAVLVADDIEEALITMDTPEEDISSAKYIENITIPSALIDKSFGETLKKALSGGEMVNVNLDWREAVPHPDDRVEYELWTNSNDECGVKCDMLMAFVKEFRGPAQILEKGGYTQFTPHYITWYCPMTFTLSRQCKSQCIN 886 SRF VEK+SL V + ++ HD+AI NFG+P+YGG M G+V Y ++ GC F +F K P +L+DRG C FALK+WN Q++GA+AVL+AD+I E LITMDTP+++ +I+ + IPSALI +SFG++LKKAL GE V + +DW E++P+PD+RVEYELW N+NDECGV CD + F+K F+G AQILEKGGYT F PHYI+W CP LS+QC++QCIN Sbjct: 26 SRFFVEKSSLTVLNSWEMGAKHDAAIANFGLPKYGGFMIGSVVYAGQDAYGCNSFNK---TFNTK-SPYPKILLIDRGVCNFALKIWNGQQSGAAAVLLADNIVEPLITMDTPQDE--DPDFIDKVKIPSALILRSFGDSLKKALKRGEEVILKMDWSESIPNPDERVEYELWANTNDECGVHCDKQIDFIKNFKGMAQILEKGGYTLFRPHYISWVCPKELLLSKQCRTQCIN 253 The following BLAST results are available for this feature:
BLAST of FC878216 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878216 ID=FC878216; Name=FC878216; organism=Citrus clementina; type=EST; length=887bpback to top |