FC878222

Overview
NameFC878222
Unique NameFC878222
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length862
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig5701 contig Ccv1_Contig5701:1..862. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC878222 vs. ExPASy Swiss-Prot
Match: PMA1_NEUCR (Plasma membrane ATPase OS=Neurospora crassa GN=pma-1 PE=1 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 2.373e-43
Identity = 86/153 (56.21%), Postives = 115/153 (75.16%), Query Frame = 1
Query:  277 ADPG---FVPDEMLEADIKQGISSHEVEQRRKRYGWNEITTEKENLFIKFLGFFTGPVLYVMELAVLLAAGLRDWIDFGVIIGILLLNAVVGWYQEKQAADVVASLKGDIAMKATVVRDGQESDIKARELVPGDIIIIEEGESVPADARLICD 726
            A PG    VP++ML+ D + G++S EV QRR++YG N++  EKEN F+KFLGFF GP+ +VME A +LAAGL DW+DFGVI G+LLLNAVVG+ QE QA  +V  LK  +A+KA V+RDG   +I+A E+VPGDI+ +EEG  +PAD R++ D
Sbjct:   67 ATPGGGRVVPEDMLQTDTRVGLTSEEVVQRRRKYGLNQMKEEKENHFLKFLGFFVGPIQFVMEGAAVLAAGLEDWVDFGVICGLLLLNAVVGFVQEFQAGSIVDELKKTLALKAVVLRDGTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTD 219          
BLAST of FC878222 vs. ExPASy Swiss-Prot
Match: PMA2_SCHPO (Plasma membrane ATPase 2 OS=Schizosaccharomyces pombe GN=pma2 PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 8.439e-41
Identity = 85/156 (54.49%), Postives = 112/156 (71.79%), Query Frame = 1
Query:  253 GNSGAATGADPGFVPDEMLEADIKQGISSHEVEQRRKRYGWNEITTEKENLFIKFLGFFTGPVLYVMELAVLLAAGLRDWIDFGVIIGILLLNAVVGWYQEKQAADVVASLKGDIAMKATVVRDGQESDIKARELVPGDIIIIEEGESVPADARLI 720
            G +GAA       VP+E+LE D K G++  EVE+R+K+YG N++  EK N   KFL FF GP+ +VMELA  LAAGLRDW+DFGVI  +LLLNA VG+ QE QA  +V  LK  +A+KA+V+RDG+  +I+A E+VPGDI+ ++EG   PAD RLI
Sbjct:  153 GPAGAAK-----VVPEELLETDPKYGLTESEVEERKKKYGLNQMKEEKTNNIKKFLSFFVGPIQFVMELAAALAAGLRDWVDFGVICALLLLNATVGFVQEYQAGSIVDELKKTMALKASVLRDGRVKEIEASEIVPGDILHLDEGTICPADGRLI 303          
BLAST of FC878222 vs. ExPASy Swiss-Prot
Match: PMA1_SCHPO (Plasma membrane ATPase 1 OS=Schizosaccharomyces pombe GN=pma1 PE=1 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.880e-40
Identity = 77/155 (49.68%), Postives = 112/155 (72.26%), Query Frame = 1
Query:  256 NSGAATGADPGFVPDEMLEADIKQGISSHEVEQRRKRYGWNEITTEKENLFIKFLGFFTGPVLYVMELAVLLAAGLRDWIDFGVIIGILLLNAVVGWYQEKQAADVVASLKGDIAMKATVVRDGQESDIKARELVPGDIIIIEEGESVPADARLI 720
            N  A    +   VP+E+L+ D+  G++  EVE+RRK+YG N++  E EN F+KF+ FF GP+ +VME+A  LAAGLRDW+DFGVI  +L+LNAVVG+ QE QA  +V  LK  +A+KA V+R+GQ  +++A E+VPGDI+ ++EG  + AD R++
Sbjct:   61 NDDAPAAGEAKAVPEELLQTDMNTGLTMSEVEERRKKYGLNQMKEELENPFLKFIMFFVGPIQFVMEMAAALAAGLRDWVDFGVICALLMLNAVVGFVQEYQAGSIVDELKKSLALKAVVIREGQVHELEANEVVPGDILKLDEGTIICADGRVV 215          
BLAST of FC878222 vs. ExPASy Swiss-Prot
Match: PMA1_AJECA (Plasma membrane ATPase OS=Ajellomyces capsulata GN=PMA1 PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 2.455e-40
Identity = 80/155 (51.61%), Postives = 112/155 (72.26%), Query Frame = 1
Query:  262 GAATGADPGFVPDEMLEADIKQGISSHEVEQRRKRYGWNEITTEKENLFIKFLGFFTGPVLYVMELAVLLAAGLRDWIDFGVIIGILLLNAVVGWYQEKQAADVVASLKGDIAMKATVVRDGQESDIKARELVPGDIIIIEEGESVPADARLICD 726
            G   GA P  VPDE+L  D + G++  EV  RRK+YG N++  EKENL +KFL +F GP+ +VME A +LAAGL DW+DFGVI  +LLLNA VG+ QE QA  +V  LK  +A+KA V+R+G+ ++++A E+VPGDI+ +EEG  +PAD R++ +
Sbjct:   63 GEPGGARP--VPDELLTTDTRHGLTDAEVVARRKKYGLNQMKEEKENLVLKFLSYFVGPIQFVMEAAAILAAGLEDWVDFGVICALLLLNACVGFVQEFQAGSIVDELKKTLALKAVVLRNGRLTEVEAPEVVPGDILQVEEGTIIPADGRIVTE 215          
BLAST of FC878222 vs. ExPASy Swiss-Prot
Match: PMA1_ZYGRO (Plasma membrane ATPase OS=Zygosaccharomyces rouxii PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 9.330e-40
Identity = 79/157 (50.32%), Postives = 107/157 (68.15%), Query Frame = 1
Query:  256 NSGAATGADPGFVPDEMLEADIKQGISSHEVEQRRKRYGWNEITTEKENLFIKFLGFFTGPVLYVMELAVLLAAGLRDWIDFGVIIGILLLNAVVGWYQEKQAADVVASLKGDIAMKATVVRDGQESDIKARELVPGDIIIIEEGESVPADARLICD 726
            + G A   +   +P+E+L+ D   G+SS EV  RRK+YG N++  E ENL +KFL FF GP+ +VME A +LAAGL DW+DFGVI G+L LNA VG+ QE QA  +V  LK  +A  ATV+RDG   +  A E+VPGDI+ +E+G  +PAD RL+ +
Sbjct:   65 DDGPAAAGEARKIPEELLQTDPSVGLSSDEVVNRRKKYGLNQMREESENLLVKFLMFFIGPIQFVMEAAAVLAAGLEDWVDFGVICGLLFLNAGVGFIQEFQAGSIVEELKKTLANTATVIRDGSVQEAPANEIVPGDILKLEDGTVIPADGRLVTE 221          
BLAST of FC878222 vs. ExPASy Swiss-Prot
Match: PMA1_KLULA (Plasma membrane ATPase OS=Kluyveromyces lactis GN=PMA1 PE=1 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 9.330e-40
Identity = 80/154 (51.95%), Postives = 110/154 (71.43%), Query Frame = 1
Query:  265 AATGADPGFVPDEMLEADIKQGISSHEVEQRRKRYGWNEITTEKENLFIKFLGFFTGPVLYVMELAVLLAAGLRDWIDFGVIIGILLLNAVVGWYQEKQAADVVASLKGDIAMKATVVRDGQESDIKARELVPGDIIIIEEGESVPADARLICD 726
            AA  A P  VP+E+L+ D   G++S EV +RRK+YG N+++ E ENLF+KFL FF GP+ +VME A +LAAGL DW+DFGVI G+L LNA VG+ QE QA  +V  LK  +A  A V+RDG   ++ + E+VPGDI+ +E+G  +PAD RL+ +
Sbjct:   49 AAGSARP--VPEELLQTDPSYGLTSDEVTKRRKKYGLNQMSEETENLFVKFLMFFIGPIQFVMEAAAILAAGLEDWVDFGVICGLLFLNAAVGFIQEYQAGSIVDELKKTLANSAVVIRDGNLVEVPSNEVVPGDILQLEDGVVIPADGRLVTE 200          
BLAST of FC878222 vs. ExPASy Swiss-Prot
Match: PMA1_YEAST (Plasma membrane ATPase 1 OS=Saccharomyces cerevisiae GN=PMA1 PE=1 SV=2)

HSP 1 Score: 161.384 bits (407), Expect = 6.048e-39
Identity = 78/159 (49.06%), Postives = 109/159 (68.55%), Query Frame = 1
Query:  250 SGNSGAATGADPGFVPDEMLEADIKQGISSHEVEQRRKRYGWNEITTEKENLFIKFLGFFTGPVLYVMELAVLLAAGLRDWIDFGVIIGILLLNAVVGWYQEKQAADVVASLKGDIAMKATVVRDGQESDIKARELVPGDIIIIEEGESVPADARLICD 726
            S N G     +   VP+E L+ D   G++S EV +RRK+YG N++  EKE+L +KF+ FF GP+ +VME A +LAAGL DW+DFGVI G+L+LNA VG+ QE QA  +V  LK  +A  A V+RDGQ  +I A E+VPGDI+ +E+G  +P D R++ +
Sbjct:   61 SDNDGPVAAGEARPVPEEYLQTDPSYGLTSDEVLKRRKKYGLNQMADEKESLVVKFVMFFVGPIQFVMEAAAILAAGLSDWVDFGVICGLLMLNAGVGFVQEFQAGSIVDELKKTLANTAVVIRDGQLVEIPANEVVPGDILQLEDGTVIPTDGRIVTE 219          
BLAST of FC878222 vs. ExPASy Swiss-Prot
Match: PMA1_CANAL (Plasma membrane ATPase 1 OS=Candida albicans GN=PMA1 PE=1 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 6.686e-38
Identity = 75/145 (51.72%), Postives = 105/145 (72.41%), Query Frame = 1
Query:  292 VPDEMLEADIKQGISSHEVEQRRKRYGWNEITTEKENLFIKFLGFFTGPVLYVMELAVLLAAGLRDWIDFGVIIGILLLNAVVGWYQEKQAADVVASLKGDIAMKATVVRDGQESDIKARELVPGDIIIIEEGESVPADARLICD 726
            VP+E+L+ D + G++  EV +RRKRYG N++  E+ENL +KF+ FF GP+ +VME A +LAAGL DW+DFGVI  +LLLNA VG+ QE QA  +V  LK  +A  A VVR+GQ  +I A E+VPGDI+ +E+G  +P D R++ +
Sbjct:   52 VPEELLQTDPRVGLTDDEVTKRRKRYGLNQMAEEQENLVLKFVMFFVGPIQFVMEAAAVLAAGLEDWVDFGVICALLLLNAFVGFIQEYQAGSIVDELKKTLANSALVVRNGQLVEIPANEVVPGDILQLEDGTVIPTDGRIVSE 196          
BLAST of FC878222 vs. ExPASy Swiss-Prot
Match: PMA2_YEAST (Plasma membrane ATPase 2 OS=Saccharomyces cerevisiae GN=PMA2 PE=1 SV=3)

HSP 1 Score: 150.984 bits (380), Expect = 8.174e-36
Identity = 74/145 (51.03%), Postives = 101/145 (69.66%), Query Frame = 1
Query:  292 VPDEMLEADIKQGISSHEVEQRRKRYGWNEITTEKENLFIKFLGFFTGPVLYVMELAVLLAAGLRDWIDFGVIIGILLLNAVVGWYQEKQAADVVASLKGDIAMKATVVRDGQESDIKARELVPGDIIIIEEGESVPADARLICD 726
            VP++ L  D   G++S EV +RRK+YG N++  E E+L +KFL FF GP+ +VME A +LAAGL DW+D GVI  +LLLNA VG+ QE QA  +V  LK  +A  ATV+RDGQ  +I A E+VPG+I+ +E G   PAD R++ +
Sbjct:  104 VPEKDLSTDPAYGLTSDEVARRRKKYGLNQMAEENESLIVKFLMFFVGPIQFVMEAAAILAAGLSDWVDVGVICALLLLNASVGFIQEFQAGSIVDELKKTLANTATVIRDGQLIEIPANEVVPGEILQLESGTIAPADGRIVTE 248          
BLAST of FC878222 vs. ExPASy Swiss-Prot
Match: Y1226_METJA (Putative cation-transporting ATPase MJ1226 OS=Methanocaldococcus jannaschii GN=MJ1226 PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.273e-28
Identity = 60/141 (42.55%), Postives = 99/141 (70.21%), Query Frame = 1
Query:  298 DEMLEADIKQGISSHEVEQRRKRYGWNEITTEKENLFIKFLGFFTGPVLYVMELAVLLAAGLRDWIDFGVIIGILLLNAVVGWYQEKQAADVVASLKGDIAMKATVVRDGQESDIKARELVPGDIIIIEEGESVPADARLI 720
            +E  +  IK G+S+ E ++R K YG+NEI  +K +  IKFL +F  P+ +++E+A +L+A ++ W+DF +I+ +LL+N VVG+++E +A +V+  LK  +A+ A V+RDG+   I A+ELVPGD++ I  G+ VPAD  L+
Sbjct:   12 EEEYKTSIKTGLSTEEAKKRLKIYGYNEIPEKKVHPIIKFLSYFWNPIAWMIEIAAILSAIIKHWVDFVIILILLLVNGVVGFWEEYKAENVIEFLKQKMALNARVLRDGKWQIIPAKELVPGDVVRIRIGDIVPADIILV 152          
The following BLAST results are available for this feature:
BLAST of FC878222 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 70
Match NameE-valueIdentityDescription
PMA1_NEUCR2.373e-4356.21Plasma membrane ATPase OS=Neurospora crassa GN=pma... [more]
PMA2_SCHPO8.439e-4154.49Plasma membrane ATPase 2 OS=Schizosaccharomyces po... [more]
PMA1_SCHPO1.880e-4049.68Plasma membrane ATPase 1 OS=Schizosaccharomyces po... [more]
PMA1_AJECA2.455e-4051.61Plasma membrane ATPase OS=Ajellomyces capsulata GN... [more]
PMA1_ZYGRO9.330e-4050.32Plasma membrane ATPase OS=Zygosaccharomyces rouxii... [more]
PMA1_KLULA9.330e-4051.95Plasma membrane ATPase OS=Kluyveromyces lactis GN=... [more]
PMA1_YEAST6.048e-3949.06Plasma membrane ATPase 1 OS=Saccharomyces cerevisi... [more]
PMA1_CANAL6.686e-3851.72Plasma membrane ATPase 1 OS=Candida albicans GN=PM... [more]
PMA2_YEAST8.174e-3651.03Plasma membrane ATPase 2 OS=Saccharomyces cerevisi... [more]
Y1226_METJA6.273e-2842.55Putative cation-transporting ATPase MJ1226 OS=Meth... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA55AC09RM1 IVIA1 Citrus clementina cDNA clone IC0AAA55AC09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878222 ID=FC878222; Name=FC878222; organism=Citrus clementina; type=EST; length=862bp
TCGCTATCTAAGATGGCTGCTCCTCGCGTTAGCTTCGGCGAAAAGGATAT
GGAGAACGGTGGTGATGACGCGGCCGAAAGGTCTCGCAAGTGGTCGCAGG
CTCCTGGCAACATCGAGGACCTCGACGAGTACACTGCTCTGCAGAAGTAC
ATCTCTACCTACAGAGACCCCAAGGCCCACGCCGCCGAGGATGCTGAGGC
CAACGCTGCCGATGCTGGCAAGGGCAAGGCCTGGTGGCAGTTCTGGCGCT
CCGGCAACTCTGGTGCTGCCACTGGTGCCGACCCTGGATTCGTCCCCGAT
GAGATGCTCGAGGCCGATATCAAGCAGGGTATCTCCTCTCACGAGGTTGA
GCAGCGCCGCAAGCGCTACGGTTGGAACGAAATCACCACCGAGAAGGAGA
ACTTGTTCATCAAGTTCCTCGGTTTCTTCACTGGTCCTGTCCTCTATGTT
ATGGAACTCGCTGTCCTCCTCGCCGCCGGTCTTCGTGACTGGATCGACTT
TGGTGTGATTATTGGTATTCTTCTTCTCAACGCCGTCGTCGGTTGGTACC
AGGAAAAGCAGGCTGCCGATGTCGTCGCTTCTCTCAAGGGTGACATCGCC
ATGAAGGCGACTGTCGTCCGTGATGGCCAGGAATCCGACATCAAGGCTCG
CGAGCTCGTCCCCGGTGACATTATCATCATCGAGGAGGGTGAGTCCGTTC
CTGCCGATGCCCGTCTTATCTGCGACTACGATGCTCCCGAGGACTTCGCT
ACCTACAAGGAGCTCCGCGAACAGCACGCTCTCAACCCTGAGGAGGACCC
CGCCGGTTCTGAGGACGCTGAGGACGATNGGTGAGGGTGTTGCCCACCAG
GGTCACTCCATC
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