FC878238
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878238 vs. ExPASy Swiss-Prot
Match: NFYA1_ARATH (Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana GN=NFYA1 PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 4.803e-28 Identity = 91/257 (35.41%), Postives = 121/257 (47.08%), Query Frame = 2 Query: 140 MPAKPD-ENRQLDRGAQSVSQSAIYSQQPWWXXXXXXXXXXXXXXXXXXREQ----PNGSVVNGA-TYSQDG-INGQEHAHLKHIPSSTPLTMGER--LEQNSQM---------------ELVGHSIVLTSYPYTDPQHVGVITPYVPQVMIPPQLYGMHQARXXXXXXXXXXXVYVNAKQYRGILRRRQSRAKAELEKKVIKARKPYLHESRHQHAMRRARGCGGRFLNTKQL---NDNAANSAEKGMNSGADGSK 829 M +KP EN + +V Q +Y++ PWW PNGS N + S+DG +NG+ K ++T + +E N ELVGH I PY DP + G++ Y Q + GM + R VYVNAKQY GILRRR++RAKAELE+KVI+ RKPYLHESRH+HAMRRAR GGRF ++ D E+G + + GS+ Sbjct: 1 MQSKPGRENEEEVNNHHAVQQPMMYAE-PWWKNNSFGVVPQARPSGIPSNSSSLDCPNGSESNDVHSASEDGALNGENDGTWKDSQAATSSRSVDNHGMEGNDPALSIRNMHDQPLVQPPELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYVNAKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAKKSEVEAGEDAGGRDRERGSATNSSGSE 256
BLAST of FC878238 vs. ExPASy Swiss-Prot
Match: NFYA9_ARATH (Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana GN=NFYA9 PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 4.495e-26 Identity = 70/140 (50.00%), Postives = 87/140 (62.14%), Query Frame = 2 Query: 428 ELVGHSIV-LTSYPYTDPQHVGVITPYVPQVMIPPQLYGMHQARXXXXXXXXXXXVYVNAKQYRGILRRRQSRAKAELEKKVIKARKPYLHESRHQHAMRRARGCGGRFLNTKQLNDNAA-NSAEKGMNSGADGSKGSTN 841 +LVGH++ +S PY DP + GV+ Y + GM +R V+VNAKQY+ ILRRRQ+RAKAELEKK+IK+RKPYLHESRHQHAMRR RG GGRF K+ N A+ AE+ N S S+N Sbjct: 113 QLVGHTVGWASSNPYQDPYYAGVMGAYGHHPLGFVPYGGMPHSRMPLPPEMAQEPVFVNAKQYQAILRRRQARAKAELEKKLIKSRKPYLHESRHQHAMRRPRGTGGRF--AKKTNTEASKRKAEEKSNGHVTQSPSSSN 250
BLAST of FC878238 vs. ExPASy Swiss-Prot
Match: NFYA7_ARATH (Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana GN=NFYA7 PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.308e-25 Identity = 64/139 (46.04%), Postives = 85/139 (61.15%), Query Frame = 2 Query: 440 HSIVLTSYPYTDPQHVGVITPYV-PQVMIPPQLYGMHQARXXXXXXXXXXXVYVNAKQYRGILRRRQSRAKAELEKKVIKARKPYLHESRHQHAMRRARGCGGRFLNTKQLNDNAANSA--EKGMNSGADGSKGSTNGT 847 +S+ YPY DP + + P P + QL G+ Q V+VNAKQY GILRRRQSRA+ E + KVIK+RKPYLHESRH HA+RR RGCGGRFLN K+ +++ +S+ EK S + +++GT Sbjct: 51 NSMAPGQYPYPDPYYRSIFAPPPQPYTGVHLQLMGVQQQGVPLPSDAVEEPVFVNAKQYHGILRRRQSRARLESQNKVIKSRKPYLHESRHLHAIRRPRGCGGRFLNAKKEDEHHEDSSHEEKSNLSAGKSAMAASSGT 189
BLAST of FC878238 vs. ExPASy Swiss-Prot
Match: NFYA4_ARATH (Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana GN=NFYA4 PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 3.222e-24 Identity = 72/177 (40.68%), Postives = 95/177 (53.67%), Query Frame = 2 Query: 341 NGQEHAHLKHIPSSTPLTM-----GERLEQNS-QMELVGHSIVLTSYPYTDPQHVGVITP--YVPQVM--IPPQLYGMHQARXXXXXXXXXXXVYVNAKQYRGILRRRQSRAKAELEKKVIKARKPYLHESRHQHAMRRARGCGGRFLNTKQLNDNAANSAEKGMNSGADGSKGSTN 841 N + HA + S T + E ++ NS E + H + YPY DP + V Y+P + QL GM Q V+VNAKQY GILRRRQSRAK E + IKA+KPY+HESRH HA+RR RGCGGRFLN K+ +N + E+ S + S+ S++ Sbjct: 11 NNESHAKKERPDSQTRPQVPSGRSSESIDTNSVYSEPMAHGL----YPYPDPYYRSVFAQQAYLPHPYPGVQLQLMGMQQPGVPLQCDAVEEPVFVNAKQYHGILRRRQSRAKLEARNRAIKAKKPYMHESRHLHAIRRPRGCGGRFLNAKK--ENGDHKEEEEATSDENTSEASSS 181
BLAST of FC878238 vs. ExPASy Swiss-Prot
Match: NFYA3_ARATH (Nuclear transcription factor Y subunit A-3 OS=Arabidopsis thaliana GN=NFYA3 PE=2 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 1.954e-21 Identity = 56/117 (47.86%), Postives = 73/117 (62.39%), Query Frame = 2 Query: 458 SYPYTDPQHVGVITP-YVPQV-MIPPQLYGMHQARXXXXXXXXXXX-VYVNAKQYRGILRRRQSRAKAELEKKVIKARKPYLHESRHQHAMRRARGCGGRFLNTKQLNDNAANSAEK 799 S+ Y DP + G++ Y+PQ PQ+ M R V+VNAKQY I+RRRQ RAK E + K+I+ARKPYLHESRH HA++R RG GGRFLNTK+L + +A + Sbjct: 134 SFHYADPHYGGLLAATYLPQAPTCNPQMVSMIPGRVPLPAELTETDPVFVNAKQYHAIMRRRQQRAKLEAQNKLIRARKPYLHESRHVHALKRPRGSGGRFLNTKKLLQESEQAAAR 250
BLAST of FC878238 vs. ExPASy Swiss-Prot
Match: NFYA2_ARATH (Nuclear transcription factor Y subunit A-2 OS=Arabidopsis thaliana GN=NFYA2 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 5.687e-21 Identity = 59/128 (46.09%), Postives = 79/128 (61.72%), Query Frame = 2 Query: 449 VLTSYPYTDPQHVGVITPYVPQ--VMIPPQLYGMHQARXXXXXXXXXXXVYVNAKQYRGILRRRQSRAKAE--LEKKVI--KARKPYLHESRHQHAMRRARGCGGRFLNTKQLN-DNAANSAEKGMNS 811 + T YPY + Q+ GV++ Y Q VM+P + +YVN+KQY GI+RRRQSRAKA L++K + + RKPY+H SRH HA+RR RG GGRFLNTK N +N+ +A+KG S Sbjct: 101 IYTKYPYGEQQYYGVVSAYGSQSRVMLPLNM------------ETEDSTIYVNSKQYHGIIRRRQSRAKAAAVLDQKKLSSRCRKPYMHHSRHLHALRRPRGSGGRFLNTKSQNLENSGTNAKKGDGS 216
BLAST of FC878238 vs. ExPASy Swiss-Prot
Match: NFYA5_ARATH (Nuclear transcription factor Y subunit A-5 OS=Arabidopsis thaliana GN=NFYA5 PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.267e-20 Identity = 48/91 (52.75%), Postives = 63/91 (69.23%), Query Frame = 2 Query: 590 VYVNAKQYRGILRRRQSRAKAELEKKVIKARKPYLHESRHQHAMRRARGCGGRFLNTKQLNDNAANSAEKGMNSGADGSKGSTNGTGSVDS 862 ++VNAKQY ILRRR+ RAK E + K+IK RKPYLHESRH HA++RARG GGRFLNTK+L +++ + M +G + S G + S Sbjct: 180 IFVNAKQYHAILRRRKHRAKLEAQNKLIKCRKPYLHESRHLHALKRARGSGGRFLNTKKLQESSNSLCSSQMANGQNFSMSPHGGGSGIGS 270
BLAST of FC878238 vs. ExPASy Swiss-Prot
Match: NFYA8_ARATH (Nuclear transcription factor Y subunit A-8 OS=Arabidopsis thaliana GN=NFYA8 PE=2 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 2.161e-20 Identity = 56/110 (50.91%), Postives = 71/110 (64.55%), Query Frame = 2 Query: 458 SYPYTDPQHVGVITP--YVPQVMI-PPQLYGMHQARXXXXXXXXXXXVYVNAKQYRGILRRRQSRAKAELEKKVIKARKPYLHESRHQHAMRRARGCGGRFLNTKQLNDN 778 S+ Y DP H G + P Y+PQ I PQ+ + V+VNAKQ+ I+RRRQ RAK E + K+IKARKPYLHESRH HA++R RG GGRFLNTK+L ++ Sbjct: 132 SFHYADP-HFGGLMPAAYLPQATIWNPQMTRV----PLPFDLIENEPVFVNAKQFHAIMRRRQQRAKLEAQNKLIKARKPYLHESRHVHALKRPRGSGGRFLNTKKLQES 236
BLAST of FC878238 vs. ExPASy Swiss-Prot
Match: NFYA6_ARATH (Nuclear transcription factor Y subunit A-6 OS=Arabidopsis thaliana GN=NFYA6 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.023e-18 Identity = 48/91 (52.75%), Postives = 61/91 (67.03%), Query Frame = 2 Query: 500 PYVPQVMIP-PQLYGMHQARXXXXXXXXXXX-VYVNAKQYRGILRRRQSRAKAELEKKVIKARKPYLHESRHQHAMRRARGCGGRFLNTKQ 766 PY Q + PQ+ G+ +R ++VNAKQY+ ILRRR+ RAK E + K+IK RKPYLHESRH HA++R RG GGRFLNTK+ Sbjct: 141 PYASQHTVQHPQIRGLVPSRMPLPHNIPENEPIFVNAKQYQAILRRRERRAKLEAQNKLIKVRKPYLHESRHLHALKRVRGSGGRFLNTKK 231
BLAST of FC878238 vs. ExPASy Swiss-Prot
Match: NFYAA_ARATH (Nuclear transcription factor Y subunit A-10 OS=Arabidopsis thaliana GN=NFYA10 PE=2 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 2.642e-18 Identity = 57/133 (42.86%), Postives = 79/133 (59.40%), Query Frame = 2 Query: 446 IVLTSYPYTDPQHVGVITPYVPQ-----VMIPPQLYGMHQARXXXXXXXXXXXVYVNAKQYRGILRRRQSRAKAELEKKVIKARKPYLHESRHQHAMRRARGCGGRFLNTKQLNDNAANSAEKGMNSGADGSK 829 ++ T +P+ + Q+ GV++ Y Q VMIP ++ +YVN+KQY GI+RRRQSRAKAE K+ + RKPY+H SRH HAMRR RG GGRFLNTK A++A++ S + S+ Sbjct: 95 MMYTKHPHVE-QYYGVVSAYGSQRSSGRVMIPLKMETEEDGT-----------IYVNSKQYHGIIRRRQSRAKAE---KLSRCRKPYMHHSRHLHAMRRPRGSGGRFLNTK-----TADAAKQSKPSNSQSSE 207 The following BLAST results are available for this feature:
BLAST of FC878238 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878238 ID=FC878238; Name=FC878238; organism=Citrus clementina; type=EST; length=863bpback to top |