FC878354
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878354 vs. ExPASy Swiss-Prot
Match: AGD3_ARATH (ADP-ribosylation factor GTPase-activating protein AGD3 OS=Arabidopsis thaliana GN=AGD3 PE=1 SV=1) HSP 1 Score: 372.089 bits (954), Expect = 2.216e-102 Identity = 191/272 (70.22%), Postives = 208/272 (76.47%), Query Frame = 1 Query: 37 HYHGGVHDEKSAARHTVNLLTSTIKVDADQSDLRFCFRIISPTKNYTLQAESALDQMDWIEKITGVIASLLSSQAPERCLPTSPMXXXXXXXXXXXXXXXXXXXXXXXVEEYTSERNLTSAYHEXXXXXXXXXXXCVKSEKPIDVLRRVCGNDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAFANSVWEELLQSRSAFHVDLTPPSLHKSDKPQLLLMGKPSHSDSISVKEKFIHAKY 852 H HGGVHDEKS ARHTVNLLTSTIKVDADQSDLRFCFRIISPTKNYTLQAESALDQMDWIEKITGVIASLLSSQ PE+ LP SPM EE+ ER+ Y+E K EKPID LR+VCGND+CADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVI+LFQ+LGN FAN+VWEELL SRSA H D P L SDK ++++ GKPS++D IS+KEK+I AKY Sbjct: 363 HGHGGVHDEKSVARHTVNLLTSTIKVDADQSDLRFCFRIISPTKNYTLQAESALDQMDWIEKITGVIASLLSSQVPEQRLPGSPMGSGHHRSASESSSYESSEYDHPTTEEFVCERSFLG-YNERPSRSFQPQRSIRKGEKPIDALRKVCGNDKCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVISLFQALGNTFANTVWEELLHSRSAIHFD---PGLTVSDKSRVMVTGKPSYADMISIKEKYIQAKY 630
BLAST of FC878354 vs. ExPASy Swiss-Prot
Match: AGD1_ARATH (ADP-ribosylation factor GTPase-activating protein AGD1 OS=Arabidopsis thaliana GN=AGD1 PE=2 SV=2) HSP 1 Score: 333.183 bits (853), Expect = 1.141e-90 Identity = 177/274 (64.60%), Postives = 192/274 (70.07%), Query Frame = 1 Query: 37 HYHGGVHDEKSAARHTVNLLTSTIKVDADQSDLRFCFRIISPTKNYTLQAESALDQMDWIEKITGVIASLLSSQAPERCLPTSPMXXXXXXXXXXXXXXXXXXXXXXXVE--EYTSERNLTSAYHEXXXXXXXXXXXCVKSEKPIDVLRRVCGNDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAFANSVWEELLQSRSAFHVDLTPPSLHKSDKPQLLLMGKPSHSDSISVKEKFIHAKY 852 HYHGGVHDEK ARHTVNLLTSTIKVDADQ+DLRFCFRIISPTK YTLQAE+A DQMDWIEKITGVIASLLS Q PER + E E T E +T + VK+EKPIDVL RV GN+RCADCGAPEPDWASLNLGVL+CIECSG+HRNLGVHISKVRSLTLDVKVWEPSV+TLFQSLGN + NSVWEELL S S KSD+P+ LL+ KP +D ISVKE FIHAKY Sbjct: 358 HYHGGVHDEKPVARHTVNLLTSTIKVDADQTDLRFCFRIISPTKVYTLQAENAQDQMDWIEKITGVIASLLSFQTPERAIMRLSTVDGGDTFSASDSGSLADPYDIEQAESGESTVEHPMTGG-NRSRFSGCLQQHDMVKTEKPIDVLTRVLGNERCADCGAPEPDWASLNLGVLICIECSGIHRNLGVHISKVRSLTLDVKVWEPSVLTLFQSLGNVYVNSVWEELLNSESRTSSASRSSGTPKSDRPRKLLVRKPGFNDPISVKELFIHAKY 630
BLAST of FC878354 vs. ExPASy Swiss-Prot
Match: AGD2_ARATH (ADP-ribosylation factor GTPase-activating protein AGD2 OS=Arabidopsis thaliana GN=AGD2 PE=2 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 3.833e-54 Identity = 124/294 (42.18%), Postives = 159/294 (54.08%), Query Frame = 1 Query: 37 HYHGGVHDEKSAA------RHT------------VNLLTSTIKVDADQSDLRFCFRIISPTKNYTLQAESALDQMDWIEKITGVIASLLSS----QAPERCLPTSPMXXXXXXXXXXXXXXXXXXXXXXXVEEYTSERNLTSAYHEXXXXXXXXXXXCVKSEKPIDVLRRVCGNDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAFANSVWEELLQSRSAFHVDLTPPSLHKSDKPQLLLMGKPSHSDSISVKEKFIHAKY 852 HY+ G+ + S RH ++L TS IK+DA+ +DLR CFRIISP K YTLQAE+ D+MDW+ KIT I L+S Q+P R L E+Y N+ + + +LR + GN+ CA+C AP+PDWASLNLGVL+CIECSGVHRNLGVHISKVRSLTLDVKVWEP+++ LF++LGN + NSVWEELL H+D K L + KPS D ++KEK+I+ KY Sbjct: 336 HYYSGLGEHSSGVFGRFRTRHNRSASQGSLDCNMIDLRTSLIKLDAEDTDLRLCFRIISPQKTYTLQAENGADRMDWVNKITAAITIRLNSHFLQQSPARYLDKKNTSSGPATENLTLNQK----------EDYNQRLNV--------------------GDDVLTILREIPGNNTCAECNAPDPDWASLNLGVLMCIECSGVHRNLGVHISKVRSLTLDVKVWEPTILDLFRNLGNGYCNSVWEELLH-----HLD---DDSEKGSTDTLASVSKPSSEDWFTLKEKYINGKY 591
BLAST of FC878354 vs. ExPASy Swiss-Prot
Match: AGD4_ARATH (ADP-ribosylation factor GTPase-activating protein AGD4 OS=Arabidopsis thaliana GN=AGD4 PE=2 SV=2) HSP 1 Score: 205.682 bits (522), Expect = 2.747e-52 Identity = 123/275 (44.73%), Postives = 153/275 (55.64%), Query Frame = 1 Query: 37 HYHGGVHDEKSAARHTVNLLTSTIKVDADQSDLRFCFRIISPTKNYTLQAESALDQMDWIEKITGVIASLLSSQAPERCLPTSPMXXXXXXXXXXXXXXXXXXXXXXXVEEYTSERNLTSAYHEXXXXXXXXXXXCVKSEKPIDV---LRRVCGNDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAFANSVWEELLQSRSAFHVDLTPPSLHKSDKPQLLLMGKPSHSDSISVKEKFIHAKY 852 H G E S +T++L TS IK+DA+ DLR CFRIISP K YTLQAE+ D+MDW+ KIT I +LL+S L SP+ Y + N +SA + DV LR + GN+ CA+C APEPDWASLNLGVL+CI+CSGVHRNLGVHISKVRSL+LDVKVWEP+++ LF++LGN + NS+WE LL H+D + KP DS SVKEK+I KY Sbjct: 354 HNRSGSLTEGSLGYNTIDLRTSLIKLDAEDMDLRLCFRIISPQKTYTLQAENGADRMDWVNKITKAIGTLLNSHF----LQQSPV-------------------------RYLDKDNSSSAPANAVVSGDQIRHNDSRQNIGDDVSTILRGLPGNNACAECNAPEPDWASLNLGVLLCIQCSGVHRNLGVHISKVRSLSLDVKVWEPTILDLFRNLGNVYCNSLWEGLL------HLD---DDCEDGSALSHASVSKPCPEDSFSVKEKYILGKY 590
BLAST of FC878354 vs. ExPASy Swiss-Prot
Match: ACAP3_HUMAN (Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3 OS=Homo sapiens GN=ACAP3 PE=2 SV=2) HSP 1 Score: 124.02 bits (310), Expect = 1.051e-27 Identity = 71/190 (37.37%), Postives = 98/190 (51.58%), Query Frame = 1 Query: 136 RFCFRIISPTKNYTLQAESALDQMDWIEKITGVIASLLSSQAPERCLPTSPMXXXXXXXXXXXXXXXXXXXXXXXVEEYTSERNLTSAYHEXXXXXXXXXXXCVKSEKPIDVLRRVCGNDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAFANSVWE 705 RFCF ++SPTK+ LQA+S + W++ + IAS ++P+ C TS + + E VK E + ++ V GN +C DCG P+P WAS+NLGVL+CIECSG+HR+LGVH SKVRSLTLD WEP ++ L LGN+ N ++E Sbjct: 329 RFCFEVLSPTKSCMLQADSEKLRQAWVQAVQASIASAYR-ESPDSCYSER---------------------LDRTASPSTSSIDSATDTRERG----------VKGESVLQRVQSVAGNSQCGDCGQPDPRWASINLGVLLCIECSGIHRSLGVHCSKVRSLTLD--SWEPELLKLMCELGNSAVNQIYE 484
BLAST of FC878354 vs. ExPASy Swiss-Prot
Match: ACAP1_MOUSE (Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 1 OS=Mus musculus GN=Acap1 PE=1 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.678e-25 Identity = 83/261 (31.80%), Postives = 115/261 (44.06%), Query Frame = 1 Query: 88 NLLTSTIKVDADQSDLRFCFRIISPTKNYTLQAESALDQMDWIEKITGVIASLLSSQAPERCLPTSPMXXXXXXXXXXXXXXXXXXXXXXXVEEYTSERNLTSAYHEXXXXXXXXXXXCVKSEKPIDV------LRRVCGNDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAFANSVWEELLQSRSAFHVDLTPPSLHKSDKPQLLLMGKPSHSDSISVKEKFIHAKY 852 +L T+K+ D S+ RFCF ++S +K+ LQA+S W+ + IAS S QA P P S YH + + V ++ V GN +C DC P P+WAS+NLGV +CI+CSG+HR+LGVH SKVRSLTLD WEP ++ L LGN N ++E +++ + + KP S S KE +IHAKY Sbjct: 311 DLRLCTVKLCPD-SERRFCFEVVSTSKSCFLQADSERLLQLWVSAVQSSIASAFS-QAHLENSPRGP--------------------------------GQVSGYHAPGSAATLACGGAARGRESGGVGQVAAQVQSVDGNAQCCDCREPAPEWASINLGVTLCIQCSGIHRSLGVHFSKVRSLTLD--SWEPELVKLMCELGNVIINQIYEARVEA---------------------MAVKKPGPSCSRQEKEAWIHAKY 514
BLAST of FC878354 vs. ExPASy Swiss-Prot
Match: ACAP2_CHICK (Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 OS=Gallus gallus GN=ACAP2 PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 3.165e-24 Identity = 75/255 (29.41%), Postives = 109/255 (42.75%), Query Frame = 1 Query: 88 NLLTSTIKVDADQSDLRFCFRIISPTKNYTLQAESALDQMDWIEKITGVIASLLSSQAPERCLPTSPMXXXXXXXXXXXXXXXXXXXXXXXVEEYTSERNLTSAYHEXXXXXXXXXXXCVKSEKPIDVLRRVCGNDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAFANSVWEELLQSRSAFHVDLTPPSLHKSDKPQLLLMGKPSHSDSISVKEKFIHAKY 852 +L T+K + + RFCF ++SPTK+ LQA+S + WI+ + IA+ + +E + +S +K E + ++ + GN C DCG +P WAS+NLG+ +CIECSG+HR+LGVH SKVRSLTLD WEP ++ L LGN N ++E L+ + KP KE +I AKY Sbjct: 312 DLRLCTVK-HCEDIERRFCFEVVSPTKSCMLQADSEKLRQAWIKAVQTSIATAYREKG----------------------------------DESEKQEKKSSPSTGSLESGSETKEKLLKGESALQRVQCIPGNAACCDCGLADPRWASINLGITLCIECSGIHRSLGVHFSKVRSLTLD--SWEPELLKLMCELGNDVINRIYEAKLEKMG---------------------VKKPQPGSQRQEKEMYIKAKY 508
BLAST of FC878354 vs. ExPASy Swiss-Prot
Match: ACAP2_RAT (Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 OS=Rattus norvegicus GN=Acap2 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 4.134e-24 Identity = 70/210 (33.33%), Postives = 100/210 (47.62%), Query Frame = 1 Query: 88 NLLTSTIKVDADQSDLRFCFRIISPTKNYTLQAESALDQMDWIEKITGVIASLLSSQAPERCLPTSPMXXXXXXXXXXXXXXXXXXXXXXXVEEYTSERNLTSAYHEXXXXXXXXXXXCVKSEKPIDVLRRVCGNDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAFANSVWEELLQ 717 +L T+K + + RFCF ++SPTK+ LQA+S + WI+ + IA+ + E + S +L S +K E + ++ + GN C DCG +P WAS+NLG+ +CIECSG+HR+LGVH SKVRSLTLD WEP ++ L LGN N V+E L+ Sbjct: 312 DLRLCTVK-HCEDIERRFCFEVVSPTKSCMLQADSEKLRQAWIKAVQTSIATAYREKGDES--------------------------EKLDKKSSPSTGSLDSGSESKEKL--------LKGESALQRVQCIPGNTSCCDCGLADPRWASINLGITLCIECSGIHRSLGVHFSKVRSLTLD--TWEPELLKLMCELGNDVINRVYEAKLE 484
BLAST of FC878354 vs. ExPASy Swiss-Prot
Match: ACAP2_MOUSE (Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 OS=Mus musculus GN=Acap2 PE=1 SV=2) HSP 1 Score: 112.079 bits (279), Expect = 4.134e-24 Identity = 70/210 (33.33%), Postives = 100/210 (47.62%), Query Frame = 1 Query: 88 NLLTSTIKVDADQSDLRFCFRIISPTKNYTLQAESALDQMDWIEKITGVIASLLSSQAPERCLPTSPMXXXXXXXXXXXXXXXXXXXXXXXVEEYTSERNLTSAYHEXXXXXXXXXXXCVKSEKPIDVLRRVCGNDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAFANSVWEELLQ 717 +L T+K + + RFCF ++SPTK+ LQA+S + WI+ + IA+ + E + S +L S +K E + ++ + GN C DCG +P WAS+NLG+ +CIECSG+HR+LGVH SKVRSLTLD WEP ++ L LGN N V+E L+ Sbjct: 312 DLRLCTVK-HCEDIERRFCFEVVSPTKSCMLQADSEKLRQAWIKAVQTSIATAYREKGDES--------------------------EKLDKKSSPSTGSLDSGNESKEKL--------LKGESALQRVQCIPGNTSCCDCGLADPRWASINLGITLCIECSGIHRSLGVHFSKVRSLTLD--TWEPELLKLMCELGNDVINRVYEAKLE 484
BLAST of FC878354 vs. ExPASy Swiss-Prot
Match: ACAP2_RABIT (Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 OS=Oryctolagus cuniculus GN=ACAP2 PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 9.209e-24 Identity = 70/206 (33.98%), Postives = 98/206 (47.57%), Query Frame = 1 Query: 88 NLLTSTIKVDADQSDLRFCFRIISPTKNYTLQAESALDQMDWIEKITGVIASLLSSQAPERCLPTSPMXXXXXXXXXXXXXXXXXXXXXXXVEEYTSERNLTSAYHEXXXXXXXXXXXCVKSEKPIDVLRRVCGNDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNAFANSVWE 705 +L T+K + + RFCF ++SPTK+ LQA+S + WI+ + IA+ + E + S +L S +K E + ++ V GN C DCG +P WAS+NLG+ +CIECSG+HR+LGVH SKVRSLTLD WEP ++ L LGN N V+E Sbjct: 312 DLRLCTVK-HCEDIERRFCFEVVSPTKSCMLQADSEKLRQAWIKAVQTSIATAYREKGDES--------------------------EKLDKKSSPSTGSLDSGNESKEKL--------LKGESALQRVQCVPGNASCCDCGLADPRWASINLGITLCIECSGIHRSLGVHFSKVRSLTLD--TWEPELLKLMCELGNDVINRVYE 480 The following BLAST results are available for this feature:
BLAST of FC878354 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 92
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878354 ID=FC878354; Name=FC878354; organism=Citrus clementina; type=EST; length=852bpback to top |