FC878401
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878401 vs. ExPASy Swiss-Prot
Match: PME68_ARATH (Probable pectinesterase 68 OS=Arabidopsis thaliana GN=PME68 PE=2 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 5.471e-43 Identity = 86/143 (60.14%), Postives = 103/143 (72.03%), Query Frame = 2 Query: 131 FLSLALFQVTISATAQAANSTK-------HHHMWIGPVGHRVITVDVNGSGEFKSVQAAVDSVPERNRMNVLIQISAGCYIEKVTVPVSKPYITFQGAGRDRTVIEWHDRACDRGANGQQLRTYQTASVTVFANYFSARNISF 538 F+S S A +NST HH W+GP GH+VITV +NG +F+SVQ AVDS+P+ N ++ I+I+ G Y EKV VP +KPYITF+GAGRD T IEWHDRA D GANGQQLRTYQTASVTV+ANYF+ARNISF Sbjct: 19 FVSFHCLCFRFSLVAACSNSTDDQQIQHHHHRKWVGPSGHKVITVSLNGHAQFRSVQDAVDSIPKNNNKSITIKIAPGFYREKVVVPATKPYITFKGAGRDVTAIEWHDRASDLGANGQQLRTYQTASVTVYANYFTARNISF 161 HSP 2 Score: 114.005 bits (284), Expect = 1.153e-24 Identity = 51/57 (89.47%), Postives = 53/57 (92.98%), Query Frame = 1 Query: 712 VMFT*NTAPAPLPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAXRHYFKECY 882 + FT NTAPAPLPGMQGWQA AFRISGDKA+FSGCGFYGAQDTLCDDA RHYFKECY Sbjct: 159 ISFT-NTAPAPLPGMQGWQAVAFRISGDKAFFSGCGFYGAQDTLCDDAGRHYFKECY 214
BLAST of FC878401 vs. ExPASy Swiss-Prot
Match: PME62_ARATH (Pectinesterase QRT1 OS=Arabidopsis thaliana GN=QRT1 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.450e-19 Identity = 53/106 (50.00%), Postives = 70/106 (66.04%), Query Frame = 2 Query: 230 RVITVDVNGSGEFKSVQAAVDSVPERNRMNVLIQISAGCYIEKVTVPVSKPYITFQG--AGRDRTVIEWHDRACDRGANGQQLRTYQTASVTVFANYFSARNISFK 541 RVI VD NG G+ +VQ AVD VP+ N V I I G Y EKV VP SKPYI+F G + TVI W D+A D G +G++L TY+TASV++ +++F A I+F+ Sbjct: 80 RVIVVDKNGGGDSVTVQGAVDMVPDSNSQRVKIFILPGIYREKVIVPKSKPYISFIGNESYAGDTVISWSDKASDLGCDGKELGTYRTASVSIESDFFCATAITFE 185
BLAST of FC878401 vs. ExPASy Swiss-Prot
Match: PME53_ARATH (Probable pectinesterase 53 OS=Arabidopsis thaliana GN=PME53 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.830e-15 Identity = 38/97 (39.18%), Postives = 62/97 (63.92%), Query Frame = 2 Query: 251 NGSGEFKSVQAAVDSVPERNRMNVLIQISAGCYIEKVTVPVSKPYITFQGAGRDRTVIEWHDRACDRGANGQQLRTYQTASVTVFANYFSARNISFK 541 + G+F +Q A+DS+P N + V+I++ AG Y EKV++P K +IT +G G ++T +EW D A + G + TY +AS V + +F A+NI+F+ Sbjct: 91 SNKGDFTKIQDAIDSLPLINFVRVVIKVHAGVYKEKVSIPPLKAFITIEGEGAEKTTVEWGDTAQTPDSKGNPMGTYNSASFAVNSPFFVAKNITFR 187 HSP 2 Score: 69.3218 bits (168), Expect = 3.256e-11 Identity = 31/52 (59.62%), Postives = 34/52 (65.38%), Query Frame = 1 Query: 727 NTAPAPLPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAXRHYFKECY 882 NT P PLPG G QA A R+S D A F GC GAQDTL D RHY+K+CY Sbjct: 188 NTTPVPLPGAVGKQAVALRVSADNAAFFGCRMLGAQDTLYDHLGRHYYKDCY 239
BLAST of FC878401 vs. ExPASy Swiss-Prot
Match: PME15_ARATH (Probable pectinesterase 15 OS=Arabidopsis thaliana GN=PME15 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.826e-15 Identity = 50/127 (39.37%), Postives = 68/127 (53.54%), Query Frame = 2 Query: 197 HHH-------MWIGPVGHR-----VITVDVNGSGEFKSVQAAVDSVPERNRMNVLIQISAGCYIEKVTVPVSKPYITFQGAGRDRTVIEWHDRACDRGANGQQLRTYQTASVTVFANYFSARNISFK 541 HHH W + H+ V+TVD++G G F +VQ+A+D VP+ + LI +++G Y EKVTV +K + QG G T IEW+D A G T + S VFA F+A NISFK Sbjct: 66 HHHEPIKCCEKWTSRLRHQYKTSLVLTVDLHGCGNFSNVQSAIDVVPDLSSSKTLIIVNSGSYREKVTVNENKTNLVIQGRGYQNTSIEWNDTAKSAG------NTADSFSFVVFAANFTAYNISFK 186 HSP 2 Score: 75.0998 bits (183), Expect = 5.933e-13 Identity = 34/52 (65.38%), Postives = 37/52 (71.15%), Query Frame = 1 Query: 727 NTAPAPLPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAXRHYFKECY 882 N AP P PG QA A RI GD+A F GCGFYGAQDTL DD RH+FKEC+ Sbjct: 187 NNAPEPDPGEADAQAVALRIEGDQAAFYGCGFYGAQDTLLDDKGRHFFKECF 238
BLAST of FC878401 vs. ExPASy Swiss-Prot
Match: PME8_ARATH (Probable pectinesterase 8 OS=Arabidopsis thaliana GN=PME8 PE=2 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 5.336e-14 Identity = 46/101 (45.54%), Postives = 62/101 (61.39%), Query Frame = 2 Query: 236 ITVDVNGSGEFKSVQAAVDSVPERNRMNVLIQISAGCYIEKVTVPVSKPYITFQGAGRDRTVIEWHDRACDRGANGQQLRTYQTASVTVFANYFSARNISF 538 + VD NG F +VQ+AVD+V ++ +I I++G Y EKV +P +KP IT QG G D T I W+D A ANG T+ A+V VF + F A+NISF Sbjct: 91 LCVDKNGCCNFTTVQSAVDAVGNFSQRRNVIWINSGMYYEKVVIPKTKPNITLQGQGFDITAIAWNDTA--YSANG----TFYCATVQVFGSQFVAKNISF 185 HSP 2 Score: 76.6406 bits (187), Expect = 2.039e-13 Identity = 34/52 (65.38%), Postives = 39/52 (75.00%), Query Frame = 1 Query: 727 NTAPAPLPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAXRHYFKECY 882 N AP P PG G QA A RI+GD++ F GCGF+GAQDTL DD RHYFK+CY Sbjct: 187 NVAPIPKPGDVGAQAVAIRIAGDESAFVGCGFFGAQDTLHDDRGRHYFKDCY 238
BLAST of FC878401 vs. ExPASy Swiss-Prot
Match: PME49_ARATH (Probable pectinesterase 49 OS=Arabidopsis thaliana GN=PME49 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.322e-12 Identity = 34/52 (65.38%), Postives = 37/52 (71.15%), Query Frame = 1 Query: 727 NTAPAPLPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAXRHYFKECY 882 NT+P P PG QG QA A RI+GDKA F C FYG QDTLCDD H+FK CY Sbjct: 162 NTSPMPKPGTQG-QALAMRINGDKAAFYNCRFYGFQDTLCDDRGNHFFKNCY 212 HSP 2 Score: 70.0922 bits (170), Expect = 1.898e-11 Identity = 38/102 (37.25%), Postives = 60/102 (58.82%), Query Frame = 2 Query: 230 RVITVDVNGSGEFKSVQAAVDSVPERNRMNVLIQISAGCYIEKVTVPVSKPYITFQGAGRDRTVIEWHDRACDRGANGQQLRTYQTASVTVFANYFSARNIS 535 RVI V+ NG G+FK++ AA+ S+P N+ V+I+++ G Y EKVTV V +PY+T G T + + A G T ++A++ V+A F A N++ Sbjct: 65 RVIIVNQNGGGDFKTINAAIKSIPLANKNRVIIKLAPGIYHEKVTVDVGRPYVTLLGKPGAETNLTYAGTAAKYG-------TVESATLIVWATNFLAANLN 159
BLAST of FC878401 vs. ExPASy Swiss-Prot
Match: PME14_ARATH (Putative pectinesterase 14 OS=Arabidopsis thaliana GN=PME14 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.945e-12 Identity = 42/96 (43.75%), Postives = 53/96 (55.21%), Query Frame = 1 Query: 595 GVSIVNYSIKMY*LTATMHGMSHFFSAKLNCNKLKVEHMVMFT*NTAPAPLPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAXRHYFKECY 882 G+ SI+ TA+ +G FS + K + + F NTAPAP PG QA A ++ GDKA F GCGFYG QDTL D RH+FK C+ Sbjct: 96 GMGYSRTSIEWNNTTASSNGTFSSFSVAVFGEKFTA-YNISFK-NTAPAPNPGAVDAQAVALKVVGDKAAFYGCGFYGNQDTLLDQEGRHFFKGCF 189
BLAST of FC878401 vs. ExPASy Swiss-Prot
Match: PME50_ARATH (Probable pectinesterase 50 OS=Arabidopsis thaliana GN=PME50 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.824e-12 Identity = 35/104 (33.65%), Postives = 62/104 (59.62%), Query Frame = 2 Query: 230 RVITVDVNGSGEFKSVQAAVDSVPERNRMNVLIQISAGCYIEKVTVPVSKPYITFQGAGRDRTVIEWHDRACDRGANGQQLRTYQTASVTVFANYFSARNISFK 541 ++ITV+ G FK++ A+ S+P N+ V+I+++ G Y EKVT+ +++P+IT G TV+ +H A G T ++A++ V+A YF A +++ K Sbjct: 65 QIITVNQKGGANFKTLNEAIKSIPTGNKNRVIIKLAPGVYNEKVTIDIARPFITLLGQPGAETVLTYHGTAAQYG-------TVESATLIVWAEYFQAAHLTIK 161 HSP 2 Score: 71.633 bits (174), Expect = 6.560e-12 Identity = 33/52 (63.46%), Postives = 37/52 (71.15%), Query Frame = 1 Query: 727 NTAPAPLPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAXRHYFKECY 882 NTAP P PG QG QA A RI+ DKA F C F+G QDTLCDD H+FK+CY Sbjct: 162 NTAPMPKPGSQG-QALAMRINADKAAFYSCRFHGFQDTLCDDKGNHFFKDCY 212
BLAST of FC878401 vs. ExPASy Swiss-Prot
Match: PME67_ARATH (Probable pectinesterase 67 OS=Arabidopsis thaliana GN=PME67 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.228e-11 Identity = 38/105 (36.19%), Postives = 60/105 (57.14%), Query Frame = 2 Query: 227 HRVITVDVNGSGEFKSVQAAVDSVPERNRMNVLIQISAGCYIEKVTVPVSKPYITFQGAGRDRTVIEWHDRACDRGANGQQLRTYQTASVTVFANYFSARNISFK 541 +R I VD+ G G++ SVQ A+D+VP N +++ + G Y E+V +P +KP+I +G G+ +TVIE + D A +A+ V AN+F A IS + Sbjct: 43 NRSIIVDIEGKGDYTSVQKAIDAVPVGNSNWIIVHVRKGIYKERVHIPENKPFIFMRGNGKGKTVIESSQSSVDNVA---------SATFKVEANHFVAFGISIR 138
BLAST of FC878401 vs. ExPASy Swiss-Prot
Match: PME55_ARATH (Probable pectinesterase 55 OS=Arabidopsis thaliana GN=PME55 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.522e-11 Identity = 31/69 (44.93%), Postives = 42/69 (60.87%), Query Frame = 2 Query: 236 ITVDVNGSGEFKSVQAAVDSVPERNRMNVLIQISAGCYIEKVTVPVSKPYITFQGAGRDRTVIEWHDRA 442 + VD +G G F ++Q A+DSVP N I + AG Y EK+T+P KP+I GAG+ T +EW D A Sbjct: 29 VIVDQSGHGNFTTIQKAIDSVPINNTHWFFINVKAGLYREKITIPQKKPFIVIVGAGKRSTRVEWDDHA 97 The following BLAST results are available for this feature:
BLAST of FC878401 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878401 ID=FC878401; Name=FC878401; organism=Citrus clementina; type=EST; length=882bpback to top |