FC878469
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878469 vs. ExPASy Swiss-Prot
Match: Y5957_ARATH (Uncharacterized protein At5g39570 OS=Arabidopsis thaliana GN=At5g39570 PE=1 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 2.231e-47 Identity = 130/287 (45.30%), Postives = 151/287 (52.61%), Query Frame = 1 Query: 109 ITLTYGRPLPPSDETCYPSSSASDGDFDYARPKFSSHSEPSAYADEALNNEYSSYARPKXXXXXXXXXXXXXXXXXXXXXXXAYGFQPGMGRPEPYGSGRPESEYASG--------YAKRPDSQEYGSGYGKRPESE-EYGSGYGRKPDSEVHGSGYGRRPESG-ESGFGGRTESEYGGS-AYGRKPEYESGYGQKPEYESGYGGKPGY-ESGYGSKPEFESGYGRKPEY------------ESGYGSKPEFESGYGRKPEYESGYGSKHDDGVGYGSKPHESGYGR 897 IT+ YGRP+PPSDETCYP SS D DF+Y RP+F+ EPSAY DEALN EYSSY+RPK YG + G GR +PESEY SG Y +RP+ Q YGSGYG R E+E EYGSG G + + E YGRRPESG SG+GGR+ESEY +YGR E E GY +KP Y + GY + YG E E GY RKP Y + YG E E G RKP Y + DD V KP YGR Sbjct: 28 ITVIYGRPIPPSDETCYPLSSGVDDDFEYERPEFTQIHEPSAYGDEALNTEYSSYSRPK-PRPAFRPDSGGGGHVQGERPNPGYGSESGYGR-------KPESEYGSGYGGQTEVEYGRRPE-QSYGSGYGGRTETESEYGSGGGGRTEVE-----YGRRPESGLGSGYGGRSESEYERKPSYGRSEEQEEGY-RKPSYGRSEEQEEGYRKPSYGRSEEQEEGY-RKPSYGRSEEEQEEGYRKPSYGRSEEQEEGSYRKPSY-----GRSDDQVESYIKP---SYGR 290
BLAST of FC878469 vs. ExPASy Swiss-Prot
Match: IF2_CLOPH (Translation initiation factor IF-2 OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=infB PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.194e-16 Identity = 55/187 (29.41%), Postives = 88/187 (47.06%), Query Frame = 1 Query: 394 YGSGRPESEYASGYAKRPDSQEYGSGYGKRPESEEYGSGYGRKPDSEVHGSGYGRRPESGESGFGGRTESEYGGSAYGRKPEYESGYGQKPEYESGYGG-KPGYESGYGS-KPEFESGYG-----------RKPEYESGYGSKPEFESGYGRKPEYESGYGSKHDDGVGYG------SKPHESGYGR 897 YG RP+ + Y RP Q YG RP+ + GS R+P + YG R G+ +G R + + GS R+P+ + YG +P+ + YG +PG + YG +P+ + YG R+P+ + GYG +P+ + YG +P+ + GY + +G K +SGY R Sbjct: 288 YGDRRPQGQ--GSYGDRPQGQ---GSYGDRPQGQ--GSYGDRRPQGQ---GSYGDRRPQGQGSYGDRPQGQ--GSYGDRRPQGQGSYGDRPQGQGNYGDRRPGGQGSYGDRRPQGQGSYGDRPQGQGNFGDRRPQGQGGYGGRPQGQGSYGGRPQGQGGYAGRSQGQGSFGGFNKDFDKDKDSGYTR 462 HSP 2 Score: 72.0182 bits (175), Expect = 5.192e-12 Identity = 49/167 (29.34%), Postives = 81/167 (48.50%), Query Frame = 1 Query: 355 AYGFQP-GMGRPEPYGSGRPESEYASGYAKRPDSQEYGSGYGKRPESE-EYGS-------GYGRKPDSEVHGSGYGRRPESGESGFGGRTESEYGGSAYGRKPEYESGYG-QKPEYESGYGGKPGYESGYGSKPEFESGYGRKPEYESGYGS-----KPEFESGYGR 810 +YG +P G G YG RP+ + + G +RP Q YG RP+ + YG YG +P + YG R G+ +G R G +YG +P+ + +G ++P+ + GYGG+P + YG +P+ + GY + + + +G + +SGY R Sbjct: 308 SYGDRPQGQGS---YGDRRPQGQGSYG-DRRPQGQ---GSYGDRPQGQGSYGDRRPQGQGSYGDRPQGQ---GNYGDRRPGGQGSYGDRRPQ--GQGSYGDRPQGQGNFGDRRPQGQGGYGGRPQGQGSYGGRPQGQGGYAGRSQGQGSFGGFNKDFDKDKDSGYTR 462 HSP 3 Score: 68.9366 bits (167), Expect = 4.395e-11 Identity = 52/192 (27.08%), Postives = 81/192 (42.19%), Query Frame = 1 Query: 379 GRPEPYGSGRPESEYASGY----AKRPDSQEYGSGYGKRPESEEYGSGYGRKPDSEVHGSGYG-RRPESGESGFGGRTESEYGGSAYGRKPEYESGYGQKPEYESGYGGKPGYESGYGSK-PEFESGYG-RKPEYESGYGSKPEFESGYGRKPEYESGYGSKHDDGVG------------YGSKPHESG-YG 894 G PY RP+ + + RP Q G +RP + + G G D G G RRP +G+ G + YG R+P+ + YG + G +P + YG + P+ + YG R+P+ + YG +P+ + YG +P+ + YG + G G YG +P G YG Sbjct: 174 GDRRPYNGDRPQGQNSGDRRPYNGDRPQGQNSGD---RRPYNGDRPQGQGNYGDRRPQGQNSGDRRPYNGDRPQG---QGNYGD----RRPQGQGSYGDR---RPNSGDRPQGQGNYGDRRPQGQGSYGDRRPQGQGSYGDRPQGQGSYGDRPQGQGSYGDRRPQGQGSYGDRRPQGQGSYGDRPQGQGSYG 352
BLAST of FC878469 vs. ExPASy Swiss-Prot
Match: HORN_HUMAN (Hornerin OS=Homo sapiens GN=HRNR PE=1 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 3.975e-12 Identity = 58/179 (32.40%), Postives = 81/179 (45.25%), Query Frame = 1 Query: 379 GRPEPYGSGRPESEYASGYAKRPDSQEYGSGYGKRPESEEYGSGYGRKPDSEVHGSGYGRRPESGESGFGGRTESEYG--GSAYGRKPEYESGYGQKPEYESGYGGKPGYESGYGSKPEFESGYGRKPEYESGYGSKPEFESGYGRK--PEYESGYGSKHDDGVGYGSK--PHESGYGR 897 G+ +G S +SGY ++ GSG G+ P + GSG + P HGSG GR SG+ G G S +G S+ G+ Y S +G + SGY G+ G SG S+ E R +GS SG+GR+ +S +H G+G+ S H SG GR Sbjct: 1567 GQSSSHGQHGSGSSQSSGYGRQ------GSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGSGLGESSGFGHHESSSGQSSSY-SQHGSGSGHSSGY-GQHGSRSGQSSRGERHGSSSRSSSRYGQHGSGSRQSSGHGRQGSGSGQSPSRGRHGSGLGHSSSHGQHGSGSGR 1737 HSP 2 Score: 71.2478 bits (173), Expect = 8.856e-12 Identity = 59/182 (32.42%), Postives = 82/182 (45.05%), Query Frame = 1 Query: 379 GRPEPYGSGRPESEYASGYAKRPDSQEYGSGYGKRPESEEYGSGYGRKPDSEVHGSGYGRRPESGESGFGGRTESEYG--GSAYGRKPEYESGYGQKPEYESGYGGKPGYESGYGSKPEFESGYGRKPEYESGYGSKPEFESGYGRKPEYESGYG-----SKHDDGVGYGSK--PHESGYGR 897 G+ +G S +SGY ++ GSG G+ P + GSG + P HGSG GR SG+ G G S +G S+ G+ Y S +G + SGY G+ G SG S+ E + +GS SG+GR+ SG G +H G+G+ S H SG GR Sbjct: 1097 GQSSSHGQHGSGSSQSSGYGRQ------GSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGSGLGESSGFGHHESSSGQSSSY-SQHGSGSGHSSGY-GQHGSRSGQSSRGERHGSSSGSSSHYGQHGSGSRQSSGHGRQ---GSGSGHSPSRGRHGSGLGHSSSHGQHGSGSGR 1267 HSP 3 Score: 71.2478 bits (173), Expect = 8.856e-12 Identity = 57/179 (31.84%), Postives = 81/179 (45.25%), Query Frame = 1 Query: 379 GRPEPYGSGRPESEYASGYAKRPDSQEYGSGYGKRPESEEYGSGYGRKPDSEVHGSGYGRRPESGESGFGGRTESEYG--GSAYGRKPEYESGYGQKPEYESGYGGKPGYESGYGSKPEFESGYGRKPEYESGYGSKPEFESGYGRK--PEYESGYGSKHDDGVGYGSK--PHESGYGR 897 G+ +G S +SGY ++ GSG G+ P + GSG + P HGSG GR SG+ G G S +G S+ G+ Y S +G + SGY G+ G SG S+ E + +GS SG+GR+ +S +H G+G+ S H SG GR Sbjct: 2507 GQSSSHGQHGSGSSQSSGYGRQ------GSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGSGLGESSGFGHHESSSGQSSSY-SQHGSGSGHSSGY-GQHGSRSGQSSRGERHGSSSGSSSHYGQHGSGSRQSSGHGRQGSGSGQSPSRGRHGSGLGHSSSHGQHGSGSGR 2677 HSP 4 Score: 69.707 bits (169), Expect = 2.577e-11 Identity = 61/186 (32.80%), Postives = 80/186 (43.01%), Query Frame = 1 Query: 379 GRPEPYGSGRPESEYASGYAKRPDSQEYGSGYGKRPESEEYGSGYGRKPDSEVHGSGYGRRPESGESGFGGRTESEYG-GSAYGRKPEYE---SGYGQKPEYESGYGGKPGYES---GYGSKPEFESGYGRKPEYESGYGSKP-----EFESGYGRKPEYESGYGSKHDDGVGYGSK--PHESGYG 894 G+ YG S +ASG + +GSG G+ P + GSG G+ P HGSG GR SG G G S +G S+ G+ Y SG G YE +G + G S +GS S YG + G GS+ + SG G+ P G +H G G S P+ SG G Sbjct: 862 GQSSSYGQHESASHHASGRGR------HGSGSGQSPGHGQRGSGSGQSPSYGRHGSGSGRSSSSGRHGSGSGQSSGFGHKSSSGQSSGYTQHGSGSGHSSSYEQ-HGSRSGQSSRSEQHGSSSGSSSSYG-----QHGSGSRQSLGHGQHGSGSGQSPSPSRG---RHGSGSGQSSSYGPYRSGSG 1032 HSP 5 Score: 69.3218 bits (168), Expect = 3.365e-11 Identity = 64/198 (32.32%), Postives = 83/198 (41.92%), Query Frame = 1 Query: 367 QPGMGRPEPYGSGRPESE--YASGYAKRPDSQEYGSGYGKRPESEEYGSGYGRKPDSEVHGSGYGRRPESGESGFGGRTESEYGGSAYGRKPEYESGYGQKPEYESGYGGKPGY---ESGYGSKP---EFESGYGRKPE---YESGYGSKPEFESGYGR---KPEYESGY-----GSKHDDGVG-YGSKPHESGYGRK 900 Q G G Y G ES SG+ + SGY K +GSG G HGS G+ SG+ G R S YG + + SG GQ + SG G PG+ SG G P + +G+GR Y SG G + SG+G E+ SGY GS H G G +GS+ +S G + Sbjct: 324 QHGSGSSYSYSRGHYESGSGQTSGFGQHESGSGQSSGYSK------HGSGSGHSSSQGQHGSTSGQASSSGQHGSSSRQSSSYG--QHESASRHSSGRGQ---HSSGSGQSPGHGQRGSGSGQSPSSGQHGTGFGRSSSSGPYVSGSG----YSSGFGHHESSSEHSSGYTQHGSGSGHSSGHGQHGSRSGQSSRGER 506 HSP 6 Score: 67.781 bits (164), Expect = 9.792e-11 Identity = 59/182 (32.42%), Postives = 80/182 (43.96%), Query Frame = 1 Query: 379 GRPEPYGSGRPESEYASGYAKRPDSQEYGSGYGKRPESEEYGSGYGRKPDSEVHGSGYGRRPESGESGFGGRTESEYG--GSAYGRKPEYESGYGQKPEYESGYGGKPGYESGYGSKPEFESGYGRKPEYESGYGSKPEFESGYGRKPEYESGYG-----SKHDDGVGYGSK--PHESGYGR 897 G+ +G S +SGY ++ GSG G+ P + GSG + P HGSG GR SG+ G G S +G S+ G+ Y S +G + SGY G+ G SG S+ E +GS SG+GR+ SG G +H G G+ S H SG GR Sbjct: 2037 GQSSSHGQHGSGSSQSSGYGRQ------GSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGPGLGESSGFGHHESSSGQSSSY-SQHGSGSGHSSGY-GQHGSRSGQSSRGERHGSSSGSSSRYGQHGSGSRQSSGHGRQ---GSGSGHSPSRGRHGSGSGHSSSHGQHGSGSGR 2207
BLAST of FC878469 vs. ExPASy Swiss-Prot
Match: IF2_DESRM (Translation initiation factor IF-2 OS=Desulfotomaculum reducens (strain MI-1) GN=infB PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.157e-11 Identity = 62/192 (32.29%), Postives = 85/192 (44.27%), Query Frame = 1 Query: 370 PGMGRPEPYGSGRPESEYASGYAKRPDSQEYGSG----YGKRPESEEYGSGYGRKPDSEVHGSGYGRRPESGESGFGGRTESEYGGSAYGRKPEYESG--YGQKPEYESG--YGGKP--GYESGYGSKPEFESG--YGRKPEYESGYGSKPEFESGYGRKPEYESG--YGSKHDDGVG--YGSKPHESGYGR 897 P G + G GRP++ G RP G YG RP+ + G YG +P G YG RP+ G+ G G YG +P+ G YG +P+ G YG +P G YG +P+ G YG +P+ G S+P YG +P+ G YG + G G YG +P + G GR Sbjct: 138 PRQGSAQQSGQGRPQANRPQGSQGRPYGGRPQGGQSRPYGDRPQGGQ-GRPYGDRPQGG-QGRPYGDRPQGGQGRPYGDRPQGGQGRPYGDRPQGGQGRPYGDRPQGGQGRPYGDRPQGGQSRPYGDRPQGGQGRPYGDRPQ---GGQSRP-----YGDRPQGGQGRPYGDRPQGGQGRHYGDRP-QGGQGR 318
BLAST of FC878469 vs. ExPASy Swiss-Prot
Match: KRA62_MOUSE (Keratin-associated protein 6-2 OS=Mus musculus GN=Krtap6-2 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.511e-11 Identity = 68/149 (45.64%), Postives = 74/149 (49.66%), Query Frame = 1 Query: 460 YGSGYGKRPESEEYGSGYGRKPDSEVHGSGYGRRPESGE-SGFGGRTESEYG---GSAYGRKPEYESGYGQKPEYESGYGGKPGYESGYGSKPEFESGYGRKPEYESGYGSKPEFESGYGRKPEYESGYGSKHDDGVGYGSKPHESGYG 894 YG GYG YGSGYG S +G GYG G SG+G + S YG GS YG Y SGYG Y SGYG GY SGYG + SGYG Y SGYG + SGYG Y SGYGS + G G G GYG Sbjct: 12 YGCGYGSG-----YGSGYGCGSGSG-YGCGYGSGYGCGYGSGYGCGSGSGYGCGYGSGYGCG--YGSGYGCG--YGSGYGC--GYGSGYGCG--YGSGYGCG--YGSGYGCG--YGSGYGCG--YGSGYGSGYGSGYGSGC---GCGYG 137 HSP 2 Score: 70.0922 bits (170), Expect = 1.973e-11 Identity = 78/175 (44.57%), Postives = 81/175 (46.29%), Query Frame = 1 Query: 394 YGSGRPESEYASGYAKRPDSQE---YGSGYGKRPESEEYGSGYGRKPDSEVHGSGYGRRPESGESGFGGRTESEYG---GSAYGRKPEYESGYGQKPEYESGYGGKPGYESGYGSKPEFESGYGRKPEYESGYGSKPEFESGYGRKPEYESGYGSKHDDGVGYGSKPHES--GYG 894 YGSG Y SGY S YGSGYG YGSGYG S +G GYG SG+G S YG GS YG Y SGYG Y SGYG GY SGYG + SGYG Y SGYG SGYG SGYGS G GYGS GYG Sbjct: 16 YGSG-----YGSGYGCGSGSGYGCGYGSGYGCG-----YGSGYGCGSGSG-YGCGYG-------SGYGCGYGSGYGCGYGSGYGCG--YGSGYGCG--YGSGYGC--GYGSGYGC--GYGSGYG--CGYGSGYG------SGYG------SGYGS--GCGCGYGSYYRSGCCGYG 148
BLAST of FC878469 vs. ExPASy Swiss-Prot
Match: FUS_BOVIN (RNA-binding protein FUS OS=Bos taurus GN=FUS PE=2 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 7.497e-11 Identity = 74/235 (31.49%), Postives = 99/235 (42.13%), Query Frame = 1 Query: 355 AYGFQPGMGRPE----PYG-------------SGRPESEYA--------SGYAKRPDSQEYGS--GYGKRPESEE-YGS-----GYGRKP---------DSEVHGSGYGRRPESG----ESGFGGRTESEYGGSAYGRKPEYE--SGYGQKPEYESGYGGKPGYESGYG-SKPEFESGYGRKPEYESGYGSKPEFESGYGRKPEYESGYGSKHDDGVGY-----GSKPHESGYGR 897 AY QPG G + PYG SG +S Y+ +GY+ + Q Y S GYG S+ YG GYG++P S SGYG+ P+ G +SG+GG+ +S YG++ Y GYGQ+ +Y S GG G YG +P SG G GYG++ + GYG + G G G GY G +P G GR Sbjct: 16 AYPTQPGQGYSQQSNQPYGQQSYGGYGQSTDTSGYGQSSYSGSYGQTQNTGYSTQSAPQGYSSAGGYGSSQSSQSSYGQQSSYPGYGQQPAPSGTSGSYGSSSQSSGYGQ-PQGGGYGQQSGYGGQQQS------YGQQQSYNPPQGYGQQSQYNSSGGGGGGGGGSYGQDQPSMSSGGG-----GGGYGNQDQ-SGGYGGGQQDRGGRG--RGGGGGYNRSSGGYEPRGRGGGR 235 The following BLAST results are available for this feature:
BLAST of FC878469 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878469 ID=FC878469; Name=FC878469; organism=Citrus clementina; type=EST; length=901bpback to top |