FC878493
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878493 vs. ExPASy Swiss-Prot
Match: HMT2_ARATH (Homocysteine S-methyltransferase 2 OS=Arabidopsis thaliana GN=HMT-2 PE=1 SV=1) HSP 1 Score: 365.925 bits (938), Expect = 1.443e-100 Identity = 183/246 (74.39%), Postives = 207/246 (84.15%), Query Frame = 3 Query: 60 DFLRQSGGAAVIDGGLATELERHGADLNDPLWSAKCLLTSPHLIRQVHLDYLEAGADILISASYQATIQGFEAKGFSREESETMLRRSVEIAREARDMYFERCSKSSCDSVTDDRILKHRPILVAASVGSYGAYLADGSEYSGNYGDAITVETLKDFHRRRVQVLVESAPDLIAFETIPNKIXXXXXXXXXXXXNIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGINCTLPDLLVG 797 DFL+Q+GG AVIDGGLATE ERHGADLNDPLWSAKCL+TSPHLI VHLDYLEAGADI+ SASYQATIQGFEAKGFSREESE++L++SVEIA EAR+ Y+++C SS DD+ILK RPILVAASVGSYGAYLADGSEYSG YGD+IT+E LKDFHRRR+QVL ES DLIAFETIPNKI ++KIP WFSFNSKDGVNVVSGDS+ EC SIAE+C++VV+VGINCT P + G Sbjct: 11 DFLKQTGGYAVIDGGLATEFERHGADLNDPLWSAKCLVTSPHLIHTVHLDYLEAGADIISSASYQATIQGFEAKGFSREESESLLKKSVEIATEARNSYYDKCGTSSS---MDDKILKKRPILVAASVGSYGAYLADGSEYSGIYGDSITLEKLKDFHRRRLQVLAESGADLIAFETIPNKIEAQAFADLLEEGDVKIPGWFSFNSKDGVNVVSGDSIKECISIAENCEKVVAVGINCTPPRFIEG 253
BLAST of FC878493 vs. ExPASy Swiss-Prot
Match: SMTA_ASTBI (Selenocysteine methyltransferase OS=Astragalus bisulcatus GN=SMTA PE=1 SV=1) HSP 1 Score: 358.607 bits (919), Expect = 2.304e-98 Identity = 176/242 (72.73%), Postives = 201/242 (83.06%), Query Frame = 3 Query: 57 TDFLRQSGGAAVIDGGLATELERHGADLNDPLWSAKCLLTSPHLIRQVHLDYLEAGADILISASYQATIQGFEAKGFSREESETMLRRSVEIAREARDMYFERCSKSSCDSVTDDRILKHRPILVAASVGSYGAYLADGSEYSGNYGDAITVETLKDFHRRRVQVLVESAPDLIAFETIPNKIXXXXXXXXXXXXNIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGINCTLP 782 TDFL Q+G AAVI GGL TEL+RHGADLNDPLWSAKCLL+ PHLIRQVHLDYLE GADI+I+ASYQATIQGF+AKGFS EE E +LRRSVEIAREARD+Y++RC++SS D+ D RILK RPIL+A SVGSYGAYLADGSE+SGNYGDAI ETLKDFHRR+VQ+L +S DL+AFE +PNK+ NI PAWF+F SKDG NVVSGDS+ EC SIAESC +VV+VGINCT P Sbjct: 7 TDFLHQAGRAAVIAGGLGTELQRHGADLNDPLWSAKCLLSCPHLIRQVHLDYLENGADIIITASYQATIQGFKAKGFSDEEGEALLRRSVEIAREARDLYYQRCAESSSDNGDDSRILKQRPILIAGSVGSYGAYLADGSEFSGNYGDAIKSETLKDFHRRKVQILADSGVDLLAFEAVPNKLEAQAYADLLEEENIITPAWFAFTSKDGNNVVSGDSIEECGSIAESCDKVVAVGINCTPP 248
BLAST of FC878493 vs. ExPASy Swiss-Prot
Match: HMT3_ARATH (Homocysteine S-methyltransferase 3 OS=Arabidopsis thaliana GN=HMT3 PE=1 SV=2) HSP 1 Score: 330.102 bits (845), Expect = 8.775e-90 Identity = 161/242 (66.53%), Postives = 195/242 (80.58%), Query Frame = 3 Query: 57 TDFLRQSGGAAVIDGGLATELERHGADLNDPLWSAKCLLTSPHLIRQVHLDYLEAGADILISASYQATIQGFEAKGFSREESETMLRRSVEIAREARDMYFERCSKSSCDSVTDDRILKHRPILVAASVGSYGAYLADGSEYSGNYGDAITVETLKDFHRRRVQVLVESAPDLIAFETIPNKIXXXXXXXXXXXXNIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGINCTLP 782 TDFL + GG AV+DGG ATEL+RHGAD+NDPLWSAKCL+TSPHL+ +VHLDYLE+GA+I+I+ASYQATIQGF AKG S E+E +LRRSVEI EAR++++ RC+K S D + + RPILVAASVGSYGAYLADGSEYSG YGD+++ ETLKDFHRRRVQ+L +S DLIAFETIPNK+ +I IPAWFSF SKDGV+V GDS++ECA +A+SCK VV++GINCT P Sbjct: 14 TDFLEKCGGYAVVDGGFATELQRHGADINDPLWSAKCLITSPHLVTKVHLDYLESGANIIITASYQATIQGFVAKGLSVGEAENLLRRSVEITYEAREIFYNRCTKGSWDFAYAGKASR-RPILVAASVGSYGAYLADGSEYSGIYGDSVSKETLKDFHRRRVQILAKSGADLIAFETIPNKLEAEAYADLLEEEDIDIPAWFSFTSKDGVSVPRGDSVVECAKVADSCKNVVAIGINCTAP 254
BLAST of FC878493 vs. ExPASy Swiss-Prot
Match: HMT2_MAIZE (Homocysteine S-methyltransferase 2 OS=Zea mays GN=HMT-2 PE=2 SV=1) HSP 1 Score: 317.39 bits (812), Expect = 5.886e-86 Identity = 159/241 (65.98%), Postives = 194/241 (80.50%), Query Frame = 3 Query: 75 SGGAAVIDGGLATELERHGADLNDPLWSAKCLLTSPHLIRQVHLDYLEAGADILISASYQATIQGFEAKGFSREESETMLRRSVEIAREARDMYFERCSKSSCDSVTDDRILKHRPILVAASVGSYGAYLADGSEYSGNYGDAITVETLKDFHRRRVQVLVESAPDLIAFETIPNKIXXXXXXXXXXXXNIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGINCTLPDLLVG 797 +GG V+DGGLATELE +GADLNDPLWSAKCLL+SPHLIR+VH+DYLEAGA+I+I+ASYQATIQGFE+KGFS+E+SE +L +SVEIA EAR+M+ + + S ++H P+LVAAS+GSYGAYLADGSEYSG+YG+A T E LKDFHRRR+QVL E+ PDLIAFETIPNK+ NI IPAWFSFNSKDGV++VSGDSL+EC +IA+ C +V +VGINCT P + G Sbjct: 20 AGGRLVLDGGLATELEANGADLNDPLWSAKCLLSSPHLIRKVHMDYLEAGANIIITASYQATIQGFESKGFSKEQSENLLTKSVEIALEAREMFLKEHLEKSTP-------IQH-PVLVAASLGSYGAYLADGSEYSGDYGEAGTKEFLKDFHRRRLQVLAEAGPDLIAFETIPNKLEAEAYVELLEECNINIPAWFSFNSKDGVHIVSGDSLIECTTIADKCAKVGAVGINCTPPRFIHG 252
BLAST of FC878493 vs. ExPASy Swiss-Prot
Match: HMT3_MAIZE (Homocysteine S-methyltransferase 3 OS=Zea mays GN=HMT-3 PE=2 SV=1) HSP 1 Score: 313.923 bits (803), Expect = 6.508e-85 Identity = 158/241 (65.56%), Postives = 194/241 (80.50%), Query Frame = 3 Query: 75 SGGAAVIDGGLATELERHGADLNDPLWSAKCLLTSPHLIRQVHLDYLEAGADILISASYQATIQGFEAKGFSREESETMLRRSVEIAREARDMYFERCSKSSCDSVTDDRILKHRPILVAASVGSYGAYLADGSEYSGNYGDAITVETLKDFHRRRVQVLVESAPDLIAFETIPNKIXXXXXXXXXXXXNIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGINCTLPDLLVG 797 +GG V+DGGLATELE +GADLNDPLWSAKCLL+SPHLIR+VH+DYLEAGA+I+I+ASYQATIQGFE+KGFS+E+SE +L +SV+IA EAR+M+ + + S ++H PILVAA++GSYGAYLADGSEYSG+YG+A T E LKDFHRRR+QVL E+ PDLIAFETIPNK+ NI IP+W SFNSKDGV+VVSGDSL+ECA+IA+ C +V +VGINCT P + G Sbjct: 20 AGGRLVLDGGLATELEANGADLNDPLWSAKCLLSSPHLIRKVHMDYLEAGANIIITASYQATIQGFESKGFSKEQSENLLTKSVQIALEAREMFLKEHLEKSTP-------IQH-PILVAAALGSYGAYLADGSEYSGDYGEAGTKEFLKDFHRRRLQVLAEAGPDLIAFETIPNKLEAQAYVELLEECNINIPSWLSFNSKDGVHVVSGDSLIECATIADKCAKVGAVGINCTPPRFIHG 252
BLAST of FC878493 vs. ExPASy Swiss-Prot
Match: HMT4_MAIZE (Homocysteine S-methyltransferase 4 OS=Zea mays GN=HMT-4 PE=2 SV=1) HSP 1 Score: 305.449 bits (781), Expect = 2.315e-82 Identity = 151/245 (61.63%), Postives = 187/245 (76.33%), Query Frame = 3 Query: 63 FLRQSGGAAVIDGGLATELERHGADLNDPLWSAKCLLTSPHLIRQVHLDYLEAGADILISASYQATIQGFEAKGFSREESETMLRRSVEIAREARDMYFERCSKSSCDSVTDDRILKHRPILVAASVGSYGAYLADGSEYSGNYGDAITVETLKDFHRRRVQVLVESAPDLIAFETIPNKIXXXXXXXXXXXXNIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGINCTLPDLLVG 797 F+R++GG AV+DGGL TELE HGADL+D LWSAKCL ++PHLIR+VHLDYLEAGAD++ISASYQATI+GF+++GFSR+ESE +LRRSV +A+EAR ++ +SS P LVAASVGSYGAY ADGSEYSG+YG ++T E LK+FHRRR+QVL + PDLIAFETIPNK+ I+IPAWFSF SKDGVN SGD + ECA++A+SC RV +VG+NCT P + G Sbjct: 17 FVREAGGCAVVDGGLGTELEAHGADLHDALWSAKCLASAPHLIRKVHLDYLEAGADVIISASYQATIEGFQSRGFSRDESEELLRRSVHVAQEARRVFAAEGDRSSRRG--------RPPALVAASVGSYGAYRADGSEYSGDYGKSMTKEDLKNFHRRRLQVLAGAGPDLIAFETIPNKLEAQVYAELLEENGIRIPAWFSFTSKDGVNAASGDPINECAAVADSCPRVDAVGVNCTAPRFIHG 253
BLAST of FC878493 vs. ExPASy Swiss-Prot
Match: HMT1_MAIZE (Homocysteine S-methyltransferase 1 OS=Zea mays GN=HMT-1 PE=2 SV=1) HSP 1 Score: 264.233 bits (674), Expect = 5.914e-70 Identity = 132/250 (52.80%), Postives = 173/250 (69.20%), Query Frame = 3 Query: 60 DFLRQSGGAAVIDGGLATELERHGADLNDPLWSAKCLLTSPHLIRQVHLDYLEAGADILISASYQATIQGFEAKGFSREESETMLRRSVEIAREARDMYFERCSKSSCDSVTDDRILKHRPI----LVAASVGSYGAYLADGSEYSGNYGDAITVETLKDFHRRRVQVLVESAPDLIAFETIPNKIXXXXXXXXXXXXNIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGINCTLPDLLVG 797 D + ++GG AVIDGG AT+LE GAD+NDPLWSA CL+T PHL+++VH+ YLEAGAD++IS+SYQATI GF A+G S E+E +LR SV++A EARD +++ + K +PI LVAAS+GSYGAYLADGSEYSG+YG IT E LKDFHRRR+QVL + PDLIAFE IPN++ ++IP+W F+S DG N+ SG+S +C I + ++V VG+NCT P + G Sbjct: 6 DLVARAGGCAVIDGGFATQLEALGADINDPLWSAACLITRPHLVKEVHMQYLEAGADVIISSSYQATIPGFIARGMSVAEAEDLLRTSVKLANEARDEFWK------------STLRKSKPIYNRALVAASIGSYGAYLADGSEYSGSYGADITAEKLKDFHRRRLQVLASAGPDLIAFEAIPNQMEAQALVELLEEEKVQIPSWICFSSVDGKNLCSGESFADCLKILNASEKVAVVGVNCTPPQFIEG 243
BLAST of FC878493 vs. ExPASy Swiss-Prot
Match: HMT1_ARATH (Homocysteine S-methyltransferase 1 OS=Arabidopsis thaliana GN=HMT-1 PE=1 SV=1) HSP 1 Score: 262.307 bits (669), Expect = 2.247e-69 Identity = 129/244 (52.87%), Postives = 173/244 (70.90%), Query Frame = 3 Query: 60 DFLRQSGGAAVIDGGLATELERHGADLNDPLWSAKCLLTSPHLIRQVHLDYLEAGADILISASYQATIQGFEAKGFSREESETMLRRSVEIAREARDMYFERCSKSSCDSVTDDRILKHRPILVAASVGSYGAYLADGSEYSGNYGDAITVETLKDFHRRRVQVLVESAPDLIAFETIPNKIXXXXXXXXXXXXNIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGINCTLPDLL 791 D +++ GG AV+DGG AT+LE HGA +NDPLWSA L+ +P LI++VH++YLEAGADI++++SYQATI GF ++G S EESE++L++SVE+A EARD ++E+ SK S S + LVAAS+GSYGAYLADGSEYSG+YG+ ++++ LKDFHRRR+QVLVE+ PDL+AFETIPNK+ ++IPAW F S DG SG+S EC + +VGINC P + Sbjct: 12 DLIKKCGGCAVVDGGFATQLEIHGAAINDPLWSAVSLIKNPELIKRVHMEYLEAGADIVVTSSYQATIPGFLSRGLSIEESESLLQKSVELAVEARDRFWEKVSKVSGHS--------YNRALVAASIGSYGAYLADGSEYSGHYGENVSLDKLKDFHRRRLQVLVEAGPDLLAFETIPNKLEAQACVELLEEEKVQIPAWICFTSVDGEKAPSGESFEECLEPLNKSNNIYAVGINCAPPQFI 247
BLAST of FC878493 vs. ExPASy Swiss-Prot
Match: HMT_BACSU (Homocysteine S-methyltransferase ybgG OS=Bacillus subtilis GN=ybgG PE=4 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 5.754e-49 Identity = 104/229 (45.41%), Postives = 149/229 (65.07%), Query Frame = 3 Query: 90 VIDGGLATELERHGADLNDPLWSAKCLLTSPHLIRQVHLDYLEAGADILISASYQATIQGFEAKGFSREESETMLRRSVEIAREARDMYFERCSKSSCDSVTDDRILKHRPILVAASVGSYGAYLADGSEYSGNYGDAITVETLKDFHRRRVQVLVESAPDLIAFETIPNKIXXXXXXXXXXXXNIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGINCT 776 V+DG +ATELER G +LND LWSAK L+ P LI+QVH DY AGAD I+ASYQ+T +GF A+G S E+ ++ SV IA EARD ++ S+ ++R+ + +PI +AAS+G YGAYLADGSEY GNY AI+ + L +FHR R++ L+E+ D++A ETIP + + AW SF++KDG+++ G +CAS + +++ ++GINCT Sbjct: 15 VLDGAMATELERKGCNLNDSLWSAKILMEEPELIKQVHTDYFAAGADCAITASYQSTFEGFAARGLSEAEARRLIELSVSIAAEARDEFW---------SLEENRLNRPKPI-IAASIGPYGAYLADGSEYRGNY--AISEDELIEFHRPRMKALIEAGADVLACETIP-CLTEAKAIVRLLKEFPETYAWISFSAKDGLHISDGTPAADCASWLDEHRQIAALGINCT 230
BLAST of FC878493 vs. ExPASy Swiss-Prot
Match: MMUM_ECOLI (Homocysteine S-methyltransferase OS=Escherichia coli (strain K12) GN=mmuM PE=1 SV=2) HSP 1 Score: 172.94 bits (437), Expect = 1.793e-42 Identity = 96/228 (42.11%), Postives = 135/228 (59.21%), Query Frame = 3 Query: 90 VIDGGLATELERHGADLNDPLWSAKCLLTSPHLIRQVHLDYLEAGADILISASYQATIQGFEAKGFSREESETMLRRSVEIAREARDMYFERCSKSSCDSVTDDRILKHRPILVAASVGSYGAYLADGSEYSGNYGDAITVETLKDFHRRRVQVLVESAPDLIAFETIPNKIXXXXXXXXXXXXNIKIPAWFSFNSKDGVNVVSGDSLLECASIAESCKRVVSVGINC 773 ++DG +ATELE G +L D LWSAK L+ +P LIR+VHLDY AGA I+ASYQAT GF A+G +S+ ++ +SVE+AR+AR+ Y ++ +LVA SVG YGAYLADGSEY G+Y +VE + FHR RV+ L+++ DL+A ET+PN + AWFSF +D ++ G L + ++ +VV++GINC Sbjct: 18 LLDGAMATELEARGCNLADSLWSAKVLVENPELIREVHLDYYRAGAQCAITASYQATPAGFAARGLDEAQSKALIGKSVELARKAREAYLAENPQAG-------------TLLVAGSVGPYGAYLADGSEYRGDY--HCSVEAFQAFHRPRVEALLDAGADLLACETLPN-FSEIEALAELLTAYPRARAWFSFTLRDSEHLSDGTPLRDVVALLAGYPQVVALGINC 229 The following BLAST results are available for this feature:
BLAST of FC878493 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878493 ID=FC878493; Name=FC878493; organism=Citrus clementina; type=EST; length=804bpback to top |