FC878494
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878494 vs. ExPASy Swiss-Prot
Match: CAX3_ARATH (Vacuolar cation/proton exchanger 3 OS=Arabidopsis thaliana GN=CAX3 PE=1 SV=1) HSP 1 Score: 287.345 bits (734), Expect = 7.863e-77 Identity = 156/263 (59.32%), Postives = 183/263 (69.58%), Query Frame = 1 Query: 133 EPW--LMENGSVKVLSK----EIRHGRTAHNMSSSSLRKKSDLTLVSKIRFPCLRRCLANIQEVILGTKLSVLFPAIPLAIIGQCFGFAEPWVFALSLLGLTPLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALYERKIDVVKYXXXXXXXXXXXXXXXXXXFCGGIANLRKEQKYDRKQADVNSXXXXXXXXXXXXXXXFKYAA---ASSDITAKATLQLSRASSIVMLIGYIAYLVFQLWTHREFFEAQED 894 EPW + ENG+ V +K E+RHGRTAHNMSSSSLRKKSDL LV K+ L+ L+N+QEVILGTKL++LF AIPLAI+ + + P +F LSL+GLTPLAERVSFLTEQ+AFYTGPTVGGLLNATCGNATELIIAI AL K+ VVKY F GGIAN+R+EQ++DRKQADVN KYAA S+ + K +L LSR SSIVMLI YIAYL+FQLWTHR+ FEAQ+D Sbjct: 6 EPWAAIAENGNANVTAKGSSRELRHGRTAHNMSSSSLRKKSDLRLVQKVPCKTLKNILSNLQEVILGTKLTLLFLAIPLAILANSYNYGRPLIFGLSLIGLTPLAERVSFLTEQLAFYTGPTVGGLLNATCGNATELIIAILALANNKVAVVKYSLLGSILSNLLLVLGTSLFFGGIANIRREQRFDRKQADVNFFLLLMGLLCHLLPLLLKYAATGEVSTSMINKMSLTLSRTSSIVMLIAYIAYLIFQLWTHRQLFEAQQD 268
BLAST of FC878494 vs. ExPASy Swiss-Prot
Match: CAX1_ARATH (Vacuolar cation/proton exchanger 1 OS=Arabidopsis thaliana GN=CAX1 PE=1 SV=3) HSP 1 Score: 281.182 bits (718), Expect = 5.635e-75 Identity = 152/262 (58.02%), Postives = 182/262 (69.47%), Query Frame = 1 Query: 130 TEPW-LMENGSVKVLSK----EIRHGRTAHNMSSSSLRKKSDLTLVSKIRFPCLRRCLANIQEVILGTKLSVLFPAIPLAIIGQCFGFAEPWVFALSLLGLTPLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALYERKIDVVKYXXXXXXXXXXXXXXXXXXFCGGIANLRKEQKYDRKQADVNSXXXXXXXXXXXXXXXFKY---AAASSDITAKATLQLSRASSIVMLIGYIAYLVFQLWTHREFFEAQE 891 TEPW + ENG+ + +K E+R GRTAHNMSSSSLRKKSDL ++ K+ + L+ L+N+QEVILGTKL++LFPAIP AII G ++PW+F LSLLGLTPLAERVSFLTEQ+AFYTGPT+GGLLNATCGNATELIIAI AL K+ VVKY FCGGIAN+R+EQ++DRKQADVN Y AS+ + + L +SR SIVMLI YIAYLVFQLWTHR+ F+AQE Sbjct: 6 TEPWSVAENGNPSITAKGSSRELRLGRTAHNMSSSSLRKKSDLRVIQKVPYKGLKDFLSNLQEVILGTKLAILFPAIPAAIICTYCGVSQPWIFGLSLLGLTPLAERVSFLTEQLAFYTGPTLGGLLNATCGNATELIIAILALTNNKVAVVKYSLLGSILSNLLLVLGTSLFCGGIANIRREQRFDRKQADVNFFLLLLGFLCHLLPLLVGYLKNGEASAAVLSDMQLSISRGFSIVMLISYIAYLVFQLWTHRQLFDAQE 267
BLAST of FC878494 vs. ExPASy Swiss-Prot
Match: CAX1A_ORYSJ (Vacuolar cation/proton exchanger 1a OS=Oryza sativa subsp. japonica GN=CAX1a PE=1 SV=1) HSP 1 Score: 254.603 bits (649), Expect = 5.648e-67 Identity = 143/242 (59.09%), Postives = 161/242 (66.53%), Query Frame = 1 Query: 187 HGR--TAHNMSSSSLRKKSDLTLVSKIRFPCLRRCLANIQEVILGTKLSVLFPAIPLAIIGQCFGFAEPWVFALSLLGLTPLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALYERKIDVVKYXXXXXXXXXXXXXXXXXXFCGGIANLRKEQKYDRKQADVNSXXXXXXXXXXXXXXXFKYAAAS-----SDITAKATLQLSRASSIVMLIGYIAYLVFQLWTHREFFEAQE 891 HGR TAHNMSSSSLRKKSD LV K+ LR LAN+QEV L TKL+VLFPA+PLAI QCF F + WVFALSLLGL PLAERVSFLTEQIA YTGPTVGGLLNATCGNATELIIA+FAL + KI+VVK FCGG+ NL Q YDR Q+DV++ +YA A+ S +A A+L LSRA S VML Y+AYL FQL THR+ FE QE Sbjct: 19 HGRSRTAHNMSSSSLRKKSDAALVRKVPVAPLRPLLANLQEVFLATKLAVLFPAVPLAIAAQCFRFDQVWVFALSLLGLIPLAERVSFLTEQIALYTGPTVGGLLNATCGNATELIIALFALLKGKIEVVKCSLLGSVLSNLLLVLGTSLFCGGVVNLGARQPYDRNQSDVSTALLFLAVLCHSAPLLLRYAVAAGEHSVSATSAAASLDLSRACSFVMLASYVAYLFFQLKTHRQLFEPQE 260
BLAST of FC878494 vs. ExPASy Swiss-Prot
Match: CAX1B_ORYSJ (Vacuolar cation/proton exchanger 1b OS=Oryza sativa subsp. japonica GN=CAX1b PE=2 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 6.259e-58 Identity = 126/236 (53.39%), Postives = 150/236 (63.56%), Query Frame = 1 Query: 193 RTAHNMSSSSLRKKSDLTLVSKIRFPCLRRCLANIQEVILGTKLSVLFPAIPLAIIGQCFGFAEPWVFALSLLGLTPLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALYERKIDVVKYXXXXXXXXXXXXXXXXXXFCGGIANLRKEQKYDRKQADVNSXXXXXXXXXXXXXXXFKYAAASSD---ITAKATLQLSRASSIVMLIGYIAYLVFQLWTHREFFEAQE 891 RTAHN+SSSSLRK SD +L+ K+ LR LAN+ +V+L T+L +LFPA+ LAI F + WVF LSL+GL PLAER+SFLTEQIAFYTGPTVGGLLNAT GN TE+IIA+ AL E KI+VVK F GIANLR Q YD KQA VN+ +YA S D ++ A L LSRA SI+MLI Y+AYL FQL THR+ FE Q+ Sbjct: 31 RTAHNLSSSSLRKSSDASLLHKVPCAALRSLLANLNDVLLTTRLFLLFPAVLLAIAATYLHFGQVWVFVLSLIGLVPLAERLSFLTEQIAFYTGPTVGGLLNATFGNVTEVIIALLALREGKIEVVKCSLLGSILSNLLLVLGTSLFLAGIANLRAHQPYDTKQAHVNTALLMLAVLCHSLPLMLRYAVTSGDHAIVSGDAALHLSRACSILMLIAYLAYLFFQLNTHRQLFEPQQ 266
BLAST of FC878494 vs. ExPASy Swiss-Prot
Match: CAX4_ARATH (Vacuolar cation/proton exchanger 4 OS=Arabidopsis thaliana GN=CAX4 PE=1 SV=2) HSP 1 Score: 216.468 bits (550), Expect = 1.705e-55 Identity = 119/245 (48.57%), Postives = 159/245 (64.90%), Query Frame = 1 Query: 142 LMENG---SVKVLSKEIRHGRTAHNMSSSSL-RKKSDLTLVSKIRFPCLRRCLANIQEVILGTKLSVLFPAIPLAIIGQCFGFAEPWVFALSLLGLTPLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALYERKIDVVKYXXXXXXXXXXXXXXXXXXFCGGIANLRKEQKYDRKQADVNSXXXXXXXXXXXXXXXFKYAAASSDITAKATLQLSRASSIVMLIGYIAYLVFQLWT 864 L+ENG S K ++ R R +S+SSL RK+SDL L+S++R+ +RR L N+QEV+LGTKL +LFPA+PLA++ + WVFALSLLGLTPLAER+SFLTEQIAF+TGPTVGGL+NATCGNATE+IIAI A+ +RK+ +VK F GGI+NLRK Q +D +Q D+NS ++ + + + LSRASS VMLI Y+A+L+F L++ Sbjct: 14 LLENGGGGSDKPTAETSR--RVRRTVSASSLIRKRSDLKLISRVRWEFMRRILTNLQEVLLGTKLFILFPAVPLAVVAHRYDCPRAWVFALSLLGLTPLAERISFLTEQIAFHTGPTVGGLMNATCGNATEMIIAILAVGQRKMRIVKLSLLGSILSNLLFVLGTSLFLGGISNLRKHQSFDPRQGDMNSMLLYLALLCQTLPMIMRFTMEAEEYDGSDVVVLSRASSFVMLIAYLAFLIFHLFS 256
BLAST of FC878494 vs. ExPASy Swiss-Prot
Match: CAX1C_ORYSJ (Vacuolar cation/proton exchanger 1c OS=Oryza sativa subsp. japonica GN=CAX1c PE=2 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 3.016e-44 Identity = 98/215 (45.58%), Postives = 131/215 (60.93%), Query Frame = 1 Query: 268 PCLRRCL----ANIQEVILGTKLSVLFPAIPLAIIGQCFGFAEPWVFALSLLGLTPLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALYERKIDVVKYXXXXXXXXXXXXXXXXXXFCGGIANLRKEQKYDRKQADVNSXXXXXXXXXXXXXXXFKYAAASSD-ITAKATLQLSRASSIVMLIGYIAYLVFQLWTHREFFEAQEDS 897 P LRR L A +QEV+LGTKL LF A+PLA+ + WVFA SL+GL PLAERVSFL+E IA GPT GG++NATCGN ELIIA+FAL++ K++++K+ GGI N+ KE+ D++QADV+ KY +++ D I + + +QLSR+ +IVMLI Y L+FQL THR+ FE +EDS Sbjct: 59 PLLRRLLGGPAAQLQEVLLGTKLYPLFSAVPLAVAAESLRLGRVWVFAFSLIGLAPLAERVSFLSEHIANTVGPTAGGIMNATCGNVPELIIALFALHKNKMEILKWSLLGSILSNLLLVLGSSLLFGGIVNIGKERPLDKRQADVSIGLLLLGVLCHIATLVSKYTSSTGDSINSSSVMQLSRSCAIVMLIAYFGSLMFQLKTHRQIFELEEDS 273
BLAST of FC878494 vs. ExPASy Swiss-Prot
Match: CAX2_ARATH (Vacuolar cation/proton exchanger 2 OS=Arabidopsis thaliana GN=CAX2 PE=1 SV=2) HSP 1 Score: 135.191 bits (339), Expect = 4.994e-31 Identity = 85/192 (44.27%), Postives = 109/192 (56.77%), Query Frame = 1 Query: 286 LANIQEVILGTKLSVLFPAIPLAIIGQCFGFAEPWVFALSLLGLTPLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALYERKIDVVKYXXXXXXXXXXXXXXXXXXFCGGIANLRKEQKYDRKQADVNSXXXXXXXXXXXXXXXFKYAAASSDITA-KATLQLSRASSIVMLIGYIAYLVFQL 858 L +I+ VI KL++L P PLAI+ ++ WVF L+L+G+TPLAER+ + TEQ+A YTGPTVGGLLNAT GN TELII+IFAL I VV+ FCGG+ +K+Q +D+ A VNS Y S++ A + L LSR SS +MLI Y AYL FQL Sbjct: 65 LNSIKIVIFCNKLNLLLPFGPLAILVHYMIDSKGWVFLLTLVGITPLAERLGYATEQLACYTGPTVGGLLNATFGNVTELIISIFALKNGMIRVVQLTLLGSILSNMLLVLGCAFFCGGLVFYQKDQVFDKGIATVNSGLLLMAVMGILFPAVLHY--THSEVHAGSSELALSRFSSCIMLIAYAAYLFFQL 254
BLAST of FC878494 vs. ExPASy Swiss-Prot
Match: CAX5_ARATH (Vacuolar cation/proton exchanger 5 OS=Arabidopsis thaliana GN=CAX5 PE=2 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 8.519e-31 Identity = 84/192 (43.75%), Postives = 107/192 (55.73%), Query Frame = 1 Query: 286 LANIQEVILGTKLSVLFPAIPLAIIGQCFGFAEPWVFALSLLGLTPLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALYERKIDVVKYXXXXXXXXXXXXXXXXXXFCGGIANLRKEQKYDRKQADVNSXXXXXXXXXXXXXXXFKYAAASSDITA-KATLQLSRASSIVMLIGYIAYLVFQL 858 L + + VIL KL++L P PLAI+ + W+F LSL+G+TPLAER+ + TEQ+A YTG TVGGLLNAT GN TELII+IFAL I VV+ FCGG+ +KEQ +D+ A VNS Y S++ A + L LSR SS +ML+ Y AYL FQL Sbjct: 65 LQSFKIVILSNKLNLLLPFGPLAILLHYLTDNKGWIFLLSLVGITPLAERLGYATEQLACYTGSTVGGLLNATFGNVTELIISIFALKSGMIRVVQLTLLGSILSNMLLVLGCAFFCGGLVFSQKEQVFDKGNAVVNSGLLLMAVMGLLFPAVLHY--THSEVHAGSSELALSRFSSCIMLVAYAAYLFFQL 254
BLAST of FC878494 vs. ExPASy Swiss-Prot
Match: CAX2_ORYSJ (Vacuolar cation/proton exchanger 2 OS=Oryza sativa subsp. japonica GN=CAX2 PE=2 SV=2) HSP 1 Score: 130.954 bits (328), Expect = 9.418e-30 Identity = 76/202 (37.62%), Postives = 111/202 (54.95%), Query Frame = 1 Query: 277 RRCLANIQEVILGTKLSVLFPAIPLAIIGQCFGFA-EPWVFALSLLGLTPLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALYERKIDVVKYXXXXXXXXXXXXXXXXXXFCGGIANLRKEQKYDRKQADVNSXXXXXXXXXXXXXXXFKYAAASSDITAKATLQLSRASSIVMLIGYIAYLVFQLWTHREFF 879 RR L +++ VIL K++VL P PLA++ + WVF SL+G+TPLAER+ + TEQ+A YTGPT+GGLLNAT GNATE+II+++AL I VV+ F GG+ + ++Q +++ A VNS + + K+ + LSR SS +ML+ Y +YL FQL + R + Sbjct: 58 RRALTSVRVVILQAKINVLLPFGPLAVMLHYLSANHQGWVFLFSLIGITPLAERLGYATEQLALYTGPTIGGLLNATFGNATEMIISLYALKNGMIRVVQQSLLGSILSNMLLVLGCAFFAGGLVHPSRDQVFNKASAVVNSGLLLMAVLGLMFPAVLHFTHSEVQY-GKSEVSLSRFSSCIMLVAYASYLFFQLKSQRSLY 258
BLAST of FC878494 vs. ExPASy Swiss-Prot
Match: CAX6_ARATH (Putative vacuolar cation/proton exchanger 6 OS=Arabidopsis thaliana GN=CAX6 PE=3 SV=3) HSP 1 Score: 123.25 bits (308), Expect = 1.964e-27 Identity = 78/193 (40.41%), Postives = 103/193 (53.37%), Query Frame = 1 Query: 304 VILGTKLSVLFPAIPLAIIGQCFGFAEPWVFALSLLGLTPLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALYERKIDVVKYXXXXXXXXXXXXXXXXXXFCGGIANLRKEQKYDRKQADVNSXXXXXXXXXXXXXXXFKYAAASSDITA-KATLQLSRASSIVMLIGYIAYLVFQLWTHREFF 879 VIL KL++L P PLAI+ + W F LSL+G+TPLAER+ + TEQ++ YTG TVGGLLNAT GN ELII+I AL I VV+ FCGG+ K+Q +D++ A V+S Y S++ A + L LSR S +ML+ Y AYL FQL + F+ Sbjct: 82 VILSNKLNLLLPFGPLAILVHYLTDNKGWFFLLSLVGITPLAERLGYATEQLSCYTGATVGGLLNATFGNVIELIISIIALKNGMIRVVQLTLLGSILSNILLVLGCAFFCGGLVFPGKDQVFDKRNAVVSSGMLLMAVMGLLFPTFLHY--THSEVHAGSSELALSRFISCIMLVAYAAYLFFQLKSQPSFY 272 The following BLAST results are available for this feature:
BLAST of FC878494 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878494 ID=FC878494; Name=FC878494; organism=Citrus clementina; type=EST; length=901bpback to top |