FC916152
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC916152 vs. ExPASy Swiss-Prot
Match: YHCM_ECOLI (Uncharacterized protein yhcM OS=Escherichia coli (strain K12) GN=yhcM PE=1 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 5.733e-16 Identity = 51/130 (39.23%), Postives = 72/130 (55.38%), Query Frame = 2 Query: 494 PLVEYERRIIAGELLDGDVRQLGTLEELQRLYDELVESADACKLDRYSSSEKSGRSRWLWSRLLPQSSYSPVKGLYLYGGVGTGKTMLMDLFFYQLPCNWRKKRIHFHDFMLNVHSRLQKHKGVSDPLEV 883 P +Y + + G DV Q + L+ +Y EL+ S +S R LW + + ++PV+GLY++GGVG GKT LMDLF+ LP RK+R+HFH FML VH L +G +DPLE+ Sbjct: 6 PTSQYLKALNEGSHQPDDV-QKEAVSRLEIIYQELINSTPPAP----RTSGLMARVGKLWGKR-EDTKHTPVRGLYMWGGVGRGKTWLMDLFYQSLP-GERKQRLHFHRFMLRVHEELTALQGQTDPLEI 128
BLAST of FC916152 vs. ExPASy Swiss-Prot
Match: YHCM_ECO57 (Uncharacterized protein yhcM OS=Escherichia coli O157:H7 GN=yhcM PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 5.733e-16 Identity = 51/130 (39.23%), Postives = 72/130 (55.38%), Query Frame = 2 Query: 494 PLVEYERRIIAGELLDGDVRQLGTLEELQRLYDELVESADACKLDRYSSSEKSGRSRWLWSRLLPQSSYSPVKGLYLYGGVGTGKTMLMDLFFYQLPCNWRKKRIHFHDFMLNVHSRLQKHKGVSDPLEV 883 P +Y + + G DV Q + L+ +Y EL+ S +S R LW + + ++PV+GLY++GGVG GKT LMDLF+ LP RK+R+HFH FML VH L +G +DPLE+ Sbjct: 6 PTSQYLKALNEGSHQPDDV-QKEAVSRLEIIYQELINSTPPAP----RTSGLMARVGKLWGKR-EDTKHTPVRGLYMWGGVGRGKTWLMDLFYQSLP-GERKQRLHFHRFMLRVHEELTALQGQTDPLEI 128
BLAST of FC916152 vs. ExPASy Swiss-Prot
Match: LACE1_HUMAN (Lactation elevated protein 1 OS=Homo sapiens GN=LACE1 PE=2 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 4.109e-14 Identity = 54/140 (38.57%), Postives = 78/140 (55.71%), Query Frame = 2 Query: 440 TDAAASASIGEVHRAAAGPLVEYERRIIAGELLDGDVRQLGTLEELQRLYDELVESADACKLDRYSSSEKSGRSRWLWSRLLPQSSYSPVKGLYLYGGVGTGKTMLMDLFFYQLPCNWRKKRIHFHDFMLNVHSRLQKHK 859 T A S + + GPL Y+ I A EL D D Q ++ LQ+L+++L + + E G L+S+L +S P +GLY+YG VGTGKTM+MD+F+ + RKKR+HFH FML+VH R+ + K Sbjct: 57 TPTATSETYLKALAVCHGPLDHYDFLIKAHELKD-DEHQRRVIQCLQKLHEDL----------KGYNIEAEG----LFSKLFSRSK--PPRGLYVYGDVGTGKTMVMDMFYAYVEMK-RKKRVHFHGFMLDVHKRIHRLK 178
BLAST of FC916152 vs. ExPASy Swiss-Prot
Match: AFG1_YEAST (Protein AFG1 OS=Saccharomyces cerevisiae GN=AFG1 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.196e-13 Identity = 54/133 (40.60%), Postives = 70/133 (52.63%), Query Frame = 2 Query: 494 PLVEYERRIIAGELLDGDVRQLGTLEELQRLYDELVESADACKLDRYSSSEKSGRSRWL------WSRLLPQS--SYSPV--------KGLYLYGGVGTGKTMLMDLFFYQLPCNWRKKRIHFHDFMLNVHSR 844 PL EY+R + G+L D D Q G + L LYD LV+ + + G WL +SR P++ +Y V +G+YLYG VG GKTMLMDLF+ +P + KKRIHFH FM VH R Sbjct: 36 PLQEYDRLVKLGKLRD-DTYQRGIISSLGDLYDSLVKYVPPVVKTPNAVDQVGG---WLNGLKSVFSRGKPKNIGAYVDVSKIGNSIPRGVYLYGDVGCGKTMLMDLFYTTIPNHLTKKRIHFHQFMQYVHKR 164
BLAST of FC916152 vs. ExPASy Swiss-Prot
Match: LACE1_RAT (Lactation elevated protein 1 OS=Rattus norvegicus GN=Lace1 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.012e-12 Identity = 51/137 (37.23%), Postives = 76/137 (55.47%), Query Frame = 2 Query: 449 AASASIGEVHRAAAGPLVEYERRIIAGELLDGDVRQLGTLEELQRLYDELVESADACKLDRYSSSEKSGRSRWLWSRLLPQSSYSPVKGLYLYGGVGTGKTMLMDLFFYQLPCNWRKKRIHFHDFMLNVHSRLQKHK 859 AAS + GPL Y+ I A EL + D Q ++ LQ+L ++L + + E+ G L+S+L ++ P KGLY+YG VGTGKTM+MD+F+ + K+R+HFH FML+VH R+ + K Sbjct: 60 AASEAHSRALAVCHGPLAHYDFLIKAQELKN-DEHQRRVVQCLQKLQEDL----------KGYNIEEGG----LFSKLFSRNK--PPKGLYVYGDVGTGKTMVMDMFYEYVEVK-SKRRVHFHGFMLDVHKRIHRLK 178
BLAST of FC916152 vs. ExPASy Swiss-Prot
Match: LACE1_MOUSE (Lactation elevated protein 1 OS=Mus musculus GN=Lace1 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.012e-12 Identity = 50/123 (40.65%), Postives = 72/123 (58.54%), Query Frame = 2 Query: 491 GPLVEYERRIIAGELLDGDVRQLGTLEELQRLYDELVESADACKLDRYSSSEKSGRSRWLWSRLLPQSSYSPVKGLYLYGGVGTGKTMLMDLFFYQLPCNWRKKRIHFHDFMLNVHSRLQKHK 859 GPL Y+ I + EL + D Q ++ LQ+L ++L + S E+ G L+S+L ++ P KGLY+YG VGTGKTM+MD+F+ + RKKR+HFH FML+VH R+ K Sbjct: 74 GPLDHYDFLIKSQELRE-DEHQRRVVQCLQKLQEDL----------KGYSIEEGG----LFSKLFSRNK--PPKGLYVYGDVGTGKTMVMDMFYAYVETK-RKKRVHFHGFMLDVHRRIHHLK 178
BLAST of FC916152 vs. ExPASy Swiss-Prot
Match: LACE1_DANRE (Lactation elevated protein 1 homolog OS=Danio rerio GN=lace1 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.846e-12 Identity = 40/86 (46.51%), Postives = 51/86 (59.30%), Query Frame = 2 Query: 602 ESADACKLDRYSSSEKSGRSRWLWSRLLPQSSYSPVKGLYLYGGVGTGKTMLMDLFFYQLPCNWRKKRIHFHDFMLNVHSRLQKHK 859 E+ + C+ D S+EK + S P +G Y+YG VGTGKTMLMDL FY N RKKR+HF+ FML+VH R+ K K Sbjct: 124 ETVNICRPDENVSNEKEDQQE-------ESSKPHPPQGYYIYGNVGTGKTMLMDL-FYSFVENRRKKRVHFNGFMLDVHRRIHKLK 201 The following BLAST results are available for this feature:
BLAST of FC916152 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC916152 ID=FC916152; Name=FC916152; organism=Citrus clementina; type=EST; length=885bpback to top |