FC917087
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC917087 vs. ExPASy Swiss-Prot
Match: CHIA_MOUSE (Acidic mammalian chitinase OS=Mus musculus GN=Chia PE=1 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 6.986e-15 Identity = 51/155 (32.90%), Postives = 74/155 (47.74%), Query Frame = 1 Query: 394 AAYWPSFNDFPASSIDTSYFTHIYYAFLLPEPNTFKLNVTLLDHAKLLELVGTLRVQNSHIKXXXXXXXXXXDPNVFSKMASTKETRAIFINSTIEIARKYGFDGVDLDWEFPAN----DQDMSNLALLFKQWRTSINQEARITNTSPLLLTAAV 846 A Y P F I+ TH+ YAF + N ++ + L + L+ +NS +K F+ M ST + R FI S I+ R+YGFDG+DLDWE+P + QD +L K+ R + QEA +N L++TAAV Sbjct: 32 AQYRPGLGSFKPDDINPCLCTHLIYAFAGMQNN--EITTIEWNDVTLYKAFNDLKNRNSKLKTLLAIGGWNFGTAPFTTMVSTSQNRQTFITSVIKFLRQYGFDGLDLDWEYPGSRGSPPQDKHLFTVLVKEMREAFEQEAIESNRPRLMVTAAV 184
BLAST of FC917087 vs. ExPASy Swiss-Prot
Match: CHIA_RAT (Acidic mammalian chitinase OS=Rattus norvegicus GN=Chia PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 9.124e-15 Identity = 51/155 (32.90%), Postives = 74/155 (47.74%), Query Frame = 1 Query: 394 AAYWPSFNDFPASSIDTSYFTHIYYAFLLPEPNTFKLNVTLLDHAKLLELVGTLRVQNSHIKXXXXXXXXXXDPNVFSKMASTKETRAIFINSTIEIARKYGFDGVDLDWEFPAN----DQDMSNLALLFKQWRTSINQEARITNTSPLLLTAAV 846 A Y P F I+ TH+ YAF + N ++ + L + L+ +NS +K F+ M ST + R FI S I+ R+YGFDG+DLDWE+P + QD +L K+ R + QEA +N L++TAAV Sbjct: 32 AQYRPGLGSFKPDDINPCLCTHLIYAFAGMQNN--QITTIEWNDVTLYKAFNDLKNRNSKLKTLLAIGGWNFGTAPFTTMVSTSQNRQTFITSVIKFLRQYGFDGLDLDWEYPGSRGSPPQDKHLFTVLVKELREAFEQEAIESNRPRLMVTAAV 184
BLAST of FC917087 vs. ExPASy Swiss-Prot
Match: CHIA_BOVIN (Acidic mammalian chitinase OS=Bos taurus GN=CHIA PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.556e-14 Identity = 50/155 (32.26%), Postives = 73/155 (47.10%), Query Frame = 1 Query: 394 AAYWPSFNDFPASSIDTSYFTHIYYAFLLPEPNTFKLNVTLLDHAKLLELVGTLRVQNSHIKXXXXXXXXXXDPNVFSKMASTKETRAIFINSTIEIARKYGFDGVDLDWEFP----ANDQDMSNLALLFKQWRTSINQEARITNTSPLLLTAAV 846 A Y P F +ID TH+ YAF + ++ + L L+ +NS +K F+ M +T E R FI+S I+ +YGFDG+D DWE+P + QD +L ++ R + QEA+ TN LL+TAAV Sbjct: 32 AQYRPGLGSFKPDNIDPCLCTHLIYAFA--GMSNSEITTIEWNDVALYSSFNDLKKKNSQLKILLAIGGWNFGTAPFTAMVATPENRKTFISSVIKFLHQYGFDGLDFDWEYPGFRGSPSQDKHLFTVLVQETREAFEQEAKQTNKPRLLVTAAV 184
BLAST of FC917087 vs. ExPASy Swiss-Prot
Match: CHIA_HUMAN (Acidic mammalian chitinase OS=Homo sapiens GN=CHIA PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 4.528e-14 Identity = 50/155 (32.26%), Postives = 73/155 (47.10%), Query Frame = 1 Query: 394 AAYWPSFNDFPASSIDTSYFTHIYYAFLLPEPNTFKLNVTLLDHAKLLELVGTLRVQNSHIKXXXXXXXXXXDPNVFSKMASTKETRAIFINSTIEIARKYGFDGVDLDWEFPAN----DQDMSNLALLFKQWRTSINQEARITNTSPLLLTAAV 846 A Y P F +ID TH+ YAF + N ++ + L + L+ +NS +K F+ M ST E R FI S I+ R+Y FDG+D DWE+P + QD +L ++ R + QEA+ N L++TAAV Sbjct: 32 AQYRPGLGRFMPDNIDPCLCTHLIYAFAGRQNN--EITTIEWNDVTLYQAFNGLKNKNSQLKTLLAIGGWNFGTAPFTAMVSTPENRQTFITSVIKFLRQYEFDGLDFDWEYPGSRGSPPQDKHLFTVLVQEMREAFEQEAKQINKPRLMVTAAV 184
BLAST of FC917087 vs. ExPASy Swiss-Prot
Match: CHIT_CAEEL (Probable endochitinase OS=Caenorhabditis elegans GN=cht-1 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.485e-12 Identity = 36/101 (35.64%), Postives = 56/101 (55.45%), Query Frame = 1 Query: 544 VGTLRVQNSHIKXXXXXXXXXXDPNVFSKMASTKETRAIFINSTIEIARKYGFDGVDLDWEFPANDQDMSNLALLFKQWRTSINQEARITNTSPLLLTAAV 846 V L+V ++ +K +F MA++ +R +FI+S I R +GFDG+D+DWE+P+ DM+N L K+ + + EA T LL+TAAV Sbjct: 119 VNKLKVTDTQLKTLLSFGGWSFGTALFQGMAASSASRKVFIDSAITFVRTWGFDGIDIDWEYPSGATDMANYVALVKELKAACESEAGSTGKDRLLVTAAV 219
BLAST of FC917087 vs. ExPASy Swiss-Prot
Match: CH3L4_MOUSE (Chitinase-3-like protein 4 OS=Mus musculus GN=Chi3l4 PE=1 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 5.535e-12 Identity = 45/151 (29.80%), Postives = 73/151 (48.34%), Query Frame = 1 Query: 406 PSFNDFPASSIDTSYFTHIYYAFLLPEPNTFKLNVTLLDHAKL--LELVGTLRVQNSHIKXXXXXXXXXXDPNVFSKMASTKETRAIFINSTIEIARKYGFDGVDLDWEFPAN----DQDMSNLALLFKQWRTSINQEARITNTSPLLLTA 840 P+ F +ID TH+ YAF + N +T L L E + L+ +N+ +K P FS M ST + R FI S I R+Y FDG++LDW++P + +D ++L ++ R + +E+ + + LLLT+ Sbjct: 36 PTEGSFKPGNIDPCLCTHLIYAFAGMKNN----EITYLSEQDLRDYEALNGLKDRNTELKTLLAIGGWKFGPAPFSSMVSTPQNRQTFIKSVIRFLRQYNFDGLNLDWQYPGSRGSPPKDKHLFSVLVQEMRKAFEEESTLNHIPRLLLTS 182
BLAST of FC917087 vs. ExPASy Swiss-Prot
Match: CHIT1_HUMAN (Chitotriosidase-1 OS=Homo sapiens GN=CHIT1 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.233e-11 Identity = 45/146 (30.82%), Postives = 64/146 (43.84%), Query Frame = 1 Query: 421 FPASSIDTSYFTHIYYAFLLPEPNTFKLNVTLLDHAKLLELVGTLRVQNSHIKXXXXXXXXXXDPNVFSKMASTKETRAIFINSTIEIARKYGFDGVDLDWEFPAND----QDMSNLALLFKQWRTSINQEARITNTSPLLLTAAV 846 F +D S TH+ YAF +L+ T + L + L+ N +K F+ M +T R F+NS I RKY FDG+DLDWE+P + D L + + QEA+ + LLL+AAV Sbjct: 41 FLPKDLDPSLCTHLIYAFA--GMTNHQLSTTEWNDETLYQEFNGLKKMNPKLKTLLAIGGWNFGTQKFTDMVATANNRQTFVNSAIRFLRKYSFDGLDLDWEYPGSQGSPAVDKERFTTLVQDLANAFQQEAQTSGKERLLLSAAV 184
BLAST of FC917087 vs. ExPASy Swiss-Prot
Match: CH3L3_MOUSE (Chitinase-3-like protein 3 OS=Mus musculus GN=Chi3l3 PE=1 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 1.233e-11 Identity = 45/149 (30.20%), Postives = 72/149 (48.32%), Query Frame = 1 Query: 406 PSFNDFPASSIDTSYFTHIYYAFLLPEPNTFKLNVTLLDHAKLLELVGTLRVQNSHIKXXXXXXXXXXDPNVFSKMASTKETRAIFINSTIEIARKYGFDGVDLDWEFPAN----DQDMSNLALLFKQWRTSINQEARITNTSPLLLTA 840 P F +ID TH+ YAF + N ++ T + E + L+ +N+ +K P FS M ST + R IFI S I R+Y FDG++LDW++P + +D ++L K+ R + +E+ + LLLT+ Sbjct: 36 PIEGSFKPGNIDPCLCTHLIYAFAGMQNN--EITYTHEQDLRDYEALNGLKDKNTELKTLLAIGGWKFGPAPFSAMVSTPQNRQIFIQSVIRFLRQYNFDGLNLDWQYPGSRGSPPKDKHLFSVLVKEMRKAFEEESVEKDIPRLLLTS 182 The following BLAST results are available for this feature:
BLAST of FC917087 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC917087 ID=FC917087; Name=FC917087; organism=Citrus clementina; type=EST; length=943bpback to top |