FC917089

Overview
NameFC917089
Unique NameFC917089
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length925
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig7572 contig Ccv1_Contig7572:1..925. BLAST: Citrus Unigene V1 Contigs to SwissProt
Homology
BLAST of FC917089 vs. ExPASy Swiss-Prot
Match: YN22_SCHPO (Uncharacterized transporter C530.02 OS=Schizosaccharomyces pombe GN=SPBC530.02 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.817e-18
Identity = 53/193 (27.46%), Postives = 95/193 (49.22%), Query Frame = 3
Query:  357 NWPSWKKWMYLCSVATIQIAMNYNTSVYPNAVAPLVEEFGITEQKARTGQMIYLIFYSFGCELWAPWSEEFGRWPILQLSETLINIFILPAALANNFGSILAGRALSG------LSTAGGSVTLGLIADLYEPDEQQWPLAFIVLASCIGTSIGGVIGGPI-ERFLHWRWNFWIQLIFNGGA-QAIHFFMPES 911
            NWP WKKW+ +  ++ I   + + +SVY + +  +  +FG++   +  G  ++L+ + FG   +AP S  +GR+ +   +  +  +F +    A N  +++  R   G      LS  GG+     ++DL+ P ++ + L        +G   G +IG  I + +L W W FWI +I        I FFMPE+
Sbjct:   92 NWPMWKKWIVVVQISLIAFVVTFGSSVYSSGIGNVSMDFGVSISVSSLGSCVFLVGFGFGSLPFAPLSGIYGRFVVYFCTLLMFTLFQIGGGCAQNIWTLVILRFFQGFFGSTPLSNCGGT-----LSDLFTPIQRTYVLPGFCTFPFLGPIFGPIIGDFICQSYLGWCWVFWINMIMGAVVIVIIFFFMPET 279          
BLAST of FC917089 vs. ExPASy Swiss-Prot
Match: YCT4_SCHPO (Uncharacterized transporter C794.04c OS=Schizosaccharomyces pombe GN=SPCC794.04c PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.231e-17
Identity = 61/219 (27.85%), Postives = 105/219 (47.95%), Query Frame = 3
Query:  273 NTHNEKTNVRPDGKRELTEEDAYDILA-YNWPSWKKWMYLCSVATIQIAMNYNTSVYPNAVAPLVEEFGITEQKARTGQMIYLIFYSFGCELWAPWSEEFGRWPILQLSETLINIFILPAALANNFGSILAGRALSG-LSTAGGSVTLGLIADLYEPDEQQWPLAFIVLASCIGTSIGGVIGGPI-ERFLHWRWNFWIQLIFNGGAQAI-HFFMPESRA 917
            NT ++  +   +   ++  E   D LA  NWP WKK   L   + I I +  N+S++ +      +++ +           +L+ ++ G  L+AP SE +GR P+  ++  +  +F +    + N  S++  R   G       S   G I+DL+ P ++   L     A+ +G  +G V+GG I E  L WRW+FWI +I+ G    I  F MPE+ +
Sbjct:   72 NTTSDTEDDSGEDSYQVEWESGKDPLAPKNWPMWKKIYTLLVASFIAIVITANSSIFSDGGGIAAQQYHVGATVGDLCSATFLLGFAAGSVLFAPLSEVYGRLPLYSVTLVIFVVFQIGGGCSKNIWSLVIFRFFHGFFGCTPMSACGGTISDLFNPIQRTGALLVFCAAAFVGPLVGPVMGGYITESKLGWRWDFWINMIWAGLTWVIVCFTMPETHS 290          
BLAST of FC917089 vs. ExPASy Swiss-Prot
Match: TPO4_YEAST (Polyamine transporter 4 OS=Saccharomyces cerevisiae GN=TPO4 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 7.199e-17
Identity = 59/192 (30.73%), Postives = 95/192 (49.48%), Query Frame = 3
Query:  354 YNWPSWKKWMYLCSVATIQIAMNYNTSVYPNAVAPLVEEFGITEQKARTGQMIYLIFYSFGCELWAPWSEEFGRWPILQLSETLINIFILPAALAN-NFGSILAGRALSGLSTAGG-SVTLGLIADLYEPDEQQWPLAFIVLASCIGTSIGGVIGGPIERFLHWRWNFWIQLIFNGGAQAIHFFMPESRATI 923
            +NW S KKW    + A + + +   +S+Y ++V  LVE + +++  A  G   YL+  S    + AP SE FGR P+   S  +  +F +   L+N +   IL  R LSG+  +   SV  G I D+++ D+    + + VL+  +G  +  ++ G       WRW+ WIQLI  G        MPE+   I
Sbjct:   84 HNWSSLKKWYTTMTSAFLCLVVTMGSSLYVSSVPELVERYHVSQTLALAGLTFYLLGLS--TVIGAPLSEVFGRKPVYLFSLPVSMLFTMGVGLSNGHMRIILPLRFLSGVFASPALSVGSGTILDIFDVDQVSVAMTYFVLSPFLGPVLSPIMAGFATEAKGWRWSEWIQLIAGGLILPFIALMPETHKGI 273          
BLAST of FC917089 vs. ExPASy Swiss-Prot
Match: TPO3_YEAST (Polyamine transporter 3 OS=Saccharomyces cerevisiae GN=TPO3 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 7.199e-17
Identity = 54/192 (28.12%), Postives = 98/192 (51.04%), Query Frame = 3
Query:  354 YNWPSWKKWMYLCSVATIQIAMNYNTSVYPNAVAPLVEEFGITEQKARTGQMIYLIFYSFGCELWAPWSEEFGRWPILQLSETLINIFILPAALANNFGSILAGRALSGL-STAGGSVTLGLIADLYEPDEQQWPLAFIVLASCIGTSIGGVIGGPIERFL-HWRWNFWIQLIFNGGAQAIHFFMPESRATI 923
            +NWP+W +W Y   ++ + I + Y ++     +  + +++ +  + A     + +I +S G  +W+P S+ +GR     +S  L  IF +P ALA N GS+LA R L G+ S++G  +  G IAD++  + +   +AF   A  +G  +G ++ G I          FW+ + F G    I   +PE+ A +
Sbjct:  171 HNWPAWIRWSYTVLLSILVICVAYGSACISGGLGTVEKKYHVGMEAAILSVSLMVIGFSLGPLIWSPVSDLYGRRVAYFVSMGLYVIFNIPCALAPNLGSLLACRFLCGVWSSSGLCLVGGSIADMFPSETRGKAIAFFAFAPYVGPVVGPLVNGFISVSTGRMDLIFWVNMAFAGVMWIISSAIPETYAPV 362          
BLAST of FC917089 vs. ExPASy Swiss-Prot
Match: TPO2_YEAST (Polyamine transporter 2 OS=Saccharomyces cerevisiae GN=TPO2 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 7.199e-17
Identity = 62/224 (27.68%), Postives = 108/224 (48.21%), Query Frame = 3
Query:  285 EKTNVRPD--GKRELTEEDAYDILA-------YNWPSWKKWMYLCSVATIQIAMNYNTSVYPNAVAPLVEEFGITEQKARTGQMIYLIFYSFGCELWAPWSEEFGRWPILQLSETLINIFILPAALANNFGSILAGRALSGL-STAGGSVTLGLIADLYEPDEQQWPLAFIVLASCIGTSIGGVIGGPIERFL-HWRWNFWIQLIFNGGAQAIHFFMPESRATI 923
            E+T  R D  G+ EL  E  +           +NWPSW +W Y   ++ + I + Y ++     +  + +++ +  + A     + +I +S G  +W+P S+ +GR     +S  L  IF +P ALA N G +LA R L G+ S++G  +  G IAD++  + +   +AF   A  +G  +G ++ G I          FW+ + F G    I   +PE+ A +
Sbjct:  130 EETEEREDQSGENELDPEIEFVTFVTGDPENPHNWPSWVRWSYTVLLSILVICVAYGSACISGGLGTVEKKYHVGMEAAILSCSLMVIGFSLGPLIWSPVSDLYGRRVAYFVSMGLYVIFNIPCALAPNLGCLLACRFLCGVWSSSGLCLVGGSIADMFPSETRGKAIAFFAFAPYVGPVVGPLVNGFISVSTGRMDLIFWVNMAFAGVMWIISSAIPETYAPV 353          
BLAST of FC917089 vs. ExPASy Swiss-Prot
Match: YLZ2_SCHPO (Uncharacterized transporter C750.02c/PB2B2.16c OS=Schizosaccharomyces pombe GN=SPAC750.02c PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 3.024e-15
Identity = 51/174 (29.31%), Postives = 85/174 (48.85%), Query Frame = 3
Query:  360 WPSWKKWMYLCSVATIQIAMNYNTSVYPNAVAPLVEEFGITEQKARTGQMIYLIFYSFGCELWAPWSEEFGRWPILQLSETLINIFILPAALANNFGSILAGRALSGL-STAGGSVTLGLIADLYEPDEQQWPLAFIVLASCIGTSIGGVIGGPI-ERFLHWRWNFWIQLIFNG 875
            WP   K   +  ++++     Y  SV+  +++ + E+F  +      G  +Y +   FG  ++AP SE+FGR PI  +  ++  +  +P AL+ N    L  R  SGL  + G S   G +ADL+E  ++   +        IG  I  +I G I +  + W+W FWI LI +G
Sbjct:   36 WPIRLKVRNVIVISSMTFLNQYGDSVFAPSISNIAEQFHASRTLVTLGATLYTLGILFGNLIFAPLSEQFGRRPIYLIGYSVFALLQIPIALSVNLAMFLVFRFFSGLFGSVGLSNGSGSLADLFEKKDRGKYMVIYFTVLSIGPGIAPIISGFISQSSIGWQWEFWILLILSG 209          
BLAST of FC917089 vs. ExPASy Swiss-Prot
Match: YI45_SCHPO (Uncharacterized transporter C1348.05 OS=Schizosaccharomyces pombe GN=SPBC1348.05 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 3.024e-15
Identity = 51/174 (29.31%), Postives = 85/174 (48.85%), Query Frame = 3
Query:  360 WPSWKKWMYLCSVATIQIAMNYNTSVYPNAVAPLVEEFGITEQKARTGQMIYLIFYSFGCELWAPWSEEFGRWPILQLSETLINIFILPAALANNFGSILAGRALSGL-STAGGSVTLGLIADLYEPDEQQWPLAFIVLASCIGTSIGGVIGGPI-ERFLHWRWNFWIQLIFNG 875
            WP   K   +  ++++     Y  SV+  +++ + E+F  +      G  +Y +   FG  ++AP SE+FGR PI  +  ++  +  +P AL+ N    L  R  SGL  + G S   G +ADL+E  ++   +        IG  I  +I G I +  + W+W FWI LI +G
Sbjct:   36 WPIRLKVRNVIVISSMTFLNQYGDSVFAPSISNIAEQFHASRTLVTLGATLYTLGILFGNLIFAPLSEQFGRRPIYLIGYSVFALLQIPIALSVNLAMFLVFRFFSGLFGSVGLSNGSGSLADLFEKKDRGKYMVIYFTVLSIGPGIAPIISGFISQSSIGWQWEFWILLILSG 209          
BLAST of FC917089 vs. ExPASy Swiss-Prot
Match: YAO5_SCHPO (Uncharacterized transporter C11D3.05 OS=Schizosaccharomyces pombe GN=SPAC11D3.05 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.560e-14
Identity = 53/193 (27.46%), Postives = 91/193 (47.15%), Query Frame = 3
Query:  357 NWPSWKKWMYLCSVATIQIAMNYNTSVYPNAVAPLVEEFGITEQKARTGQMIYLIFYSFGCELWAPWSEEFGRWPILQLSETLINIFILPAALANNFGSILAGRALSG------LSTAGGSVTLGLIADLYEPDEQQWPLAFIVLASCIGTSIGGVIGGPI-ERFLHWRWNFWIQLIFNGGAQAIHF-FMPES 911
            NW    KW  +  V+ I I + + +SVY + +  +  E   +   +  G   +L+ +  G   +AP S+ +GR+ I  ++  +  IF +    A+N  ++   R   G      L+ AGG+     I+DL+ P ++ + L        +G  IG +IG  I + +L WRW FWI +I+        F F PE+
Sbjct:   99 NWSHSYKWWIVIQVSVITIVVTFASSVYSSGIIDIASELHSSIPVSTLGSCTFLVGFGVGSLPFAPLSDIYGRFIIYFVTLLIFTIFQVGGGCAHNVWTLAIVRFFQGVFGSTPLANAGGT-----ISDLFTPVQRTYVLPGFCTFPYLGPIIGPIIGDFITQSYLEWRWTFWINMIWAAAVIVFVFIFFPET 286          
BLAST of FC917089 vs. ExPASy Swiss-Prot
Match: CAF5_SCHPO (Caffeine resistance protein 5 OS=Schizosaccharomyces pombe GN=caf5 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.344e-14
Identity = 49/189 (25.93%), Postives = 93/189 (49.21%), Query Frame = 3
Query:  357 NWPSWKKWMYLCSVATIQIAMNYNTSVYPNAVAPLVEEFGITEQKARTGQMIYLIFYSFGCELWAPWSE--EFGRWPILQLSETLINIFILPAALANNFGSILAGRALSGLSTAGGSVTLGL-IADLYEPDEQQWPLAFIVLASCIGTSIGGVIGGPIERFLHWRWNFWIQLIFNGGAQ-AIHFFMPES 911
            NWP W K +    +  +  A+   ++++   ++ + E   +       G  ++++ Y+ G  + +P SE  + GR  I  LS  +     +P AL ++ G +L  R L+G   +    T G  +AD+++P    + + F  + +  G  +G ++GG +     WRW FW+ ++ +G A   I FFMPE+
Sbjct:   76 NWPLWAKLVVTFDICFLTFAVYVGSAIFTPGISEMQETMHVGTVPVVLGLTLFVLGYAIGPLILSPLSEIPQVGRQKIYVLSLLVFVCLQIPTALGSSLGVLLPMRFLAGFFGSPALATGGATLADIWQPWLLPYFMCFWAIGAIGGPVLGPLLGGAMVVAESWRWQFWLLMMISGFALIVIFFFMPET 264          
BLAST of FC917089 vs. ExPASy Swiss-Prot
Match: YJA1_SCHPO (Uncharacterized transporter C1529.01 OS=Schizosaccharomyces pombe GN=SPCC1529.01 PE=2 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 5.704e-14
Identity = 50/175 (28.57%), Postives = 85/175 (48.57%), Query Frame = 3
Query:  357 NWPSWKKWMYLCSVATIQIAMNYNTSVYPNAVAPLVEEFGITEQKARTGQM-IYLIFYSFGCELWAPWSEEFGRWPILQLSETLINIFILPAALANNFGSILAGRALSGLSTAGG-SVTLGLIADLYEPDEQQWPLAFIVLASCIGTSIGGVIGGPIERFLHWRWNFWIQLIFNG 875
            NW   +KW  L  V+   +     +S+    +  + + F I     +   + IYL+ ++    + AP SE FGR  +LQ+   +  +F +   LA     +   R L+G  +A    +  G I+DL+ PDE+   +A + LA  +G +IG V+ G I  +  ++W FW   IF+G
Sbjct:   38 NWIYARKWTQLILVSAFALLGPMASSMVAPCLDQIADRFHIQNSTEKALILSIYLLVFAISPMISAPLSEVFGRRMLLQVGNVIFIVFNMACGLARTKAQMYIFRFLAGFGSATPMGLGSGTISDLFTPDERGKAVAVMSLAPLLGPTIGPVVSGFIAEYTTYKWIFWSTTIFSG 212          
The following BLAST results are available for this feature:
BLAST of FC917089 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
YN22_SCHPO3.817e-1827.46Uncharacterized transporter C530.02 OS=Schizosacch... [more]
YCT4_SCHPO3.231e-1727.85Uncharacterized transporter C794.04c OS=Schizosacc... [more]
TPO4_YEAST7.199e-1730.73Polyamine transporter 4 OS=Saccharomyces cerevisia... [more]
TPO3_YEAST7.199e-1728.13Polyamine transporter 3 OS=Saccharomyces cerevisia... [more]
TPO2_YEAST7.199e-1727.68Polyamine transporter 2 OS=Saccharomyces cerevisia... [more]
YLZ2_SCHPO3.024e-1529.31Uncharacterized transporter C750.02c/PB2B2.16c OS=... [more]
YI45_SCHPO3.024e-1529.31Uncharacterized transporter C1348.05 OS=Schizosacc... [more]
YAO5_SCHPO2.560e-1427.46Uncharacterized transporter C11D3.05 OS=Schizosacc... [more]
CAF5_SCHPO3.344e-1425.93Caffeine resistance protein 5 OS=Schizosaccharomyc... [more]
YJA1_SCHPO5.704e-1428.57Uncharacterized transporter C1529.01 OS=Schizosacc... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA83DD07RM1 IVIA1 Citrus clementina cDNA clone IC0AAA83DD07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC917089 ID=FC917089; Name=FC917089; organism=Citrus clementina; type=EST; length=925bp
CGCATTTGAAGACACACGCTGATTGAAGCGACGAGGACACGGTCCAGTCG
TACACCCACTTCCCATTGTTCAACGTCATGCTGTGGAGCAGGCCGTTCGA
TCAATAATAACCACGAGATGTCTCTCCATGGGCACCTTCCTTCTCTCCAT
TCGTCTCCTTTCTCCCCCAGACAATCAATATGGCGAACGACCAACAGGTT
CTCGGAGGGCCAGACCCCACTGGCAGCACCAGCGACTCCGACGACAAGAC
CATTACTCCTCCCAACGAGGCCAACACTCACAACGAGAAAACCAACGTGC
GCCCCGATGGCAAGCGCGAGTTGACGGAGGAAGATGCCTACGACATCCTC
GCCTACAACTGGCCGTCATGGAAGAAATGGATGTACCTTTGCTCCGTCGC
CACTATTCAGATTGCCATGAACTACAACACCTCTGTCTACCCTAATGCGG
TTGCACCTTTGGTCGAGGAGTTCGGCATCACCGAGCAGAAAGCTCGTACC
GGTCAGATGATCTACCTGATCTTCTACTCGTTCGGTTGCGAGTTGTGGGC
GCCATGGAGTGAGGAGTTCGGCCGCTGGCCTATCCTCCAGCTTTCGGAGA
CCCTCATCAACATTTTCATCCTTCCGGCCGCTCTGGCCAACAACTTTGGC
AGCATTCTTGCCGGTCGCGCATTGAGCGGTCTTTCTACTGCTGGTGGCAG
TGTCACCCTGGGTCTTATCGCCGATTTGTACGAGCCTGACGAGCAACAAT
GGCCTCTGGCTTTCATTGTCCTTGCGTCCTGTATCGGTACCAGTATCGGT
GGTGTCATCGGTGGTCCCATCGAAAGATTCCTTCACTGGCGTTGGAACTT
CTGGATCCAGCTCATCTTCAACGGTGGCGCGCAGGCGATCCATTTCTTCA
TGCCTGAAAGCCGTGCGACTATCAT
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