FC918249
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC918249 vs. ExPASy Swiss-Prot
Match: U497A_ARATH (UPF0497 membrane protein At2g36330 OS=Arabidopsis thaliana GN=At2g36330 PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 2.386e-21 Identity = 43/77 (55.84%), Postives = 61/77 (79.22%), Query Frame = 1 Query: 640 ILKRAKRDNTIKKSLLGFRVCGFVFSLVAFSVLAADKDRGWARDSFYRYKEFSYCLAVNVIVFVYSGFQSFDLAYRL 870 IL+R++R+ +K S LGFR+ V +L++FS++AADK +GW+ DSF RYKE+ +CL+VNV+ FVYS FQ+ DLAY L Sbjct: 122 ILRRSRREEVVKFSALGFRLSEVVLALISFSIMAADKTKGWSGDSFDRYKEYRFCLSVNVVAFVYSSFQACDLAYHL 198 HSP 2 Score: 25.7942 bits (55), Expect = 2.386e-21 Identity = 10/16 (62.50%), Postives = 14/16 (87.50%), Query Frame = 3 Query: 915 DFSLDQILTYLLLSAS 962 +F +DQ+L YLL+SAS Sbjct: 214 EFIIDQVLAYLLMSAS 229
BLAST of FC918249 vs. ExPASy Swiss-Prot
Match: U49A7_ARATH (UPF0497 membrane protein At5g40300 OS=Arabidopsis thaliana GN=At5g40300 PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.966e-20 Identity = 51/107 (47.66%), Postives = 69/107 (64.49%), Query Frame = 1 Query: 601 IGSARKILRTNLTILKRAKRDNT----IKKSLLGFRVCGFVFSLVAFSVLAADKDRGWARDSFYRYKEFSYCLAVNVIVFVYSGFQSFDLAYRLTAGHRKHGRILRY 909 + +R+ LR + + R++ I+K+LLGFRV FV LV+FSV+ +D+D+GWA DSFY YKEF +CLA NVI FVYSGF DL Y L+ R+ LR+ Sbjct: 92 VSESRRQLRPSFSSSSSTPRESKWASLIRKALLGFRVIAFVSCLVSFSVMVSDRDKGWAHDSFYNYKEFRFCLAANVIGFVYSGFMICDLVYLLSTSIRRSRHNLRH 198
BLAST of FC918249 vs. ExPASy Swiss-Prot
Match: U49D7_ARATH (UPF0497 membrane protein At5g62820 OS=Arabidopsis thaliana GN=At5g62820 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 2.214e-18 Identity = 42/111 (37.84%), Postives = 65/111 (58.56%), Query Frame = 1 Query: 529 KQPPPVKPHISSAAAPDTESAPSNIGSARKILRTNLTILKRAKRDNTIKKSLLGFRVCGFVFSLVAFSVLAADKDRGWARDSFYRYKEFSYCLAVNVIVFVYSGFQSFDLA 861 K P + H S ++ G+ + T + RA+ D+ + + LGFR+ + +++FS++AADK +GW+ DS+ RYKE+ YCLAVNVI FVYS F++ D A Sbjct: 99 KSPSSMVVHNSWVREDGGQTTTRKAGAPINGEESTRTTVNRARGDDLVSLTALGFRITEVILCVISFSIMAADKTQGWSGDSYDRYKEYRYCLAVNVIAFVYSAFEACDAA 209 HSP 2 Score: 26.9498 bits (58), Expect = 2.214e-18 Identity = 11/15 (73.33%), Postives = 14/15 (93.33%), Query Frame = 3 Query: 918 FSLDQILTYLLLSAS 962 FS+DQ+L YLL+SAS Sbjct: 229 FSMDQLLAYLLMSAS 243
BLAST of FC918249 vs. ExPASy Swiss-Prot
Match: U497G_MAIZE (UPF0497 membrane protein 16 OS=Zea mays PE=2 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 1.649e-14 Identity = 44/109 (40.37%), Postives = 59/109 (54.13%), Query Frame = 1 Query: 535 PPPVKPHISSAAAPDTESAPSNIGSARKILRTNLTILKRAKRDNTIKKSLLGFRVCGFVFSLVAFSVLAADKDRGWARDSFYRYKEFSYCLAVNVIVFVYSGFQSFDLA 861 PPP P S A AP + + SA +++ IL R +R ++++ L R L A +VLAAD RGWARDS+ Y +F Y AVNV+ F+YS FQ LA Sbjct: 114 PPPPPPAASPAPAPRAPPPHAQVRSADRVVPA---ILSRKRRAAVMQRAALLARAAAAGXXLAALTVLAADTRRGWARDSYSNYAQFRYSEAVNVVGFLYSVFQFVALA 219 HSP 2 Score: 27.335 bits (59), Expect = 1.649e-14 Identity = 10/16 (62.50%), Postives = 15/16 (93.75%), Query Frame = 3 Query: 915 DFSLDQILTYLLLSAS 962 DF++DQ+L YLL+S+S Sbjct: 238 DFTMDQVLAYLLISSS 253
BLAST of FC918249 vs. ExPASy Swiss-Prot
Match: U497F_MAIZE (UPF0497 membrane protein 15 OS=Zea mays PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 3.813e-13 Identity = 42/108 (38.89%), Postives = 58/108 (53.70%), Query Frame = 1 Query: 538 PPVKPHISSAAAPDTESAPSNIGSARKILRTNLTILKRAKRDNTIKKSLLGFRVCGFVFSLVAFSVLAADKDRGWARDSFYRYKEFSYCLAVNVIVFVYSGFQSFDLA 861 PP P S A AP + + SA +++ IL R +R ++++ L R L A +VLA+D RGWARDS+ Y +F Y AVNV+ F+YS FQ LA Sbjct: 111 PPPPPAASPAPAPRAPPPHAQVRSADRVVPA---ILSRKRRAAVMQRAALLARAAAAGLCLAALAVLASDTRRGWARDSYSNYAQFRYSEAVNVVGFLYSVFQFVALA 215 HSP 2 Score: 26.1794 bits (56), Expect = 3.813e-13 Identity = 9/16 (56.25%), Postives = 15/16 (93.75%), Query Frame = 3 Query: 915 DFSLDQILTYLLLSAS 962 DF++DQ++ YLL+S+S Sbjct: 234 DFTMDQVVAYLLISSS 249
BLAST of FC918249 vs. ExPASy Swiss-Prot
Match: U4975_SORBI (UPF0497 membrane protein Sb04g002820 OS=Sorghum bicolor GN=Sb04g002820 PE=3 SV=1) HSP 1 Score: 62.3882 bits (150), Expect = 6.669e-12 Identity = 44/118 (37.29%), Postives = 57/118 (48.31%), Query Frame = 1 Query: 535 PPPVKPHIS---------SAAAPDTESAPSNIGSA-----RKILRTNLTILKRAKRDNTIKKSLLGFRVCGFVFSLVAFSVLAADKDRGWARDSFYRYKEFSYCLAVNVIVFVYSGFQ 846 PPPV P SA AP P+ S+ R + IL R +R ++++ L R L A +VLAAD +GWARDS+ Y +F Y AVNVI F+YS FQ Sbjct: 243 PPPVPPSPPAPAQAPVPPSATAPAPAPVPAPRASSPHVQFRSADQVVPNILSRKRRAAAMQRTALLARGAAAGLCLAALAVLAADTRKGWARDSYSNYTQFRYSEAVNVIGFIYSVFQ 360 HSP 2 Score: 29.261 bits (64), Expect = 6.669e-12 Identity = 11/16 (68.75%), Postives = 16/16 (100.00%), Query Frame = 3 Query: 915 DFSLDQILTYLLLSAS 962 DF++DQ+LTYLL+S+S Sbjct: 384 DFTMDQVLTYLLISSS 399 The following BLAST results are available for this feature:
BLAST of FC918249 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC918249 ID=FC918249; Name=FC918249; organism=Citrus clementina; type=EST; length=963bpback to top |