FC920237
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920237 vs. ExPASy Swiss-Prot
Match: TIF6B_ARATH (Protein TIFY 6B OS=Arabidopsis thaliana GN=TIFY6B PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.336e-20 Identity = 83/228 (36.40%), Postives = 120/228 (52.63%), Query Frame = 3 Query: 6 KEPVIVVKEEVNNDVCKEIGFSKGSAIQWPFSNKVSAVP-QFMSFKVAQEDKNKKILSDHLGSSG-FMPFS-AEAYEHNQRRGMAEVQKSFDLDRRGGTHISLTAYSVPHEVHSVHCSHDIKTFPVSNQ---AIPVSINNPVFKNQ-FATIGQNMGGANVKQQFLGGIPVTSPH-TVLPTIGSFGGVHESWNNIKTRGSP-QLTIFYAGTVNVFEDISPEKAXAIMLL 662 K I VKEE + ++ ++G + W FSNKVSA QF+SF+ QED+++K + HL SG FMP S A+ Y+ ++ + VQ ++ FP SNQ VS++ P F++ +A G++ N Q L G+P+ +P ++LP GS G + ++ K GSP QLTIFYAG+V V++DISPEKA AIMLL Sbjct: 11 KNSPITVKEETSES-SRDSAPNRG--MNWSFSNKVSASSSQFLSFRPTQEDRHRKSGNYHLPHSGSFMPSSVADVYDSTRKAPYSSVQ-------------------------------GVRMFPNSNQHEETNAVSMSMPGFQSHHYAPGGRSFMNNNNNSQPLVGVPIMAPPISILPPPGSIVGTTDIRSSSKPIGSPAQLTIFYAGSVCVYDDISPEKAKAIMLL 204
BLAST of FC920237 vs. ExPASy Swiss-Prot
Match: TIF6A_ARATH (Protein TIFY 6A OS=Arabidopsis thaliana GN=TIFY6A PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.732e-15 Identity = 69/222 (31.08%), Postives = 97/222 (43.69%), Query Frame = 3 Query: 18 IVVKEEVNNDVCKEIGFSKGSAIQWPFSNKVSAVPQFMSFKVAQEDKNKKILSDHLGSSGFMPFSAEAYEHNQRRGMAEVQKSFDLDRRGGTHISLTAYSVPHEVHSVHCSHDIKTFPVSNQ----AIPVSINNPVFKNQFATIGQNMGGANVKQQFLGGIPVTSPHTVLPTIGSFGGVHESWNNIKTRGSP---QLTIFYAGTVNVFEDISPEKAXAIMLL 662 I VKEE N D G + W FS+KV + PQF+SF +Q++ ++DHL SS M + NQR + +Q+ + FP S+Q I VS++ P + N F + Q LGG P+ +P V + I++ P QLTIFYAG+V V++DI+PEKA AIMLL Sbjct: 15 ITVKEETNEDSAPSRGM-----MDWSFSSKVGSGPQFLSFGTSQQETRVNTVNDHLLSSAAM-------DQNQRTYFSSLQED-------------------------------RVFPGSSQQDQTTITVSMSEPNYINSF-----------INHQHLGGSPIMAPPV---------SVFPAPTTIRSSSKPLPPQLTIFYAGSVLVYQDIAPEKAQAIMLL 173 The following BLAST results are available for this feature:
BLAST of FC920237 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920237 ID=FC920237; Name=FC920237; organism=Citrus clementina; type=EST; length=663bpback to top |