FC920290
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920290 vs. ExPASy Swiss-Prot
Match: PGL1A_ARATH (PGR5-like protein 1A, chloroplastic OS=Arabidopsis thaliana GN=PGRL1A PE=1 SV=1) HSP 1 Score: 218.779 bits (556), Expect = 7.782e-57 Identity = 113/184 (61.41%), Postives = 140/184 (76.09%), Query Frame = 2 Query: 107 MASKVASGFTPQAQRVFAVPVQKPAAALVPFXXXXXXXXXXNTQFSGRQFSVRRRSFVLPSKATTDQQGQVEGDEVVDSKILQYCSIDKKEKKSLGELEQEFLQALQAFYYEGKAVMSNEEFDNLKEELMWEGSSVVMLSSAEQKFLEASMAYVAGKPIMSDEEYDKLKQKLKMDGSEIVVEGP 658 M SK+ T + R+F+ +KP+++ P G+ S+RRR F+LP+KATT+Q G V GD V DS +L YCSI+K EKK++GE+EQEFLQALQ+FYY+GKA+MSNEEFDNLKEELMWEGSSVVMLSS EQ+FLEASMAYV+G PI++DEEYDKLK KLK+DGS+IV EGP Sbjct: 1 MGSKMLFSLT--SPRLFSAVSRKPSSSFSPSPPSPSSRTQWTQLSPGKSISLRRRVFLLPAKATTEQSGPVGGDNV-DSNVLPYCSINKAEKKTIGEMEQEFLQALQSFYYDGKAIMSNEEFDNLKEELMWEGSSVVMLSSDEQRFLEASMAYVSGNPILNDEEYDKLKLKLKIDGSDIVSEGP 181 HSP 2 Score: 23.483 bits (49), Expect = 7.782e-57 Identity = 9/11 (81.82%), Postives = 11/11 (100.00%), Query Frame = 3 Query: 675 QKVYSDLSVDY 707 +KVYSDL+VDY Sbjct: 188 KKVYSDLAVDY 198
BLAST of FC920290 vs. ExPASy Swiss-Prot
Match: PGL1B_ARATH (PGR5-like protein 1B, chloroplastic OS=Arabidopsis thaliana GN=PGRL1B PE=1 SV=1) HSP 1 Score: 219.164 bits (557), Expect = 7.785e-57 Identity = 109/138 (78.99%), Postives = 124/138 (89.86%), Query Frame = 2 Query: 245 GRQFSVRRRSFVLPSKATTDQQGQVEGDEVVDSKILQYCSIDKKEKKSLGELEQEFLQALQAFYYEGKAVMSNEEFDNLKEELMWEGSSVVMLSSAEQKFLEASMAYVAGKPIMSDEEYDKLKQKLKMDGSEIVVEGP 658 GR S+RRR +LP KA+TDQ GQV G+EV DSKIL YCSI+K EK+++GE+EQEFLQA+Q+FYYEGKA+MSNEEFDNLKEELMWEGSSVVMLSS EQ+FLEASMAYV+G PI+SDEEYDKLK KLKMDGSEIV EGP Sbjct: 34 GRSISLRRRLTLLPLKASTDQSGQVGGEEV-DSKILPYCSINKNEKRTIGEMEQEFLQAMQSFYYEGKAIMSNEEFDNLKEELMWEGSSVVMLSSDEQRFLEASMAYVSGNPILSDEEYDKLKMKLKMDGSEIVCEGP 170 HSP 2 Score: 23.0978 bits (48), Expect = 7.785e-57 Identity = 8/11 (72.73%), Postives = 11/11 (100.00%), Query Frame = 3 Query: 675 QKVYSDLSVDY 707 +KVYSDL++DY Sbjct: 177 KKVYSDLAIDY 187 The following BLAST results are available for this feature:
BLAST of FC920290 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920290 ID=FC920290; Name=FC920290; organism=Citrus clementina; type=EST; length=707bpback to top |