FC920551
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920551 vs. ExPASy Swiss-Prot
Match: JP650_ARATH (Probable polygalacturonase non-catalytic subunit JP650 OS=Arabidopsis thaliana GN=JP650 PE=2 SV=2) HSP 1 Score: 218.009 bits (554), Expect = 4.046e-56 Identity = 103/186 (55.38%), Postives = 130/186 (69.89%), Query Frame = 1 Query: 154 GANTSGDVLKGKENPFSPKAYLMRYWDKTVSKNSPKPHFLLSKASPLNAVETATYSKLAEQKTLSSVLPSFCSSAKLFCFPDLSPSLEKHGADANFAVYENKNFTNYGTAGLGGVNSFKNYSEDGNVEVDSFRRYSRDSAGHNDKFSAYASHSNVVDDSFNTYXXXXXXXXXDFKSSTEKVTSRTS 711 G T G +ENPF+PKA L+RYW+K + SP+ FL+SKASPLNAV++AT+SKLA +L + P FCS+A LFCFPDL SLEKH D F+VY+ KNFTNYG A GG +SFKNYS+DGNV DSFRRYSR++AGH+DKF+ Y +SNVV++ FN+Y DF + V + TS Sbjct: 22 GGRTFGGGFSAEENPFTPKASLVRYWNKEIRGQSPRSEFLISKASPLNAVDSATFSKLAAANSLPTRFPDFCSAANLFCFPDLGASLEKHDDDVKFSVYDQKNFTNYGNARAGGADSFKNYSKDGNVVTDSFRRYSRNAAGHDDKFTVYGENSNVVEEGFNSYGTFGTGGAGDFTNYQNNVNNPTS 207
BLAST of FC920551 vs. ExPASy Swiss-Prot
Match: JP630_ARATH (Probable polygalacturonase non-catalytic subunit JP630 OS=Arabidopsis thaliana GN=JP630 PE=2 SV=2) HSP 1 Score: 211.46 bits (537), Expect = 3.787e-54 Identity = 101/191 (52.88%), Postives = 129/191 (67.54%), Query Frame = 1 Query: 139 VTLAGGANTSGDVLKGKENPFSPKAYLMRYWDKTVSKNSPKPHFLLSKASPLNAVETATYSKLAEQKTLSSVLPSFCSSAKLFCFPDLSPSLEKHGADANFAVYENKNFTNYGTAGLGGVNSFKNYSEDGNVEVDSFRRYSRDSAGHNDKFSAYASHSNVVDDSFNTYXXXXXXXXXDFKSSTEKVTSRTS 711 V +AGG + + NPF+PKA L+RYW+K + SP FLLSKASPL AV +AT++KLA + L LP FCS+A LFCFPDL P+LEKH D F+VY+ +NFTNYGT GG +SFK YS++GN DSFRRYSRD+AGH DKF+ YA +SNVV++ FN+Y DFK+ V + T+ Sbjct: 18 VVIAGGERLTNGGFSPEINPFTPKASLVRYWNKQIHHQSPGSAFLLSKASPLTAVASATFAKLASENALPDRLPDFCSAANLFCFPDLGPTLEKHSNDVKFSVYDQRNFTNYGTIHPGGADSFKKYSQNGNAVTDSFRRYSRDAAGHEDKFTGYADNSNVVEEKFNSYGTSATGGSGDFKNYQSGVNNPTT 208
BLAST of FC920551 vs. ExPASy Swiss-Prot
Match: Y639_ARATH (Probable polygalacturonase non-catalytic subunit At1g60390 OS=Arabidopsis thaliana GN=At1g60390 PE=2 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 2.377e-48 Identity = 95/169 (56.21%), Postives = 119/169 (70.41%), Query Frame = 1 Query: 139 VTLAGGANTSGDVLKGKENPFSPKAYLMRYWDKTVSKNSPKPHFLLSKASPLNAVETATYSKLAEQKTLSSVLPSFCSSAKLFCFPDLSP-SLEKHGADANFAVYENKNFTNYGTAGLGGVNSFKNYSEDGNVEVDSFRRYSRDSAGHNDKFSAYASHSNVVDDSFNTY 642 V AG T+G++ ENPF+PKA L+RYW+ ++ +SPKP F LSKASPL AV++ ++ LA L++ FCS+AKLFCFP+L+ SLEKHG D NFA Y KNFTNYG+ L G +SFKNYS N+ VDSFRRYSR+SAGH+D F+ YA NV D SF TY Sbjct: 21 VHFAGAKQTAGNITPS-ENPFTPKASLIRYWNNHINGDSPKPSFFLSKASPLTAVDSTRFASLASNHALNTHHSDFCSAAKLFCFPELAAHSLEKHGDDVNFAAYSGKNFTNYGSDRLSGADSFKNYSGGDNIAVDSFRRYSRNSAGHDDGFTNYAGEVNVADQSFTTY 188
BLAST of FC920551 vs. ExPASy Swiss-Prot
Match: GP1_SOLLC (Polygalacturonase-1 non-catalytic subunit beta OS=Solanum lycopersicum GN=GP1 PE=1 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 4.483e-47 Identity = 99/168 (58.93%), Postives = 118/168 (70.24%), Query Frame = 1 Query: 145 LAGGANTSGDVLKGKENPFSPKAYLMRYWDKTVSKNSPKPHFLLSKASPLNAVETATYSKL-AEQKTLSSVLPSFCSSAKLFCFPDLSPSLEKHGADANFAVYENKNFTNYGTAGLG-GVNSFKNYSEDGNVEVDSFRRYSRDSAGHNDKFSAYASHSNVVDDSFNTY 642 + GG SG NPF+PK YL+RYW K +S + PKP FLL+KASPLNA + ATY+KL A+Q L++ L +FCSSA L C PDLSPSLEKH D +FA Y +KNFTNYGT G GVN+FKNYSE N+ V+SFRRY R S N KF YAS NV+D SFN+Y Sbjct: 25 VVGGDGESG-------NPFTPKGYLIRYWKKQISNDLPKPWFLLNKASPLNAAQYATYTKLVADQNALTTQLHTFCSSANLMCAPDLSPSLEKHSGDIHFATYSDKNFTNYGTNEPGIGVNTFKNYSEGENIPVNSFRRYGRGSPRDN-KFDNYASDGNVIDQSFNSY 184
BLAST of FC920551 vs. ExPASy Swiss-Prot
Match: GP2_SOLLC (Polygalacturonase non-catalytic subunit AroGP2 OS=Solanum lycopersicum GN=GP2 PE=3 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 1.595e-44 Identity = 95/152 (62.50%), Postives = 111/152 (73.03%), Query Frame = 1 Query: 193 NPFSPKAYLMRYWDKTVSKNSPKPHFLLSKASPLNAVETATYSKL-AEQKTLSSVLPSFCSSAKLFCFPDLSPSLEKHGADANFAVYENKNFTNYGTAGLG-GVNSFKNYSEDGNVEVDSFRRYSRDSAGHNDKFSAYASHSNVVDDSFNTY 642 NPF+PK Y++RYW+K VS + PKP FLL+KASPLNA + ATY+KL A+Q LS+ L SFCSSA L C PDL PSLEKH D +F Y NKNFTNYGT G GVN+FKNYSED + V+SFRRY R S N KF YA NV+D SFN+Y Sbjct: 35 NPFTPKGYVIRYWNKHVSNDLPKPWFLLNKASPLNAAQYATYTKLVADQNALSTHLQSFCSSANLMCAPDLLPSLEKHTGDIHFTTYGNKNFTNYGTNEPGIGVNTFKNYSEDAS--VNSFRRYGRGSPRDN-KFDNYAPDGNVIDQSFNSY 183
BLAST of FC920551 vs. ExPASy Swiss-Prot
Match: GP3_SOLLC (Polygalacturonase non-catalytic subunit AroGP3 OS=Solanum lycopersicum GN=GP3 PE=3 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 1.070e-40 Identity = 93/168 (55.36%), Postives = 115/168 (68.45%), Query Frame = 1 Query: 163 TSGDVLKGKE-----NPFSPKAYLMRYWDKTVSKNSPKPHFLLSKASPLNAVETATYSKL-AEQKTLSSVLPSFCSSAKLFCFPDLSPSLEKHGADANFAVYENKNFTNYGTAGLG-GVNSFKNYSEDGNVEVDSFRRYSRDSAGHNDKFSAY-ASHSNVVDDSFNTY 642 +S DV+ K+ NPF+PK YL+RYW+K VS + PKP FLL+KASPLNA + ATY+KL A+Q ++ L SFCSSA L C DL PSLEKH D +F Y +KNFTNYGT G G NSFKNY+E+ N V+SFRRY RDS H+++F Y A N SFN+Y Sbjct: 20 SSLDVVVAKDGDESGNPFTPKGYLIRYWNKHVSNDLPKPWFLLNKASPLNAAQYATYTKLVADQNAFTTHLQSFCSSANLMCALDLLPSLEKHKGDVHFVSYGDKNFTNYGTKESGLGFNSFKNYTEEENFPVNSFRRYGRDSP-HDNQFDNYGAPGGNTPVQSFNSY 186
BLAST of FC920551 vs. ExPASy Swiss-Prot
Match: BURPC_ORYSJ (BURP domain-containing protein 12 OS=Oryza sativa subsp. japonica GN=BURP12 PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 7.442e-26 Identity = 64/157 (40.76%), Postives = 86/157 (54.78%), Query Frame = 1 Query: 193 NPFSPKAYLMRYWDKTVSKNSPKPHFLLSKASPLNAVETATYSKLAEQKTLSSVLPSFCSSAKLFCFPDLSPS-------LEKHGADANFAVYENKNFTNYGTAGLGGVNSFKNYSEDGNVEVDSFRRYSRDSAGHNDKFSAYASHSNVVDDSFNTY 642 NPF+ KA +RYW++ V N P P F ++K SPL A + A+++ L +LP C+ A L C P S + + G F Y N NFTNYG+ G+GG + F YS D NV DSFRRY RDS D F++Y + NVV +F +Y Sbjct: 29 NPFTAKAAFIRYWNRRVPNNRPHPAFFVAKLSPLQAADAASFAA-----ALPRLLPPLCARAALLC-PSASDTETAASLAVGGGGGGGPFKGYSNANFTNYGSGGVGGADGFSAYSPDLNVVGDSFRRYGRDSTRRVDTFASYEAEGNVVTANFTSY 179
BLAST of FC920551 vs. ExPASy Swiss-Prot
Match: BURPE_ORYSJ (BURP domain-containing protein 14 OS=Oryza sativa subsp. japonica GN=BURP14 PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.647e-23 Identity = 65/182 (35.71%), Postives = 88/182 (48.35%), Query Frame = 1 Query: 193 NPFSPKAYLMRYWDKTVSKNSPKPHFLLSKASPLNAVETATYSKLAEQKTLSSVLPSFCSSAKLFCFPDLSPSLEKHGAD-------------------------ANFAVYENKNFTNYGTAGLGGVNSFKNYSE-------DGNVEVDSFRRYSRDSAGHNDKFSAYASHSNVVDDSFNTY 642 +PF+ KA +RYW++ V N P P F +K SPL+A + A +S LA L S + +FC++A L C S K +D A F YEN NF++YG +G GG + F YS G VDSFRRY + S G ND F++Y + NV SF +Y Sbjct: 64 SPFTAKAAFVRYWNRKVHSNRPHPAFFFAKLSPLSAPDAAAFSTLAAAGQLGSRIRAFCAAASLLCPTTPGSSWSKSSSDGDGAAAAAAPAGGGGGGGGGGDGGAAPFKNYENGNFSSYGNSGGGGADQFAVYSSGQSNGGGGGGGGVDSFRRYGKGSQGRNDSFTSYEAGGNVGTSSFTSY 245 The following BLAST results are available for this feature:
BLAST of FC920551 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920551 ID=FC920551; Name=FC920551; organism=Citrus clementina; type=EST; length=721bpback to top |