FC920571
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920571 vs. ExPASy Swiss-Prot
Match: RS6_ASPOF (40S ribosomal protein S6 OS=Asparagus officinalis GN=rps6 PE=2 SV=1) HSP 1 Score: 354.755 bits (909), Expect = 2.791e-97 Identity = 177/209 (84.69%), Postives = 185/209 (88.52%), Query Frame = 3 Query: 75 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKTGKKVSKAPKIQRLVTPLTLQRKRARIAEKEQKIARPKQK 701 MKFNIANPTTGCQKKLEIDDDQKLRAF+DKRISQEVSGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCF CIVSPDLSVLNLVIVKKGE+DLPGLTD EKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFT K GK SKAPKIQRLVTPLTLQRKRARIAEK++++A+ K + Sbjct: 1 MKFNIANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGENDLPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTNKKGKTCSKAPKIQRLVTPLTLQRKRARIAEKKKRVAKAKSE 209
BLAST of FC920571 vs. ExPASy Swiss-Prot
Match: RS62_ARATH (40S ribosomal protein S6-2 OS=Arabidopsis thaliana GN=RPS6B PE=1 SV=3) HSP 1 Score: 353.214 bits (905), Expect = 8.122e-97 Identity = 176/205 (85.85%), Postives = 183/205 (89.27%), Query Frame = 3 Query: 75 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKTGKKVSKAPKIQRLVTPLTLQRKRARIAEKEQKIAR 689 MKFN+ANPTTGCQKKLEIDDDQKLRAFFDKR+SQEVSGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCF CIVSPDLSVLNLVIVKKG DLPGLTDTEKPRMRGPKRASKIRKLFNL KEDDVRKYVNTYRRTFT K GKKVSKAPKIQRLVTPLTLQRKRARIA+K+++IA+ Sbjct: 1 MKFNVANPTTGCQKKLEIDDDQKLRAFFDKRLSQEVSGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGVSDLPGLTDTEKPRMRGPKRASKIRKLFNLGKEDDVRKYVNTYRRTFTNKKGKKVSKAPKIQRLVTPLTLQRKRARIADKKKRIAK 205
BLAST of FC920571 vs. ExPASy Swiss-Prot
Match: RS61_ARATH (40S ribosomal protein S6-1 OS=Arabidopsis thaliana GN=RPS6A PE=1 SV=2) HSP 1 Score: 348.977 bits (894), Expect = 1.532e-95 Identity = 174/205 (84.88%), Postives = 182/205 (88.78%), Query Frame = 3 Query: 75 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKTGKKVSKAPKIQRLVTPLTLQRKRARIAEKEQKIAR 689 MKFN+ANPTTGCQKKLEIDDDQKLRAF+DKRISQEVSGDALGEEFKGYVFKI GGCDKQGFPMKQGVLTPGRVRLLLHRGTPCF CIVSPDLSVLNLVIVKKGE+DLPGLTDTEKPRMRGPKRASKIRKLFNL KEDDVR YVNTYRR FT K GK+VSKAPKIQRLVTPLTLQRKRARIA+K++KIA+ Sbjct: 1 MKFNVANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIKGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGENDLPGLTDTEKPRMRGPKRASKIRKLFNLKKEDDVRTYVNTYRRKFTNKKGKEVSKAPKIQRLVTPLTLQRKRARIADKKKKIAK 205
BLAST of FC920571 vs. ExPASy Swiss-Prot
Match: RS6_APLCA (40S ribosomal protein S6 OS=Aplysia californica GN=RPS6 PE=2 SV=1) HSP 1 Score: 237.269 bits (604), Expect = 6.495e-62 Identity = 126/209 (60.29%), Postives = 153/209 (73.21%), Query Frame = 3 Query: 75 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKTGKKV-SKAPKIQRLVTPLTLQRKRARIAEKEQKIARPKQ 698 MK NI+ P TGCQK +E+DD++KLR F+DKRIS E+S D LG+E+KGYV +I GG DKQGFPMKQGVLT RVRLLL + C+ CIV +LSVL+LVI+KKGE D+PGLTD PR GPKRASKIRKLFNLSKEDDVR+YV RR + GKK SKAPKIQRLVTP+ LQRKRAR+A K++++ + ++ Sbjct: 1 MKLNISYPATGCQKLIEVDDEKKLRPFYDKRISAELSADCLGDEWKGYVVRISGGNDKQGFPMKQGVLTATRVRLLLDKNHSCY--RPRRTGERKRKSVRGCIVDSNLSVLSLVIIKKGEQDIPGLTDKTIPRRLGPKRASKIRKLFNLSKEDDVRQYV--VRRPLPERDGKKAKSKAPKIQRLVTPVVLQRKRARMALKKKRVTKKRE 205
BLAST of FC920571 vs. ExPASy Swiss-Prot
Match: RS6_RAT (40S ribosomal protein S6 OS=Rattus norvegicus GN=Rps6 PE=1 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 8.483e-62 Identity = 126/209 (60.29%), Postives = 152/209 (72.73%), Query Frame = 3 Query: 75 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKTGKKVSKAPKIQRLVTPLTLQRKRARIAEKEQKIARPKQK 701 MK NI+ P TGCQK +E+DD++KLR F++KR++ EV+ DALGEE+KGYV +I GG DKQGFPMKQGVLT GRVRLLL +G C+ CIV +LSVLNLVIVKKGE D+PGLTDT PR GPKRAS+IRKLFNLSKEDDVR+YV R+ + K +KAPKIQRLVTP LQ KR RIA K+Q+ + K++ Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQGFPMKQGVLTHGRVRLLLSKGHSCY--RPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV--VRKPLNKEGKKPRTKAPKIQRLVTPRVLQHKRRRIALKKQRTKKNKEE 205
BLAST of FC920571 vs. ExPASy Swiss-Prot
Match: RS6_MOUSE (40S ribosomal protein S6 OS=Mus musculus GN=Rps6 PE=1 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 8.483e-62 Identity = 126/209 (60.29%), Postives = 152/209 (72.73%), Query Frame = 3 Query: 75 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKTGKKVSKAPKIQRLVTPLTLQRKRARIAEKEQKIARPKQK 701 MK NI+ P TGCQK +E+DD++KLR F++KR++ EV+ DALGEE+KGYV +I GG DKQGFPMKQGVLT GRVRLLL +G C+ CIV +LSVLNLVIVKKGE D+PGLTDT PR GPKRAS+IRKLFNLSKEDDVR+YV R+ + K +KAPKIQRLVTP LQ KR RIA K+Q+ + K++ Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQGFPMKQGVLTHGRVRLLLSKGHSCY--RPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV--VRKPLNKEGKKPRTKAPKIQRLVTPRVLQHKRRRIALKKQRTKKNKEE 205
BLAST of FC920571 vs. ExPASy Swiss-Prot
Match: RS6_MACFA (40S ribosomal protein S6 OS=Macaca fascicularis GN=RPS6 PE=2 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 8.483e-62 Identity = 126/209 (60.29%), Postives = 152/209 (72.73%), Query Frame = 3 Query: 75 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKTGKKVSKAPKIQRLVTPLTLQRKRARIAEKEQKIARPKQK 701 MK NI+ P TGCQK +E+DD++KLR F++KR++ EV+ DALGEE+KGYV +I GG DKQGFPMKQGVLT GRVRLLL +G C+ CIV +LSVLNLVIVKKGE D+PGLTDT PR GPKRAS+IRKLFNLSKEDDVR+YV R+ + K +KAPKIQRLVTP LQ KR RIA K+Q+ + K++ Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQGFPMKQGVLTHGRVRLLLSKGHSCY--RPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV--VRKPLNKEGKKPRTKAPKIQRLVTPRVLQHKRRRIALKKQRTKKNKEE 205
BLAST of FC920571 vs. ExPASy Swiss-Prot
Match: RS6_HUMAN (40S ribosomal protein S6 OS=Homo sapiens GN=RPS6 PE=1 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 8.483e-62 Identity = 126/209 (60.29%), Postives = 152/209 (72.73%), Query Frame = 3 Query: 75 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKTGKKVSKAPKIQRLVTPLTLQRKRARIAEKEQKIARPKQK 701 MK NI+ P TGCQK +E+DD++KLR F++KR++ EV+ DALGEE+KGYV +I GG DKQGFPMKQGVLT GRVRLLL +G C+ CIV +LSVLNLVIVKKGE D+PGLTDT PR GPKRAS+IRKLFNLSKEDDVR+YV R+ + K +KAPKIQRLVTP LQ KR RIA K+Q+ + K++ Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQGFPMKQGVLTHGRVRLLLSKGHSCY--RPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV--VRKPLNKEGKKPRTKAPKIQRLVTPRVLQHKRRRIALKKQRTKKNKEE 205
BLAST of FC920571 vs. ExPASy Swiss-Prot
Match: RS6_BOVIN (40S ribosomal protein S6 OS=Bos taurus GN=RPS6 PE=2 SV=1) HSP 1 Score: 236.498 bits (602), Expect = 1.108e-61 Identity = 129/210 (61.43%), Postives = 153/210 (72.86%), Query Frame = 3 Query: 75 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKTGKKV-SKAPKIQRLVTPLTLQRKRARIAEKEQKIARPKQK 701 MK NI+ P TGCQK +E+DD++KLR F++KR++ EV+ DALGEE+KGYV +I GG DKQGFPMKQGVLT GRVRLLL +G C+ CIV +LSVLNLVIVKKGE D+PGLTDT PR GPKRAS+IRKLFNLSKEDDVR+YV R K GKK +KAPKIQRLVTP LQ KR RIA K+Q+ + K++ Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQGFPMKQGVLTHGRVRLLLSKGHSCY--RPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV---VRKPLNKDGKKPRTKAPKIQRLVTPRVLQHKRRRIALKKQRTKKNKEE 205
BLAST of FC920571 vs. ExPASy Swiss-Prot
Match: RS6_ICTPU (40S ribosomal protein S6 OS=Ictalurus punctatus GN=rps6 PE=2 SV=1) HSP 1 Score: 232.646 bits (592), Expect = 1.600e-60 Identity = 123/209 (58.85%), Postives = 150/209 (71.77%), Query Frame = 3 Query: 75 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKTGKKVSKAPKIQRLVTPLTLQRKRARIAEKEQKIARPKQK 701 MK NI+ P TGCQK +E+DD++KLR F++KR++ EV+ D LG+E+KGYV +I GG DKQGFPMKQGVLT GRVRLLL +G C+ CIV +LSVLNLVI++KGE D+PGLTD+ PR GPKRAS+IRKLFNLSKEDDVR+YV RR T + K +KAPKIQRLVTP LQ KR RIA K Q+ + K + Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADPLGDEWKGYVVRISGGNDKQGFPMKQGVLTNGRVRLLLSKGHSCY--RPRRTGERKRKSVRGCIVDANLSVLNLVIIRKGEKDIPGLTDSTVPRRLGPKRASRIRKLFNLSKEDDVRQYV--VRRPLTKEGKKPRTKAPKIQRLVTPRVLQHKRRRIALKRQRTQKNKDE 205 The following BLAST results are available for this feature:
BLAST of FC920571 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920571 ID=FC920571; Name=FC920571; organism=Citrus clementina; type=EST; length=726bpback to top |