FC920582
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920582 vs. ExPASy Swiss-Prot
Match: FABG1_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 1, chloroplastic OS=Brassica napus GN=gbkr1 PE=1 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 2.442e-46 Identity = 96/165 (58.18%), Postives = 123/165 (74.55%), Query Frame = 3 Query: 129 LMAAVAGSNIVAFKSAATSAKFGDRKIPQFRQWSPVQVKALPRPSVELKSRWNSSFPSSGIRAQVATIEQATNEAVQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILIN 623 + VA + + + K+ K G R+I Q RQWSP+Q A+P + S S+ ++AQ +EQ+T EAV VE+PV VVTGASRGIG+A+A SLGKAGCKVLVNYARS+KEAEEV K+IEA GGQA+TFGGDVSKEADVE+M+KTA+DAWGT+D+++N Sbjct: 1 MATTVAATKLTSLKAVK---KLGFREIRQVRQWSPLQ-SAMPHFGMLRCGSRQSFATSTVVKAQATAVEQSTGEAVPKVESPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKEAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTIDVVVN 161
BLAST of FC920582 vs. ExPASy Swiss-Prot
Match: FABG3_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 3, chloroplastic OS=Brassica napus GN=bkr3 PE=2 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 4.606e-45 Identity = 96/165 (58.18%), Postives = 124/165 (75.15%), Query Frame = 3 Query: 129 LMAAVAGSNIVAFKSAATSAKFGDRKIPQFRQWSPVQVKALPRPSVELKSRWNSSFPSSGIRAQVATIEQATNEAVQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILIN 623 + VA + + + K+ K G R+I Q RQW+P+Q ++P SR S S+ ++AQ +EQ+T EAV VE+PV VVTGASRGIG+A+A SLGKAGCKVLVNYARS+KEAEEV K+IEA GGQA+TFGGDVSKEADVE+M+KTA+DAWGT+D+++N Sbjct: 1 MATTVAATKLTSLKAVK---KLGFREIRQVRQWTPLQ-SSMPH----FGSR-QSFATSTVVKAQATAVEQSTGEAVPKVESPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKEAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTIDVVVN 156
BLAST of FC920582 vs. ExPASy Swiss-Prot
Match: FABG_CUPLA (3-oxoacyl-[acyl-carrier-protein] reductase, chloroplastic OS=Cuphea lanceolata GN=CLKR27 PE=2 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.134e-43 Identity = 103/164 (62.80%), Postives = 117/164 (71.34%), Query Frame = 3 Query: 135 AAVAG-SNIVAFKSAATSAKFGDRKIPQFRQWSPVQVKALPRPSVELKSRWNSSFPSSGIRAQVATIEQATNEAVQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILIN 623 A AG S VA KS G R++ +Q SPV + S +SGIRAQVAT E+ + A Q+VE+PV +VTGASRGIG+A+A SLGKAGCKVLVNYARSSKEAEEV KEIEA GGQALTFGGDVSKE DVE+MIKTAVDAWGTVDIL+N Sbjct: 4 ATAAGCSGAVALKS------LGGRRLCIPQQLSPVLAGFGSHAAKSFPILSTRSIATSGIRAQVATAEKVSAGAGQSVESPVVIVTGASRGIGKAIALSLGKAGCKVLVNYARSSKEAEEVSKEIEAFGGQALTFGGDVSKEEDVEAMIKTAVDAWGTVDILVN 161
BLAST of FC920582 vs. ExPASy Swiss-Prot
Match: FABG5_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 5, chloroplastic (Fragment) OS=Brassica napus GN=bkr1 PE=2 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 4.311e-43 Identity = 92/161 (57.14%), Postives = 117/161 (72.67%), Query Frame = 3 Query: 141 VAGSNIVAFKSAATSAKFGDRKIPQFRQWSPVQVKALPRPSVELKSRWNSSFPSSGIRAQVATIEQATNEAVQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILIN 623 VA + + + K AT+ K G R+I Q RQW+P++ P + S+ + +AQ EQ T EAV VE+PV VVTGASRGIG+A+A SLGKAGCKVLVNYARS+KEAEEV K+IE GG+A+TFGGDVSKEADV+SM+KTAVD WGT+D+++N Sbjct: 3 VAATKLTSLK--ATAGKLGYREICQVRQWAPLKSAM---PHFGMLRCATSTVVKAQAQAQATATEQTTEEAVPKVESPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKEAEEVSKQIEEYGGEAITFGGDVSKEADVDSMMKTAVDKWGTIDVVVN 158
BLAST of FC920582 vs. ExPASy Swiss-Prot
Match: FABG_ARATH (3-oxoacyl-[acyl-carrier-protein] reductase, chloroplastic OS=Arabidopsis thaliana GN=At1g24360 PE=2 SV=2) HSP 1 Score: 174.096 bits (440), Expect = 5.630e-43 Identity = 90/165 (54.55%), Postives = 121/165 (73.33%), Query Frame = 3 Query: 129 LMAAVAGSNIVAFKSAATSAKFGDRKIPQFRQWSPVQVKALPRPSVELKSRWNSSFPSSGIRAQVATIEQATNEAVQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILIN 623 + AAVA +++ K+ A K G R+I Q RQ +P+ A+P + L+ R F +S ++AQ EQ+ E VQ VE+PV V+TGASRGIG+A+A +LGKAGCKVLVNYARS+KEAEEV K+IE GGQA+TFGGDVSK DV++M+KTA+D WGT+D+++N Sbjct: 1 MAAAVAAPRLISLKAVA---KLGFREISQIRQLAPLH-SAIPHFGM-LRCRSRQPFSTSVVKAQATATEQSPGEVVQKVESPVVVITGASRGIGKAIALALGKAGCKVLVNYARSAKEAEEVAKQIEEYGGQAITFGGDVSKATDVDAMMKTALDKWGTIDVVVN 160
BLAST of FC920582 vs. ExPASy Swiss-Prot
Match: FABG2_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 2, chloroplastic OS=Brassica napus GN=bkr2 PE=2 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 1.638e-42 Identity = 95/167 (56.89%), Postives = 121/167 (72.46%), Query Frame = 3 Query: 138 AVAGSNIVAFKSAATSAKFGDRKIPQFRQWSPVQVKALPRPSVELKSRWNSSFPSSGI---RAQVATIEQATNE--AVQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILIN 623 ++AG + + K+AA K G R+I RQW+PV + SR + SS + +AQ EQ+T E AV VE+PV VVTGASRGIG+A+A SLGKAGCKVLVNYARS+KEAE+V K+IEA GGQA+TFGGDVSKEADV++M+KTAVDAWGT+D+++N Sbjct: 5 SIAGPRLTSLKTAA--GKLGYREICHVRQWAPVHSPMPHFGMLRCGSRRPFATSSSTVVQAQAQATAAEQSTGEEEAVPKVESPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKEAEQVSKQIEAYGGQAITFGGDVSKEADVDAMMKTAVDAWGTIDVVVN 169
BLAST of FC920582 vs. ExPASy Swiss-Prot
Match: FABG4_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 4 (Fragment) OS=Brassica napus GN=bkr4 PE=2 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 1.939e-35 Identity = 71/92 (77.17%), Postives = 84/92 (91.30%), Query Frame = 3 Query: 348 EAVQNVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILIN 623 EAV VE+PV VVTGASRGIG+A+A SLGKAGCKVLVNYARS+KEAEEV K+IE GGQA+TFGGDVSKEADV++M+KTAVD WGT+D+++N Sbjct: 7 EAVPKVESPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKEAEEVSKQIEEYGGQAITFGGDVSKEADVDAMMKTAVDKWGTIDVVVN 98
BLAST of FC920582 vs. ExPASy Swiss-Prot
Match: DHG2_BACME (Glucose 1-dehydrogenase 2 OS=Bacillus megaterium GN=gdhII PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.111e-17 Identity = 43/83 (51.81%), Postives = 62/83 (74.70%), Query Frame = 3 Query: 375 VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILIN 623 V VVTG S+G+GRA+A G+ KV+VNY + +EA EV KEIE +GGQA+ GDV+KE DV ++++TAV +G++D++IN Sbjct: 9 VVVVTGGSKGLGRAMAVRFGQEQSKVVVNYRSNEEEALEVKKEIEEAGGQAIIVRGDVTKEEDVVNLVETAVKEFGSLDVMIN 91
BLAST of FC920582 vs. ExPASy Swiss-Prot
Match: YUSS_BACSU (Short-chain dehydrogenase/reductase homolog yusS OS=Bacillus subtilis GN=yusS PE=5 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.182e-16 Identity = 44/88 (50.00%), Postives = 57/88 (64.77%), Query Frame = 3 Query: 360 NVEAPVAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILIN 623 NV +A+VTG GIG+A + L K G V VNY+RS EAEE + I+ +GGQA DVSK +DV+ MI+ V+ GTVDIL+N Sbjct: 2 NVLNKIALVTGGGTGIGKAASMELAKRGAIVAVNYSRSQSEAEETVEMIQKAGGQAFAIQADVSKNSDVQDMIQAIVNTHGTVDILVN 89
BLAST of FC920582 vs. ExPASy Swiss-Prot
Match: DHGA_BACME (Glucose 1-dehydrogenase A OS=Bacillus megaterium GN=gdhA PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.439e-16 Identity = 38/83 (45.78%), Postives = 60/83 (72.29%), Query Frame = 3 Query: 375 VAVVTGASRGIGRAVATSLGKAGCKVLVNYARSSKEAEEVCKEIEASGGQALTFGGDVSKEADVESMIKTAVDAWGTVDILIN 623 V V+TG S G+GRA+A G+ KV++NY + +EA + KE+E +GGQA+ GDV+KE DV ++++TA+ +GT+D++IN Sbjct: 9 VVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVEEAGGQAIIVQGDVTKEEDVVNLVQTAIKEFGTLDVMIN 91 The following BLAST results are available for this feature:
BLAST of FC920582 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920582 ID=FC920582; Name=FC920582; organism=Citrus clementina; type=EST; length=654bpback to top |