FC920731
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920731 vs. ExPASy Swiss-Prot
Match: YH75_SCHPO (Vesicle-associated membrane protein-associated protein C16G5.05c OS=Schizosaccharomyces pombe GN=SPBC16G5.05c PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.801e-14 Identity = 48/133 (36.09%), Postives = 72/133 (54.14%), Query Frame = 2 Query: 263 LQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSTCDVIVTMQSQKEAP-PDMQCKDKFLLQGVVASPGATAK-----DITPEMFNREAGHHVEECKLRVLYVAPPRPPSPVHEGSEEGSSPRASVSDNGN 643 + + N V FKVKTT PK YCVRPN+G + P+ST +V V +Q+ KE P PD +C+DKFL+Q + T+ + EM + G + + K+R +Y + +PP + E S+ VS G+ Sbjct: 23 ISVHNPNPEPVIFKVKTTAPKHYCVRPNSGKIEPKSTVNVQVLLQAMKEEPAPDFKCRDKFLIQSMAIGDADTSNVENYHEFWTEM--EKQGRSIFDRKIRCVY-STKQPPQSADKQVENTSTSNPPVSVEGS 152
BLAST of FC920731 vs. ExPASy Swiss-Prot
Match: YDFC_SCHPO (Uncharacterized protein C17C9.12 OS=Schizosaccharomyces pombe GN=SPAC17C9.12 PE=1 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 1.992e-13 Identity = 42/115 (36.52%), Postives = 61/115 (53.04%), Query Frame = 2 Query: 227 FPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSTCDVIVTMQSQKEAP-PDMQCKDKFLLQGVVASPGATAKDITPEMFNREAGHHVEECKLRVLYVAPP 568 FP L + + C L+L N + FKVKTT PK+YCVRPN G + S V V +Q P P +C+DKFL+Q P DI +++ + + ++ E K+R +Y P Sbjct: 11 FPRPLTRLVKCDLELRNTAPYPIGFKVKTTAPKQYCVRPNGGRIEANSAVSVEVILQPLDHEPAPGTKCRDKFLVQSTELKPELQGMDIA-DIWTQVSKANISERKIRCVYSEGP 124
BLAST of FC920731 vs. ExPASy Swiss-Prot
Match: VAPB_RAT (Vesicle-associated membrane protein-associated protein B OS=Rattus norvegicus GN=Vapb PE=1 SV=3) HSP 1 Score: 73.559 bits (179), Expect = 1.291e-12 Identity = 44/136 (32.35%), Postives = 75/136 (55.15%), Query Frame = 2 Query: 179 MMSTGELLNIEPQ-ELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSTCDVIVTMQSQKEAPPDMQCKDKFLLQGVVASPGATAKDITPEMFNREAGHHVEECKLRVLYVAPPRPPSP 583 M ++L++EPQ EL+F ++ +L+L N TD V FKVKTT P++YCVRPN+GV+ ++ +V V +Q + P+ + K KF++Q + A P + + ++ + + KLR ++ P P Sbjct: 1 MAKVEQVLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGVIDAGASLNVSVMLQ-PFDYDPNEKSKHKFMVQSMFAPPDTSDME---AVWKEAKPEDLMDSKLRCVFELPAENAKP 132
BLAST of FC920731 vs. ExPASy Swiss-Prot
Match: VAPB_MOUSE (Vesicle-associated membrane protein-associated protein B OS=Mus musculus GN=Vapb PE=2 SV=3) HSP 1 Score: 73.1738 bits (178), Expect = 1.686e-12 Identity = 44/136 (32.35%), Postives = 75/136 (55.15%), Query Frame = 2 Query: 179 MMSTGELLNIEPQ-ELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSTCDVIVTMQSQKEAPPDMQCKDKFLLQGVVASPGATAKDITPEMFNREAGHHVEECKLRVLYVAPPRPPSP 583 M ++L++EPQ EL+F ++ +L+L N TD V FKVKTT P++YCVRPN+GV+ ++ +V V +Q + P+ + K KF++Q + A P + + ++ + + KLR ++ P P Sbjct: 1 MAKVEQVLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTVPRRYCVRPNSGVIDAGASLNVSVMLQ-PFDYDPNEKSKHKFMVQSMFAPPDTSDME---AVWKEAKPEDLMDSKLRCVFELPAENAKP 132
BLAST of FC920731 vs. ExPASy Swiss-Prot
Match: VAPA_PONAB (Vesicle-associated membrane protein-associated protein A OS=Pongo abelii GN=VAPA PE=2 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 1.686e-12 Identity = 47/153 (30.72%), Postives = 79/153 (51.63%), Query Frame = 2 Query: 212 PQELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSTCDVIVTMQSQKEAPPDMQCKDKFLLQGVVASPGATAKDITPEMFNREAGHHVEECKLRVLYVAP----------PRPPSPVHEGSEEGSSPRA-SVSDN 637 P +L+F ++ +L+L N +D V FKVKTT P++YCVRPN+G++ P ST V V +Q + P+ + K KF++Q + A P + + ++ + + KLR ++ P P P++ ++G P+ SVS N Sbjct: 20 PTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGSTVTVSVMLQ-PFDYDPNEKSKHKFMVQTIFAPPNTSDME---AVWKEAKPDELMDSKLRCVFEMPNENDKLNDMEPSKAVPLNASKQDGPMPKPHSVSLN 168
BLAST of FC920731 vs. ExPASy Swiss-Prot
Match: VAPA_HUMAN (Vesicle-associated membrane protein-associated protein A OS=Homo sapiens GN=VAPA PE=1 SV=3) HSP 1 Score: 73.1738 bits (178), Expect = 1.686e-12 Identity = 47/153 (30.72%), Postives = 79/153 (51.63%), Query Frame = 2 Query: 212 PQELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSTCDVIVTMQSQKEAPPDMQCKDKFLLQGVVASPGATAKDITPEMFNREAGHHVEECKLRVLYVAP----------PRPPSPVHEGSEEGSSPRA-SVSDN 637 P +L+F ++ +L+L N +D V FKVKTT P++YCVRPN+G++ P ST V V +Q + P+ + K KF++Q + A P + + ++ + + KLR ++ P P P++ ++G P+ SVS N Sbjct: 20 PTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGSTVTVSVMLQ-PFDYDPNEKSKHKFMVQTIFAPPNTSDME---AVWKEAKPDELMDSKLRCVFEMPNENDKLNDMEPSKAVPLNASKQDGPMPKPHSVSLN 168
BLAST of FC920731 vs. ExPASy Swiss-Prot
Match: VP33_APLCA (Vesicle-associated membrane protein/synaptobrevin-binding protein OS=Aplysia californica PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.906e-12 Identity = 49/136 (36.03%), Postives = 71/136 (52.21%), Query Frame = 2 Query: 179 MMSTGELLNIEPQ-ELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSTCDVIVTMQSQKEAPPDMQCKDKFLLQG------VVASPGATAKDITPEMFNREAGHHVEECKLRVLYVAP 565 M S + L +EP EL+F ++ L+LSN TD + FKVKTT PK+YCVRPN+G++ P+++ V V +Q P + K KF++Q VV S KD PE + + KLR ++ P Sbjct: 1 MASHEQALILEPAGELRFKGPFTDVVTADLKLSNPTDRRICFKVKTTAPKRYCVRPNSGILEPKTSIAVAVMLQPFNYDPNEKN-KHKFMVQSMYAPDHVVESQELLWKDAPPE--------SLMDTKLRCVFEMP 127
BLAST of FC920731 vs. ExPASy Swiss-Prot
Match: VAPA_RAT (Vesicle-associated membrane protein-associated protein A OS=Rattus norvegicus GN=Vapa PE=1 SV=3) HSP 1 Score: 71.2478 bits (173), Expect = 6.407e-12 Identity = 47/153 (30.72%), Postives = 78/153 (50.98%), Query Frame = 2 Query: 212 PQELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSTCDVIVTMQSQKEAPPDMQCKDKFLLQGVVASPGATAKDITPEMFNREAGHHVEECKLRVLYVAP----------PRPPSPVHEGSEEGSSPRA-SVSDN 637 P +L+F ++ +L+L N +D V FKVKTT P++YCVRPN+GV+ P S V V +Q + P+ + K KF++Q + A P + + ++ + + KLR ++ P P P++ ++G P+ SVS N Sbjct: 20 PSDLKFKGPFTDVVTTNLKLQNPSDRKVCFKVKTTAPRRYCVRPNSGVIDPGSIVTVSVMLQ-PFDYDPNEKSKHKFMVQTIFAPPNISDME---AVWKEAKPDELMDSKLRCVFEMPNENDKLNDMEPSKAVPLNASKQDGPLPKPHSVSLN 168
BLAST of FC920731 vs. ExPASy Swiss-Prot
Match: VAPA_MOUSE (Vesicle-associated membrane protein-associated protein A OS=Mus musculus GN=Vapa PE=1 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 8.368e-12 Identity = 46/153 (30.07%), Postives = 78/153 (50.98%), Query Frame = 2 Query: 212 PQELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSTCDVIVTMQSQKEAPPDMQCKDKFLLQGVVASPGATAKDITPEMFNREAGHHVEECKLRVLYVAP----------PRPPSPVHEGSEEGSSPRA-SVSDN 637 P +L+F ++ +L+L N +D V FKVKTT P++YCVRPN+G++ P S V V +Q + P+ + K KF++Q + A P + + ++ + + KLR ++ P P P++ ++G P+ SVS N Sbjct: 20 PSDLKFKGPFTDVVTTNLKLQNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGSIVTVSVMLQ-PFDYDPNEKSKHKFMVQTIFAPPNISDME---AVWKEAKPDELMDSKLRCVFEMPNENDKLNDMEPSKAVPLNASKQDGPLPKPHSVSLN 168
BLAST of FC920731 vs. ExPASy Swiss-Prot
Match: VAPB_PIG (Vesicle-associated membrane protein-associated protein B OS=Sus scrofa GN=VAPB PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.427e-11 Identity = 46/141 (32.62%), Postives = 75/141 (53.19%), Query Frame = 2 Query: 179 MMSTGELLNIEPQ-ELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSTCDVIVTMQSQKEAPPDMQCKDKFLLQGVVASPG-----ATAKDITPEMFNREAGHHVEECKLRVLYVAPPRPPSP 583 M ++L++EPQ EL+F ++ +L+L N TD V FKVKTT P++YCVRPN+G++ ++ +V V +Q + P+ + K KF++Q + A A K+ PE + + KLR ++ P P Sbjct: 1 MAKVEQVLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGIIDAGASINVSVMLQ-PFDYDPNEKSKHKFMVQSMFAPADTSDMEAAWKEAKPE--------DLMDSKLRCVFELPAENDKP 132 The following BLAST results are available for this feature:
BLAST of FC920731 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920731 ID=FC920731; Name=FC920731; organism=Citrus clementina; type=EST; length=740bpback to top |