FC920960
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920960 vs. ExPASy Swiss-Prot
Match: DEF06_ARATH (Defensin-like protein 6 OS=Arabidopsis thaliana GN=PDF2.5 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.517e-17 Identity = 35/57 (61.40%), Postives = 44/57 (77.19%), Query Frame = 3 Query: 126 SQEMMVPAEGRVCQSQSHHFHGACFSHHNCAFVCRNEGFSGGKCRGARRRCFCSKLC 296 S + ++ EGR CQS+SHHF C S+HNCA VCRNEGFSGG+C G RRC+C++LC Sbjct: 17 SSQEIIGGEGRTCQSKSHHFKYMCTSNHNCAIVCRNEGFSGGRCHGFHRRCYCTRLC 73
BLAST of FC920960 vs. ExPASy Swiss-Prot
Match: DEF_SOYBN (Defensin-like protein OS=Glycine max PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 9.836e-17 Identity = 35/57 (61.40%), Postives = 46/57 (80.70%), Query Frame = 3 Query: 126 SQEMMVPAEGRVCQSQSHHFHGACFSHHNCAFVCRNEGFSGGKCRGARRRCFCSKLC 296 + +++V EGRVC+SQSH FHG C HNCA VCRNEGFSGG+C+ + RRCFC+++C Sbjct: 19 ASQVVVQTEGRVCESQSHGFHGLCNRDHNCALVCRNEGFSGGRCKRS-RRCFCTRIC 74
BLAST of FC920960 vs. ExPASy Swiss-Prot
Match: DEF1_VIGUN (Defensin-like protein 1 OS=Vigna unguiculata PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 4.881e-16 Identity = 35/47 (74.47%), Postives = 37/47 (78.72%), Query Frame = 3 Query: 156 RVCQSQSHHFHGACFSHHNCAFVCRNEGFSGGKCRGARRRCFCSKLC 296 RVC+SQSH F GAC HNCA VCRNEGFSGG CRG RRRCFC+ C Sbjct: 1 RVCESQSHGFKGACTGDHNCALVCRNEGFSGGNCRGFRRRCFCTLKC 47
BLAST of FC920960 vs. ExPASy Swiss-Prot
Match: DEF01_ARATH (Defensin-like protein 1 OS=Arabidopsis thaliana GN=PDF2.3 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.423e-15 Identity = 33/52 (63.46%), Postives = 38/52 (73.08%), Query Frame = 3 Query: 141 VPAEGRVCQSQSHHFHGACFSHHNCAFVCRNEGFSGGKCRGARRRCFCSKLC 296 V E R C+S+SH F G C S HNCA VC NEGF GGKCRG RRRC+C++ C Sbjct: 26 VTVEARTCESKSHRFKGPCVSTHNCANVCHNEGFGGGKCRGFRRRCYCTRHC 77
BLAST of FC920960 vs. ExPASy Swiss-Prot
Match: DEF_PETIN (Defensin-like protein OS=Petunia integrifolia PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.570e-14 Identity = 32/53 (60.38%), Postives = 36/53 (67.92%), Query Frame = 3 Query: 138 MVPAEGRVCQSQSHHFHGACFSHHNCAFVCRNEGFSGGKCRGARRRCFCSKLC 296 M AE R C+SQSH FHG C NCA VC+ EGF GG CR RRRCFC++ C Sbjct: 26 MTSAEARTCESQSHRFHGTCVRESNCASVCQTEGFIGGNCRAFRRRCFCTRNC 78
BLAST of FC920960 vs. ExPASy Swiss-Prot
Match: DEF2_CAPAN (Defensin J1-2 OS=Capsicum annuum PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.570e-14 Identity = 32/50 (64.00%), Postives = 36/50 (72.00%), Query Frame = 3 Query: 147 AEGRVCQSQSHHFHGACFSHHNCAFVCRNEGFSGGKCRGARRRCFCSKLC 296 AE R C+SQSH F G CFS NC VC EGF+GG CRG RRRCFC++ C Sbjct: 25 AEARTCESQSHRFKGLCFSKSNCGSVCHTEGFNGGHCRGFRRRCFCTRHC 74
BLAST of FC920960 vs. ExPASy Swiss-Prot
Match: DEF02_ARATH (Defensin-like protein 2 OS=Arabidopsis thaliana GN=PDF2.2 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.051e-14 Identity = 33/52 (63.46%), Postives = 36/52 (69.23%), Query Frame = 3 Query: 141 VPAEGRVCQSQSHHFHGACFSHHNCAFVCRNEGFSGGKCRGARRRCFCSKLC 296 V E R C+SQSH F G C S NCA VC NEGF GG CRG RRRCFC++ C Sbjct: 26 VTVEARTCESQSHRFKGTCVSASNCANVCHNEGFVGGNCRGFRRRCFCTRHC 77
BLAST of FC920960 vs. ExPASy Swiss-Prot
Match: DEF_NELNU (Defensin-like protein OS=Nelumbo nucifera PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.678e-14 Identity = 33/50 (66.00%), Postives = 36/50 (72.00%), Query Frame = 3 Query: 147 AEGRVCQSQSHHFHGACFSHHNCAFVCRNEGFSGGKCRGARRRCFCSKLC 296 AE R C+SQSH F GAC S NCA VC+ EGF G C+GARRRCFC K C Sbjct: 28 AEARTCESQSHRFKGACLSDTNCASVCQTEGFPAGDCKGARRRCFCVKPC 77
BLAST of FC920960 vs. ExPASy Swiss-Prot
Match: DFSD2_HELAN (Defensin SD2 OS=Helianthus annuus GN=SD2 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.736e-13 Identity = 32/49 (65.31%), Postives = 35/49 (71.43%), Query Frame = 3 Query: 150 EGRVCQSQSHHFHGACFSHHNCAFVCRNEGFSGGKCRGARRRCFCSKLC 296 E R C+SQSH F G C S NCA VC +E FSGGKCRG RRRCFC+ C Sbjct: 30 EARTCESQSHKFKGTCLSDTNCANVCHSERFSGGKCRGFRRRCFCTTHC 78
BLAST of FC920960 vs. ExPASy Swiss-Prot
Match: DEF04_ARATH (Defensin-like protein 4 OS=Arabidopsis thaliana GN=PDF2.1 PE=2 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 1.920e-12 Identity = 31/52 (59.62%), Postives = 33/52 (63.46%), Query Frame = 3 Query: 141 VPAEGRVCQSQSHHFHGACFSHHNCAFVCRNEGFSGGKCRGARRRCFCSKLC 296 V E R C SQS F G C S NC VC NEGF GG CRG RRRCFC++ C Sbjct: 26 VTVEARTCASQSQRFKGKCVSDTNCENVCHNEGFPGGDCRGFRRRCFCTRNC 77 The following BLAST results are available for this feature:
BLAST of FC920960 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920960 ID=FC920960; Name=FC920960; organism=Citrus clementina; type=EST; length=597bpback to top |