FC921075
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921075 vs. ExPASy Swiss-Prot
Match: RL36_LACRJ (50S ribosomal protein L36 OS=Lactobacillus reuteri (strain JCM 1112) GN=rpmJ PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.495e-11 Identity = 32/38 (84.21%), Postives = 33/38 (86.84%), Query Frame = 1 Query: 103 MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQG 216 MKVR SVKKMCE CKI+KR GRV VICSAN KHKQRQG Sbjct: 1 MKVRPSVKKMCEHCKIVKRNGRVMVICSANPKHKQRQG 38
BLAST of FC921075 vs. ExPASy Swiss-Prot
Match: RL36_LACRD (50S ribosomal protein L36 OS=Lactobacillus reuteri (strain DSM 20016) GN=rpmJ PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.495e-11 Identity = 32/38 (84.21%), Postives = 33/38 (86.84%), Query Frame = 1 Query: 103 MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQG 216 MKVR SVKKMCE CKI+KR GRV VICSAN KHKQRQG Sbjct: 1 MKVRPSVKKMCEHCKIVKRNGRVMVICSANPKHKQRQG 38
BLAST of FC921075 vs. ExPASy Swiss-Prot
Match: RL36_LACCB (50S ribosomal protein L36 OS=Lactobacillus casei (strain BL23) GN=rpmJ PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 5.559e-11 Identity = 29/38 (76.32%), Postives = 34/38 (89.47%), Query Frame = 1 Query: 103 MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQG 216 MKVR SVKKMCE CK+++R+GRV +ICSAN KHKQRQG Sbjct: 1 MKVRPSVKKMCEHCKVVRRKGRVMIICSANPKHKQRQG 38
BLAST of FC921075 vs. ExPASy Swiss-Prot
Match: RL36_LACC3 (50S ribosomal protein L36 OS=Lactobacillus casei (strain ATCC 334) GN=rpmJ PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 5.559e-11 Identity = 29/38 (76.32%), Postives = 34/38 (89.47%), Query Frame = 1 Query: 103 MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQG 216 MKVR SVKKMCE CK+++R+GRV +ICSAN KHKQRQG Sbjct: 1 MKVRPSVKKMCEHCKVVRRKGRVMIICSANPKHKQRQG 38
BLAST of FC921075 vs. ExPASy Swiss-Prot
Match: RL36_SYNY3 (50S ribosomal protein L36 OS=Synechocystis sp. (strain PCC 6803) GN=rpmJ PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 7.260e-11 Identity = 30/38 (78.95%), Postives = 35/38 (92.11%), Query Frame = 1 Query: 103 MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQG 216 MKVR+SVKKMC+ C++I+RRGRV VICSAN KHKQRQG Sbjct: 1 MKVRASVKKMCDKCRVIRRRGRVMVICSANPKHKQRQG 38
BLAST of FC921075 vs. ExPASy Swiss-Prot
Match: RL36_LACJO (50S ribosomal protein L36 OS=Lactobacillus johnsonii GN=rpmJ PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 7.260e-11 Identity = 32/38 (84.21%), Postives = 33/38 (86.84%), Query Frame = 1 Query: 103 MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQG 216 MKVR SVK MCE CKIIKR+GRV VICSAN KHKQRQG Sbjct: 1 MKVRPSVKPMCEHCKIIKRQGRVMVICSANPKHKQRQG 38
BLAST of FC921075 vs. ExPASy Swiss-Prot
Match: RL36_LACBA (50S ribosomal protein L36 OS=Lactobacillus brevis (strain ATCC 367 / JCM 1170) GN=rpmJ PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 7.260e-11 Identity = 31/38 (81.58%), Postives = 33/38 (86.84%), Query Frame = 1 Query: 103 MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQG 216 MKVR SVK MCE CK+IKR+GRV VICSAN KHKQRQG Sbjct: 1 MKVRPSVKPMCEHCKVIKRKGRVMVICSANPKHKQRQG 38
BLAST of FC921075 vs. ExPASy Swiss-Prot
Match: RL36_LACGA (50S ribosomal protein L36 OS=Lactobacillus gasseri (strain ATCC 33323 / DSM 20243) GN=rpmJ PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 9.482e-11 Identity = 32/38 (84.21%), Postives = 32/38 (84.21%), Query Frame = 1 Query: 103 MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQG 216 MKVR SVK MCE CKIIKR GRV VICSAN KHKQRQG Sbjct: 1 MKVRPSVKPMCEHCKIIKRHGRVMVICSANPKHKQRQG 38 The following BLAST results are available for this feature:
BLAST of FC921075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC921075 ID=FC921075; Name=FC921075; organism=Citrus clementina; type=EST; length=564bpback to top |