FC921106
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921106 vs. ExPASy Swiss-Prot
Match: LIGA_PONAB (Ligatin OS=Pongo abelii GN=LGTN PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.112e-16 Identity = 60/190 (31.58%), Postives = 87/190 (45.79%), Query Frame = 3 Query: 15 EDVDAYLDKCLLQALHTTVKDKDLPMPGSTLWSNHILPCRPSGITLDIXXXXXXXXXXXXQAKSSAGLISVKEDKYKKESMLFSVNRGHPDYLSFK-PEKRPAEKASQAVDHAASDNIQPAKHIEVTEVYKPSVHVNPIFASVGADTGRLYTFSEACDVVFNYIEKDNLVKPTDKSIVVLDPTLCDALFK 581 E +D L +C L AL VK DLP+ ST +H+ C P G LDI Q +I VKE ES++ +V+ HP SF PE P SQ + + + QP ++ +Y + +F G G SE +V NY +K++LV +K++V LDP LCD + + Sbjct: 262 EQMDELLQQCFLHALKCRVKKADLPLLASTFLGSHMFSCCPEGRQLDIKKSSYKKLSKFLQQMQQEQIIQVKELSKGVESIV-AVDWKHPRITSFVIPEPSP---TSQTIQEGSRE--QPYHPPDIKPLYCVPASMTLLFQESGHKKGSFLEGSEVRTIVINYAKKNDLVDADNKNLVRLDPILCDCILE 445
BLAST of FC921106 vs. ExPASy Swiss-Prot
Match: LIGA_HUMAN (Ligatin OS=Homo sapiens GN=LGTN PE=1 SV=3) HSP 1 Score: 83.9593 bits (206), Expect = 8.720e-16 Identity = 60/190 (31.58%), Postives = 87/190 (45.79%), Query Frame = 3 Query: 15 EDVDAYLDKCLLQALHTTVKDKDLPMPGSTLWSNHILPCRPSGITLDIXXXXXXXXXXXXQAKSSAGLISVKEDKYKKESMLFSVNRGHPDYLSFK-PEKRPAEKASQAVDHAASDNIQPAKHIEVTEVYKPSVHVNPIFASVGADTGRLYTFSEACDVVFNYIEKDNLVKPTDKSIVVLDPTLCDALFK 581 E +D L +C L AL VK DLP+ ST +H+ C P G LDI Q +I VKE ES++ +V+ HP SF PE P SQ + + + QP ++ +Y + +F G G SE +V NY +K++LV +K++V LDP LCD + + Sbjct: 262 EQMDELLQQCFLHALKCRVKKADLPLLTSTFLGSHMFSCCPEGRQLDIKKSSYKKLSKFLQQMQQEQIIQVKELSKGVESIV-AVDWKHPRITSFVIPEPSP---TSQTIQEGSRE--QPYHPPDIKPLYCVPASMTLLFQESGHKKGSFLEGSEVRTIVINYAKKNDLVDADNKNLVRLDPILCDCILE 445
BLAST of FC921106 vs. ExPASy Swiss-Prot
Match: LIGA_BOVIN (Ligatin OS=Bos taurus GN=LGTN PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.328e-15 Identity = 59/190 (31.05%), Postives = 88/190 (46.32%), Query Frame = 3 Query: 15 EDVDAYLDKCLLQALHTTVKDKDLPMPGSTLWSNHILPCRPSGITLDIXXXXXXXXXXXXQAKSSAGLISVKEDKYKKESMLFSVNRGHPDYLSFK-PEKRPAEKASQAVDHAASDNIQPAKHIEVTEVYKPSVHVNPIFASVGADTGRLYTFSEACDVVFNYIEKDNLVKPTDKSIVVLDPTLCDALFK 581 E +D L C L AL +V+ DLP+ STL +H+ C P G LDI Q +I V+E ES++ +V+ HP SF PE P SQ + + + QP ++ +Y + +F G G + SE V NY +K++LV +K++V LDP LCD + + Sbjct: 257 EQMDELLQTCFLHALKCSVRKADLPLLTSTLLGSHMFSCCPEGRQLDIKKSSYKKLSKFLQHMQQEQIIQVQELSKGVESIV-AVDWKHPRITSFVIPEPSP---TSQTIQEGSRE--QPYHPPDIKPLYCVPASMTLLFQESGHKKGSVLEGSEVRTFVINYAKKNDLVDADNKNLVKLDPILCDCILE 440
BLAST of FC921106 vs. ExPASy Swiss-Prot
Match: LIGA_RAT (Ligatin OS=Rattus norvegicus GN=Lgtn PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.652e-15 Identity = 57/190 (30.00%), Postives = 91/190 (47.89%), Query Frame = 3 Query: 15 EDVDAYLDKCLLQALHTTVKDKDLPMPGSTLWSNHILPCRPSGITLDIXXXXXXXXXXXXQAKSSAGLISVKEDKYKKESMLFSVNRGHPDYLSF-KPEKRPAEKASQAVDHAASDNIQPAKHIEVTEVYKPSVHVNPIFASVGADTGRLYTFSEACDVVFNYIEKDNLVKPTDKSIVVLDPTLCDALFK 581 E +D L++C L AL + VK DLP+ STL +H+ C P G LDI Q ++ VKE ES++ +V+ HP SF PE ASQ V + + +P ++ +Y ++ +F G G SE ++ +Y +++NLV ++++V LDP LCD + + Sbjct: 249 EQMDELLEQCFLHALKSRVKKADLPLLTSTLLGSHMFSCCPEGQQLDIKKSSYKKLSKFLQHMQQEQIVQVKELSKGVESIV-AVDWRHPRITSFIVPE---PSLASQTVQEGSRE--KPYLPPDIKSLYCVPANMTQLFLESGHKKGSTLEGSEVRRIITDYAKRNNLVDADNRNLVKLDPILCDCILE 432
BLAST of FC921106 vs. ExPASy Swiss-Prot
Match: LIGA_MOUSE (Ligatin OS=Mus musculus GN=Lgtn PE=2 SV=3) HSP 1 Score: 77.0258 bits (188), Expect = 1.066e-13 Identity = 55/190 (28.95%), Postives = 86/190 (45.26%), Query Frame = 3 Query: 15 EDVDAYLDKCLLQALHTTVKDKDLPMPGSTLWSNHILPCRPSGITLDIXXXXXXXXXXXXQAKSSAGLISVKEDKYKKESMLFSVNRGHPDYLSFK-PEKRPAEKASQAVDHAASDNIQPAKHIEVTEVYKPSVHVNPIFASVGADTGRLYTFSEACDVVFNYIEKDNLVKPTDKSIVVLDPTLCDALFK 581 E +D L +C L AL + VK DLP+ STL +H+ C P G LDI Q ++ VKE ES++ +V+ HP SF PE + Q V QP ++ +Y ++ +F G G SE ++ +Y +++ LV ++++V LDP LCD + + Sbjct: 249 EQMDDLLLRCFLHALKSRVKKADLPLLTSTLLGSHMFSCCPEGQQLDIKKSSYKKLSKFLQHMQQEQIVQVKELSKGVESIV-AVDWRHPRITSFVIPEPSLTSQTVQEVSRE-----QPYLPPDIKSLYCVPANMTQLFLESGHKKGSTLEGSEVRKIITDYAKRNRLVDADNRNLVKLDPILCDCILE 432 The following BLAST results are available for this feature:
BLAST of FC921106 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC921106 ID=FC921106; Name=FC921106; organism=Citrus clementina; type=EST; length=703bpback to top |