FC921221
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921221 vs. ExPASy Swiss-Prot
Match: PP351_ARATH (Pentatricopeptide repeat-containing protein At4g35850, mitochondrial OS=Arabidopsis thaliana GN=At4g35850 PE=1 SV=1) HSP 1 Score: 287.73 bits (735), Expect = 4.158e-77 Identity = 138/207 (66.67%), Postives = 170/207 (82.13%), Query Frame = 2 Query: 59 TGHHKSVGGAL-GRRFFVTSAGAEEYARRNYANNASEYNTVVTSLTSQRRFFLLRDVYDDMMLDGVQPTRDLFHSLIVGTMKGSRLQDTFFFRDQMKANGFLPDVAVYNYLISVCGKCKNSDQAIRIFEEMKKYEVKPNGQTYVCLLNACAAAGQLDPVYAIVRDMTAAGAGLDKFCYAGLITAHTNKIPRADDTATKIIELVNSQR 676 +G ++S+ AL RR+F +S EE A+RNYAN+ SEYNT V S+T+QRR +LLRDVYDDM LDGVQPT D+FHS +VGTMKG+RL D FFFR++MKA G PDV +YN+LIS CGKCKN +AIR+++EMK+Y+VKPNGQT+VCLLNACA +GQLD VYAIVRDMTAAG GL++FCYAGLITAH NK PR D+ +TKI+E V + Sbjct: 9 SGRNRSLVRALVSRRYFASSP--EEIAKRNYANDLSEYNTAVNSVTAQRRHYLLRDVYDDMKLDGVQPTADIFHSFVVGTMKGARLSDAFFFREEMKAMGIAPDVNLYNFLISTCGKCKNGKEAIRVYDEMKRYDVKPNGQTFVCLLNACAVSGQLDLVYAIVRDMTAAGVGLNQFCYAGLITAHLNKQPRPDNLSTKILEFVEQSK 213
BLAST of FC921221 vs. ExPASy Swiss-Prot
Match: PP132_ARATH (Pentatricopeptide repeat-containing protein At1g79490, mitochondrial OS=Arabidopsis thaliana GN=EMB2217 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.720e-14 Identity = 54/177 (30.51%), Postives = 82/177 (46.33%), Query Frame = 2 Query: 125 EEYARRNYANNASEYNTVVTSLTSQRRFFLLRDVYDDMMLDGVQPTRDLFHSLIVGTMKGSRLQDTFFFRDQMKANGFLPDVAVYNYLISVCGKCKNSDQAIRIFEEMKKYEVKPNGQTYVCLLNACAAAGQLDPVYAIVRDMTAAGAGLDKFCYAGLITAHTNKIPRADDTATKII 655 ++ R + S ++++V S+ R VY +M G +P+ +F SLI K +L D+MK +GF P+ +Y +I K + A+ +F++M+K P TY CLL A +GQ+D I MT AG Y L+T NK R D A KI+ Sbjct: 337 QQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANK--RLVDVAGKIL 511
BLAST of FC921221 vs. ExPASy Swiss-Prot
Match: PP325_ARATH (Pentatricopeptide repeat-containing protein At4g19440, chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 1.232e-12 Identity = 42/159 (26.42%), Postives = 73/159 (45.91%), Query Frame = 2 Query: 125 EEYARRNYANNASEYNTVVTSLTSQRRFFLLRDVYDDMMLDGVQPTRDLFHSLIVGTMKGSRLQDTFFFRDQMKANGFLPDVAVYNYLISVCGKCKNSDQAIRIFEEMKKYEVKPNGQTYVCLLNACAAAGQLDPVYAIVRDMTAAGAGLDKFCYAGLI 601 +E R + YNT+++ +++ D+M+ G++P + LI G +++++ F D K NG LPDV Y+ +I C K + +++ F+EM V+PN Y L+ A +G+L + DM G + Y LI Sbjct: 542 KEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLI 700
BLAST of FC921221 vs. ExPASy Swiss-Prot
Match: PP288_ARATH (Pentatricopeptide repeat-containing protein At3g60050 OS=Arabidopsis thaliana GN=At3g60050 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.683e-12 Identity = 42/156 (26.92%), Postives = 71/156 (45.51%), Query Frame = 2 Query: 143 NYANNASEYNTVVTSLTSQRRFFLLRDVYDDMMLDGVQPTRDLFHSLIVGTMKGSRLQDTFFFRDQMKANGFLPDVAVYNYLISVCGKCKNSDQAIRIFEEMKKYEVKPNGQTYVCLLNACAAAGQLDPVYAIVRDMTAAGAGLDKFCYAGLITAH 610 NY YN ++ SL +++ L+ VY M+ DG P ++ L+ + ++ D+M +GF PD YN L+ + GK A+ MK+ + P+ Y L++ + AG L+ + +M AG D CY +IT + Sbjct: 214 NYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGY 369
BLAST of FC921221 vs. ExPASy Swiss-Prot
Match: PP275_ARATH (Pentatricopeptide repeat-containing protein At3g49730 OS=Arabidopsis thaliana GN=At3g49730 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.116e-12 Identity = 41/165 (24.85%), Postives = 79/165 (47.88%), Query Frame = 2 Query: 128 EYARRNYANNASEYNTVVTSLTSQRRFFLLRDVYDDMMLDGVQPTRDLFHSLIVGTMKGSRLQDTFFFRDQMKANGFLPDVAVYNYLI-SVCGKCKNSDQAIRIFEEMKKYEVKPNGQTYVCLLNACAAAGQLDPVYAIVRDMTAAGAGLDKFCYAGLITAHTNK 619 E R + N + +++ + + ++V M G++P +F +L+ G ++ D + + M+ GF P+V Y LI ++C K D+A+R+F EM++Y + + TY L++ G +D Y+++ DM G + Y ++ AH K Sbjct: 226 EDMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKK 390
BLAST of FC921221 vs. ExPASy Swiss-Prot
Match: PP190_ARATH (Pentatricopeptide repeat-containing protein At2g37230 OS=Arabidopsis thaliana GN=At2g37230 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.116e-12 Identity = 37/145 (25.52%), Postives = 76/145 (52.41%), Query Frame = 2 Query: 167 YNTVVTSLTSQRRFFLLRDVYDDMMLDGVQPTRDLFHSLIVGTMKGSRLQDTFFFRDQMKANGFLPDVAVYNYLISVCGKCKNSDQAIRIFEEMKKYEVKPNGQTYVCLLNACAAAGQLDPVYAIVRDMTAAGAGLDKFCYAGLI 601 YN++ + + R+ + + ++ M+ +GV+PTR ++ ++ G RL+ F + MK G PD A +N +I+ + K D+A ++F EMK ++ P+ +Y ++ A ++D I +M ++G + Y+ L+ Sbjct: 223 YNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLL 367
BLAST of FC921221 vs. ExPASy Swiss-Prot
Match: PP442_ARATH (Pentatricopeptide repeat-containing protein At5g61990, mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.964e-11 Identity = 49/184 (26.63%), Postives = 78/184 (42.39%), Query Frame = 2 Query: 128 EYARRNYANNASEYNTVVTSLTSQRRFFLLRDVYDDMMLDGVQPTRDLFHSLIVGTMKGSRLQDTFFFRDQMKANGFLPDVAVYNYLISVCGKCKNSDQAIRIFEEMKKYEVKPNGQTYVCLLNACAAAGQLDPVYAIVRDMTAAGAGLDKFCYAGLITAHTNKIPRADDTATKIIELVNSQRA 679 E +RN + Y TVV + S ++ +M+ G +P ++ +LI ++ SR D +MK G PD+ YN LI K K D+A EM + +KPN TY ++ A + V++M G +K GLI + K K+IE ++ R+ Sbjct: 407 EMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKK--------GKVIEACSAYRS 582
BLAST of FC921221 vs. ExPASy Swiss-Prot
Match: PP407_ARATH (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.762e-11 Identity = 39/159 (24.53%), Postives = 70/159 (44.03%), Query Frame = 2 Query: 128 EYARRNYANNASEYNTVVTSLTSQRRFFLLRDVYDDMMLDGVQPTRDLFHSLIVGTMKGSRLQDTFFFRDQMKANGFLPDVAVYNYLISVCGKCKNSDQAIRIFEEMKKYEVKPNGQTYVCLLNACAAAGQLDPVYAIVRDMTAAGAGLDKFCYAGLIT 604 E RR Y+ + YNT++ + F ++ +M+ G+ P+ + SLI K + F DQM+ G P+ Y L+ + ++A R+ EM P+ TY L+N G+++ A++ DM G D Y+ +++ Sbjct: 300 EMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLS 458
BLAST of FC921221 vs. ExPASy Swiss-Prot
Match: PP344_ARATH (Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.832e-11 Identity = 49/174 (28.16%), Postives = 78/174 (44.83%), Query Frame = 2 Query: 155 NASEYNTVVTSLTSQRRFFLLRDVYDDMMLD-GVQPTRDLFHSLIVGTMKGSRLQDTFFFRDQMKANGFLPDVAVYNYLISVCGKCKNSDQAIRIFEEMKKYEVKPNGQTYVCLLNACAAAGQLDPVYAIVRDMTAAGAGLDKFCYAGLITAHTNKIPRADDTATKIIELVNSQ 673 N +N V++ L D+Y D+M D PT + LI G K RL + + M G P+ A+YN LI+ GK +D A +F+ M K V+P+ +TY L++ G++D +++ +G D CY LI K R ++ E+ S+ Sbjct: 854 NTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCY-NLIINGLGKSHRLEEALVLFNEMKTSR 1026 The following BLAST results are available for this feature:
BLAST of FC921221 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC921221 ID=FC921221; Name=FC921221; organism=Citrus clementina; type=EST; length=722bpback to top |