FC921407
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC921407 vs. ExPASy Swiss-Prot
Match: SBP_ARATH (Putative selenium-binding protein OS=Arabidopsis thaliana GN=At4g14030 PE=2 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 4.407e-45 Identity = 86/124 (69.35%), Postives = 100/124 (80.65%), Query Frame = 3 Query: 90 MATDTAVAEHRSSNNG--HGCCAKG-PGYAPPLDAMSGPREKLLYVTCLYTGTGREKPDYLATVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDSSAXRRFLVLPFLVSGRIYIV 452 MAT+T V + +NG GCC G PGYA PL AMSGP EKL+YVT +YTGTG +KPDYLATVD DPSS SYS VIHRLP+P++GDELHHSGWNSCSSC+GD+S RR+LVLP L+SGRIY + Sbjct: 1 MATETEVVAPVTVSNGGSKGCCKYGGPGYATPLAAMSGPSEKLIYVTAVYTGTGIDKPDYLATVDVDPSSPSYSSVIHRLPMPFVGDELHHSGWNSCSSCHGDASVDRRYLVLPSLISGRIYAI 124
BLAST of FC921407 vs. ExPASy Swiss-Prot
Match: SBP1A_XENLA (Selenium-binding protein 1-A OS=Xenopus laevis GN=selenbp1-A PE=2 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 3.059e-38 Identity = 69/103 (66.99%), Postives = 82/103 (79.61%), Query Frame = 3 Query: 144 CCAKGPGYAPPLDAMSGPREKLLYVTCLYTGTGREKPDYLATVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDSSAXRRFLVLPFLVSGRIYIV 452 C + GPGY PLDAM GPRE+++Y+ C+Y TG KPDYLATVD DP S SYS+VIHRLP+P + DELHHSGWN+CSSCYGDSS R L+LP L+S RIY+V Sbjct: 4 CGSCGPGYKSPLDAMKGPREEIVYLPCIYRSTGINKPDYLATVDVDPKSPSYSQVIHRLPMPNVNDELHHSGWNTCSSCYGDSSKVRNKLILPCLISSRIYVV 106
BLAST of FC921407 vs. ExPASy Swiss-Prot
Match: SBP1B_XENLA (Selenium-binding protein 1-B OS=Xenopus laevis GN=selenbp1-B PE=2 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 8.901e-38 Identity = 67/103 (65.05%), Postives = 82/103 (79.61%), Query Frame = 3 Query: 144 CCAKGPGYAPPLDAMSGPREKLLYVTCLYTGTGREKPDYLATVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDSSAXRRFLVLPFLVSGRIYIV 452 C + GPGY PLDAM GPRE+++Y+ C+Y TG KPDYLATVD DP S +YS+VIHRLP+P + DELHHSGWN+CSSCYGDSS R L+LP L+S R+Y+V Sbjct: 4 CGSCGPGYKSPLDAMKGPREEIVYLPCIYRSTGINKPDYLATVDVDPKSPTYSQVIHRLPMPNVNDELHHSGWNTCSSCYGDSSKVRNKLILPCLISSRVYVV 106
BLAST of FC921407 vs. ExPASy Swiss-Prot
Match: SBP1_MOUSE (Selenium-binding protein 1 OS=Mus musculus GN=Selenbp1 PE=1 SV=2) HSP 1 Score: 154.451 bits (389), Expect = 1.983e-37 Identity = 66/103 (64.08%), Postives = 82/103 (79.61%), Query Frame = 3 Query: 144 CCAKGPGYAPPLDAMSGPREKLLYVTCLYTGTGREKPDYLATVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDSSAXRRFLVLPFLVSGRIYIV 452 C GPGY+ PL+AM GPRE+++Y+ C+Y TG E PDYLATVD DP S YS+VIHRLP+PY+ DELHHSGWN+CSSC+GDS+ R L+LP L+S RIY+V Sbjct: 5 CTKCGPGYSTPLEAMKGPREEIVYLPCIYRNTGTEAPDYLATVDVDPKSPQYSQVIHRLPMPYLKDELHHSGWNTCSSCFGDSTKSRNKLILPGLISSRIYVV 107
BLAST of FC921407 vs. ExPASy Swiss-Prot
Match: SBP2_MOUSE (Selenium-binding protein 2 OS=Mus musculus GN=Selenbp2 PE=1 SV=2) HSP 1 Score: 153.68 bits (387), Expect = 3.382e-37 Identity = 66/103 (64.08%), Postives = 81/103 (78.64%), Query Frame = 3 Query: 144 CCAKGPGYAPPLDAMSGPREKLLYVTCLYTGTGREKPDYLATVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDSSAXRRFLVLPFLVSGRIYIV 452 C GPGY PL+AM GPRE+++Y+ C+Y TG E PDYLATVD DP S YS+VIHRLP+PY+ DELHHSGWN+CSSC+GDS+ R L+LP L+S RIY+V Sbjct: 5 CTKCGPGYPTPLEAMKGPREEIVYLPCIYRNTGTEAPDYLATVDVDPKSPQYSQVIHRLPMPYLKDELHHSGWNTCSSCFGDSTKSRNKLILPGLISSRIYVV 107
BLAST of FC921407 vs. ExPASy Swiss-Prot
Match: SBP1_XENTR (Selenium-binding protein 1 OS=Xenopus tropicalis GN=selenbp1 PE=2 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 9.841e-37 Identity = 67/103 (65.05%), Postives = 80/103 (77.67%), Query Frame = 3 Query: 144 CCAKGPGYAPPLDAMSGPREKLLYVTCLYTGTGREKPDYLATVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDSSAXRRFLVLPFLVSGRIYIV 452 C + GPGY PLDAM GPRE++LY+ C+Y TG KPDYLATVD +P S YS+VIHRLP+P DELHHSGWN+CSSCYGD+S R L+LP L+S RIY+V Sbjct: 4 CGSCGPGYKTPLDAMKGPREEILYLPCIYRNTGINKPDYLATVDVNPKSPKYSQVIHRLPMPNTNDELHHSGWNTCSSCYGDASKVRNKLILPCLISSRIYVV 106
BLAST of FC921407 vs. ExPASy Swiss-Prot
Match: SBP1_RAT (Selenium-binding protein 1 OS=Rattus norvegicus GN=Selenbp1 PE=1 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 1.679e-36 Identity = 65/103 (63.11%), Postives = 82/103 (79.61%), Query Frame = 3 Query: 144 CCAKGPGYAPPLDAMSGPREKLLYVTCLYTGTGREKPDYLATVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDSSAXRRFLVLPFLVSGRIYIV 452 C GPGYA PL+AM GPRE+++Y+ C+Y TG E PDYLATVD DP S YS+VIHRLP+P++ DELHHSGWN+CSSC+GDS+ R L+LP ++S RIY+V Sbjct: 5 CTKCGPGYATPLEAMKGPREEIVYLPCIYRNTGIEAPDYLATVDVDPKSPHYSQVIHRLPMPHLKDELHHSGWNTCSSCFGDSTKSRDKLILPSIISSRIYVV 107
BLAST of FC921407 vs. ExPASy Swiss-Prot
Match: SBP1_PONAB (Selenium-binding protein 1 OS=Pongo abelii GN=SELENBP1 PE=2 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 1.421e-35 Identity = 65/103 (63.11%), Postives = 80/103 (77.67%), Query Frame = 3 Query: 144 CCAKGPGYAPPLDAMSGPREKLLYVTCLYTGTGREKPDYLATVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDSSAXRRFLVLPFLVSGRIYIV 452 C GPGY+ PL+AM GPRE+++Y+ C+Y TG E PDYLATVD DP S Y +VIHRLP+P + DELHHSGWN+CSSC+GDS+ R LVLP L+S RIY+V Sbjct: 5 CGNCGPGYSTPLEAMKGPREEIVYLPCIYRNTGTEAPDYLATVDVDPKSPQYCQVIHRLPMPNLKDELHHSGWNTCSSCFGDSTKSRTKLVLPSLISSRIYVV 107
BLAST of FC921407 vs. ExPASy Swiss-Prot
Match: SBP1_HUMAN (Selenium-binding protein 1 OS=Homo sapiens GN=SELENBP1 PE=1 SV=2) HSP 1 Score: 148.288 bits (373), Expect = 1.421e-35 Identity = 65/103 (63.11%), Postives = 80/103 (77.67%), Query Frame = 3 Query: 144 CCAKGPGYAPPLDAMSGPREKLLYVTCLYTGTGREKPDYLATVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDSSAXRRFLVLPFLVSGRIYIV 452 C GPGY+ PL+AM GPRE+++Y+ C+Y TG E PDYLATVD DP S Y +VIHRLP+P + DELHHSGWN+CSSC+GDS+ R LVLP L+S RIY+V Sbjct: 5 CGNCGPGYSTPLEAMKGPREEIVYLPCIYRNTGTEAPDYLATVDVDPKSPQYCQVIHRLPMPNLKDELHHSGWNTCSSCFGDSTKSRTKLVLPSLISSRIYVV 107
BLAST of FC921407 vs. ExPASy Swiss-Prot
Match: SBP1_BOVIN (Selenium-binding protein 1 OS=Bos taurus GN=SELENBP1 PE=1 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 3.166e-35 Identity = 65/103 (63.11%), Postives = 81/103 (78.64%), Query Frame = 3 Query: 147 CAK-GPGYAPPLDAMSGPREKLLYVTCLYTGTGREKPDYLATVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDSSAXRRFLVLPFLVSGRIYIV 452 C K GPGY PL+AM GPRE+L+Y+ C+Y TG E PDYLATVD +P S YS+VIHRLP+P + DELHHSGWN+CSSC+GDS+ R L+LP L+S R+Y+V Sbjct: 5 CGKCGPGYPSPLEAMKGPREELVYLPCIYRNTGTEAPDYLATVDVNPKSPQYSQVIHRLPMPNLKDELHHSGWNTCSSCFGDSTKSRTKLLLPSLISSRVYVV 107 The following BLAST results are available for this feature:
BLAST of FC921407 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921407 ID=FC921407; Name=FC921407; organism=Citrus clementina; type=EST; length=452bpback to top |