FC921459
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921459 vs. ExPASy Swiss-Prot
Match: SCAM4_ARATH (Secretory carrier-associated membrane protein 4 OS=Arabidopsis thaliana GN=SCAMP4 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.105e-17 Identity = 43/74 (58.11%), Postives = 53/74 (71.62%), Query Frame = 1 Query: 121 MNRHHDPNPFDEEE--VNPFSNGPAAPASRSQVPSVTSEPIGFGQKYGATVDIPLDNMNEPKKKERELASWEAD 336 MNRHHDPNPFDE+E VNPFS G +VP+ S P+ +GQ ATVDIPLDNMN+ +K+R+LA WEA+ Sbjct: 1 MNRHHDPNPFDEDEEIVNPFSKGGG------RVPAA-SRPVEYGQSLDATVDIPLDNMNDSSQKQRKLADWEAE 67
BLAST of FC921459 vs. ExPASy Swiss-Prot
Match: SCAM2_ORYSJ (Secretory carrier-associated membrane protein 2 OS=Oryza sativa subsp. japonica GN=SCAMP2 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 5.524e-14 Identity = 38/72 (52.78%), Postives = 50/72 (69.44%), Query Frame = 1 Query: 121 MNRHHDPNPFDEEEVNPFSNGPAAPASRSQVPSVTSEPIGFGQKYGATVDIPLDNMNEPKKKERELASWEAD 336 M +D NPFDE++VNPF+ G PAS S++P + EP GF GATVDIPLD+ + KKKE+EL + EA+ Sbjct: 1 MAGRYDRNPFDEDDVNPFAGGSVPPASNSRMPPLPHEP-GFYNDRGATVDIPLDSTKDMKKKEKELQAKEAE 71
BLAST of FC921459 vs. ExPASy Swiss-Prot
Match: SCAM6_ORYSJ (Secretory carrier-associated membrane protein 6 OS=Oryza sativa subsp. japonica GN=SCAMP6 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.741e-13 Identity = 41/75 (54.67%), Postives = 45/75 (60.00%), Query Frame = 1 Query: 130 HHDPNPFDEEEV--NPFSNGPAAPA---SRSQVPSVTSEPIGFGQKYG-ATVDIPLDNMNEPKKKERELASWEAD 336 HHDPNPFDE NPFSNG SR Q +EP GFG G ATVD+PLD M + K K REL+SWE D Sbjct: 2 HHDPNPFDEGNADDNPFSNGGGGGGGGGSRQQYGFRPTEPAGFGAGRGDATVDVPLDTMGDSKSKARELSSWETD 76
BLAST of FC921459 vs. ExPASy Swiss-Prot
Match: SCAM_PEA (Secretory carrier-associated membrane protein OS=Pisum sativum GN=PSAM2 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 1.965e-11 Identity = 35/73 (47.95%), Postives = 47/73 (64.38%), Query Frame = 1 Query: 121 MNRHHDPNPFDEEEVNPFSN-GPAAPASRSQVPSVTSEPIGFGQKYGATVDIPLDNMNEPKKKERELASWEAD 336 M +DPNPFDEE+VNPFSN AA A+ S+ + + + +G TVDIPLD + KKKER+L + EA+ Sbjct: 1 MAGRYDPNPFDEEQVNPFSNPRSAASATNSRPAPLNPDRADYNYGFGPTVDIPLDTSTDGKKKERDLQAKEAE 73
BLAST of FC921459 vs. ExPASy Swiss-Prot
Match: SCAM5_ORYSJ (Secretory carrier-associated membrane protein 5 OS=Oryza sativa subsp. japonica GN=SCAMP5 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 1.965e-11 Identity = 42/84 (50.00%), Postives = 47/84 (55.95%), Query Frame = 1 Query: 130 HHDPNPFDE-EEVNPFSNGPAAPASR--------------SQVPSVTSEPIGFGQKYGATVDIPLDNMNEPKKKERELASWEAD 336 HHDPNPFDE + NPFSNG A R SQ S +G G K GATVDIPLDNM++ K K +EL WEAD Sbjct: 2 HHDPNPFDEGADDNPFSNGGGGGARRGGGGGGGGGGGGGKSQF-SFGFGGLGGGSKGGATVDIPLDNMSDSKGKGKELLQWEAD 84
BLAST of FC921459 vs. ExPASy Swiss-Prot
Match: SCAM3_ARATH (Secretory carrier-associated membrane protein 3 OS=Arabidopsis thaliana GN=SCAMP3 PE=1 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.377e-11 Identity = 39/76 (51.32%), Postives = 50/76 (65.79%), Query Frame = 1 Query: 121 MNRHHDPNPF-DEEEVNPFSNGPAAP-ASRSQVPSVTSEPIGFGQKYGATVDIPLDNMN--EPKKKERELASWEAD 336 M +DPNPF +EEEVNPF+N P AS S++ + EP+GF YG TVDIPLD + KKKE+EL + EA+ Sbjct: 1 MANRYDPNPFAEEEEVNPFANARGVPPASNSRLSPLPPEPVGFD--YGRTVDIPLDRAGTQDLKKKEKELQAKEAE 74 The following BLAST results are available for this feature:
BLAST of FC921459 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC921459 ID=FC921459; Name=FC921459; organism=Citrus clementina; type=EST; length=365bpback to top |