FC921468
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921468 vs. ExPASy Swiss-Prot
Match: WDR89_DICDI (WD repeat-containing protein 89 homolog OS=Dictyostelium discoideum GN=wdr89 PE=4 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.322e-19 Identity = 70/205 (34.15%), Postives = 100/205 (48.78%), Query Frame = 1 Query: 103 DNVNSIKRFGLKNSI---QTNFGDDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQ-EIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHAEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVIMWERPXG 705 D + S F NSI + GDD + + +L+A + S ++K+Y GH +N+ F + L SCSSD T++ WDT++ S T Q EIF G +LA G GS + ++ KK + + SH EDVT+V F P ++NK+VS SVDGLIC +D +DDD + VI E G Sbjct: 2 DQLISQLNFKSHNSIIHSVDSIGDDTCYVLDLSVTPNLLAAAGSNYLIKIYDRSNNTILNVLSGHKDAINETKFI--ENTNTLLSCSSDKTVKIWDTKTGQ--CSQTINQQGEIFSIDLNGD---ILAMGVGSMVVLYNLSTKKMIRKFDCSHTEDVTRVRFHPIDKNKLVSCSVDGLICMYDL-EQADDDDAIVHVINAEDSIG 198
BLAST of FC921468 vs. ExPASy Swiss-Prot
Match: WDR89_RAT (WD repeat-containing protein 89 OS=Rattus norvegicus GN=Wdr89 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.414e-13 Identity = 54/177 (30.51%), Postives = 82/177 (46.33%), Query Frame = 1 Query: 184 VPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWS-VTAGSQEIFCFSFG-GSTDYLLAAGC-----GSQIQFWDWRNKKQ-------VACLEESHAEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLL 672 VP L+AV S +++Y T E G +N + F+ ++S S+DGT++ WD R E + + G SF D+++ AG + + FWD R Q + E+H++D+TQV F P+N N VVS S DGL+ FD D +D L+ Sbjct: 35 VPAEKGGLVAVLCSNGSIRIYDKETLNLLREFSGSPGLLNGVRFANSCDN--VYSASTDGTVKCWDARLASEKPAQLFKGYPSNIFISFDVNCKDHIICAGAEKVEDDALLVFWDARFTSQDLSTRDPLGAYSETHSDDITQVRFHPSNPNMVVSGSTDGLVNVFDLSVDNEEDALV 209
BLAST of FC921468 vs. ExPASy Swiss-Prot
Match: WDR89_BOVIN (WD repeat-containing protein 89 OS=Bos taurus GN=WDR89 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.118e-13 Identity = 62/204 (30.39%), Postives = 92/204 (45.10%), Query Frame = 1 Query: 106 NVNSIKRFGLKNSIQTNFGDDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTR--SFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGC-----GSQIQFWDWR--------NKKQVACLEESHAEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLL 672 N+N +KR G D + V SL+AV S ++++ E +G+ +N + F+ S V SC+ DGT++ WD R S V IF S D+++ AG + + FWD R K+ + E+H++D+TQV F P+N N VVS S DGL+ FD D DD L+ Sbjct: 10 NLNIVKRSSETKEPTYLLGID-TSKTVQTEKGSLVAVLCSNGSIRIHDKERLNVIREFRGYPG-LNGVKFAN-SHDSVYSSCT-DGTVKCWDARLASGKPVQLFKGYPSNIFISFDISSNDHVICAGTEKVDDDALLVFWDARINSQDLSTTKEPLGAYSETHSDDITQVRFHPSNPNMVVSGSTDGLVNVFDISADNEDDALV 209
BLAST of FC921468 vs. ExPASy Swiss-Prot
Match: WDR89_MOUSE (WD repeat-containing protein 89 OS=Mus musculus GN=Wdr89 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.175e-13 Identity = 52/170 (30.59%), Postives = 80/170 (47.06%), Query Frame = 1 Query: 205 LMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEV-WSVTAGSQEIFCFSFG-GSTDYLLAAGC-----GSQIQFWDWRNKKQ-------VACLEESHAEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLL 672 L+AV S +++Y T E G ++ +SF+ ++S S+DGT++ WD R E + G SF D+++ AG + + FWD R Q + E+H++D+TQV F P+N N VVS S DGL+ FD D +D L+ Sbjct: 42 LVAVLCSNGSIRIYDKETLHLLREFGGSPGLLSGVSFANSCDS--VYSASTDGTVKCWDARGASEKPVQLFKGYPSCSFISFDVNCKDHVICAGAEKVDEDALLVFWDARFTSQDLSTRDPLGAYSETHSDDITQVRFHPSNPNLVVSGSTDGLVNVFDLSADKEEDALV 209
BLAST of FC921468 vs. ExPASy Swiss-Prot
Match: WDR89_HUMAN (WD repeat-containing protein 89 OS=Homo sapiens GN=WDR89 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.669e-12 Identity = 51/172 (29.65%), Postives = 78/172 (45.35%), Query Frame = 1 Query: 202 SLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHE--VWSVTAGSQEIFCFSFGGSTDYLLAAGC-----GSQIQFWDWR--------NKKQVACLEESHAEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLL 672 +L+AV S +++Y E G+ +N + F+ ++S +DGT++ WD R E V IF D+++ AG + + FWD R K + E+H++DVTQV F P+N N VVS S DGL+ FD D +D L+ Sbjct: 41 NLVAVLCSNGSIRIYDKERLNVLREFSGYPGLLNGVRFANSCDS--VYSACTDGTVKCWDARVAREKPVQLFKGYPSNIFISFDINCNDHIICAGTEKVDDDALLVFWDARMNSQNLSTTKDSLGAYSETHSDDVTQVRFHPSNPNMVVSGSSDGLVNVFDINIDNEEDALV 210
BLAST of FC921468 vs. ExPASy Swiss-Prot
Match: WDR89_PONAB (WD repeat-containing protein 89 OS=Pongo abelii GN=WDR89 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.486e-12 Identity = 51/172 (29.65%), Postives = 78/172 (45.35%), Query Frame = 1 Query: 202 SLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHE--VWSVTAGSQEIFCFSFGGSTDYLLAAGC-----GSQIQFWDWRNKKQ--------VACLEESHAEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLL 672 +L+AV S +++Y E G+ +N + F+ ++S +DGT++ WD R E V IF D+++ AG + + FWD R Q + E+H++DVTQV F P+N N VVS S DGL+ FD D +D L+ Sbjct: 41 NLVAVLCSNGSIRIYDKERLSVLREFSGYPGLLNGVRFANSCDS--VYSACTDGTVKCWDARVAREKPVQLFKGYPSNIFISFDINCNDHIICAGTEKVDDDALLVFWDARMNSQDLSTTKDPLGAYSETHSDDVTQVRFHPSNPNMVVSGSSDGLVNVFDINIDNEEDALV 210
BLAST of FC921468 vs. ExPASy Swiss-Prot
Match: WDR5_XENTR (WD repeat-containing protein 5 OS=Xenopus tropicalis GN=wdr5 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.575e-11 Identity = 39/152 (25.66%), Postives = 80/152 (52.63%), Query Frame = 1 Query: 187 PKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHAEDVTQVHFVPNNQNKVVSASVDGLICTFDT 642 P +W +A S + ++K++ G++ GH ++ +++S S ++L S S D T++ WD S + ++ S +FC +F ++ +++ ++ WD + K + L +H++ V+ VHF + + +VS+S DGL +DT Sbjct: 55 PNGEW--LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS--NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTL-PAHSDPVSAVHF-NRDGSLIVSSSYDGLCRIWDT 200
BLAST of FC921468 vs. ExPASy Swiss-Prot
Match: WDR5_RAT (WD repeat-containing protein 5 OS=Rattus norvegicus GN=Wdr5 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.575e-11 Identity = 39/152 (25.66%), Postives = 80/152 (52.63%), Query Frame = 1 Query: 187 PKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHAEDVTQVHFVPNNQNKVVSASVDGLICTFDT 642 P +W +A S + ++K++ G++ GH ++ +++S S ++L S S D T++ WD S + ++ S +FC +F ++ +++ ++ WD + K + L +H++ V+ VHF + + +VS+S DGL +DT Sbjct: 55 PNGEW--LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS--NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTL-PAHSDPVSAVHF-NRDGSLIVSSSYDGLCRIWDT 200
BLAST of FC921468 vs. ExPASy Swiss-Prot
Match: WDR5_MOUSE (WD repeat-containing protein 5 OS=Mus musculus GN=Wdr5 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.575e-11 Identity = 39/152 (25.66%), Postives = 80/152 (52.63%), Query Frame = 1 Query: 187 PKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHAEDVTQVHFVPNNQNKVVSASVDGLICTFDT 642 P +W +A S + ++K++ G++ GH ++ +++S S ++L S S D T++ WD S + ++ S +FC +F ++ +++ ++ WD + K + L +H++ V+ VHF + + +VS+S DGL +DT Sbjct: 55 PNGEW--LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS--NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTL-PAHSDPVSAVHF-NRDGSLIVSSSYDGLCRIWDT 200
BLAST of FC921468 vs. ExPASy Swiss-Prot
Match: WDR5_HUMAN (WD repeat-containing protein 5 OS=Homo sapiens GN=WDR5 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.575e-11 Identity = 39/152 (25.66%), Postives = 80/152 (52.63%), Query Frame = 1 Query: 187 PKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHAEDVTQVHFVPNNQNKVVSASVDGLICTFDT 642 P +W +A S + ++K++ G++ GH ++ +++S S ++L S S D T++ WD S + ++ S +FC +F ++ +++ ++ WD + K + L +H++ V+ VHF + + +VS+S DGL +DT Sbjct: 55 PNGEW--LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS--NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTL-PAHSDPVSAVHF-NRDGSLIVSSSYDGLCRIWDT 200 The following BLAST results are available for this feature:
BLAST of FC921468 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921468 ID=FC921468; Name=FC921468; organism=Citrus clementina; type=EST; length=706bpback to top |