FC921484
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC921484 vs. ExPASy Swiss-Prot
Match: KPPR_MESCR (Phosphoribulokinase, chloroplastic OS=Mesembryanthemum crystallinum PE=2 SV=1) HSP 1 Score: 254.218 bits (648), Expect = 4.953e-67 Identity = 130/164 (79.27%), Postives = 140/164 (85.37%), Query Frame = 3 Query: 183 PTKSHLGFFNNQRQLAVFYNKRXXXXXXXXKQRGCLVITCSAGDSQTIVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDYHSLDRTGRKEKGVTALDPRANNFDLMYEQVKAMKDGVSVEKPIYNHVTGLLDPPELISPPRSL 674 PT SHLGF N ++QL F+ + R C VITC AGDSQTIVIGLAADSGCGKSTFMRRLTSVFGGAAEPP+GGNPDSNTLISDTTTVICLDDYHSLDRTGRKEKGVTALDPRAN+FDLMYEQVKA+K+G +VEKPIYNHVTGLLD PELI PP+ L Sbjct: 9 PTTSHLGF-NQKKQL--FFCNKSAYKRVSFSSRPC-VITCLAGDSQTIVIGLAADSGCGKSTFMRRLTSVFGGAAEPPRGGNPDSNTLISDTTTVICLDDYHSLDRTGRKEKGVTALDPRANDFDLMYEQVKALKEGKAVEKPIYNHVTGLLDAPELIKPPKIL 168
BLAST of FC921484 vs. ExPASy Swiss-Prot
Match: KPPR_SPIOL (Phosphoribulokinase, chloroplastic OS=Spinacia oleracea PE=1 SV=1) HSP 1 Score: 234.958 bits (598), Expect = 3.110e-61 Identity = 121/172 (70.35%), Postives = 137/172 (79.65%), Query Frame = 3 Query: 168 CSLYS-PTKSHLGFFNNQRQLAVFYN--KRXXXXXXXXKQRGCLVITCSAGDSQTIVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDYHSLDRTGRKEKGVTALDPRANNFDLMYEQVKAMKDGVSVEKPIYNHVTGLLDPPELISPPRSL 674 C++Y+ PT +HLG NQ VF+N + R VITCS QTIVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDD+HSLDR GRK + VTALDP+AN+FDLMYEQVKA+K+G +V+KPIYNHV+GLLDPPELI PP+ L Sbjct: 4 CTVYTIPTTTHLGSSFNQNNKQVFFNYKRSSSSNNTLFTTRPSYVITCS--QQQTIVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDFHSLDRNGRKVEKVTALDPKANDFDLMYEQVKALKEGKAVDKPIYNHVSGLLDPPELIQPPKIL 173
BLAST of FC921484 vs. ExPASy Swiss-Prot
Match: KPPR_WHEAT (Phosphoribulokinase, chloroplastic OS=Triticum aestivum PE=2 SV=1) HSP 1 Score: 230.335 bits (586), Expect = 7.659e-60 Identity = 119/172 (69.19%), Postives = 133/172 (77.33%), Query Frame = 3 Query: 153 SLNSPCSLYSPTKSHLGFFNNQRQLAVFYNKRXXXXXXXXKQRGCLVITCSAGDSQTIVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDYHSLDRTGRKEKGVTALDPRANNFDLMYEQVKAMKDGVSVEKPIYNHVTGLLDPPELISPPR 668 SL SPC+ T + GF NQ +F+ R ++C+ Q IVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDYHSLDRTGRKEKGVTALDP+AN+FDLMYEQVKA+K+G ++EKPIYNHVTGLLDP ELI PP+ Sbjct: 11 SLRSPCT----TIPNSGFRQNQ---VIFFTTRSSRRSNTRHGARTFQVSCAV--EQPIVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDYHSLDRTGRKEKGVTALDPKANDFDLMYEQVKAIKEGKAIEKPIYNHVTGLLDPAELIQPPK 173
BLAST of FC921484 vs. ExPASy Swiss-Prot
Match: KPPR_ARATH (Phosphoribulokinase, chloroplastic OS=Arabidopsis thaliana GN=At1g32060 PE=1 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 4.203e-58 Identity = 109/128 (85.16%), Postives = 120/128 (93.75%), Query Frame = 3 Query: 291 VITCSAGDSQTIVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDYHSLDRTGRKEKGVTALDPRANNFDLMYEQVKAMKDGVSVEKPIYNHVTGLLDPPELISPPRSL 674 +ITC+ +TIVIGLAADSGCGKSTFMRRLTSVFGGAA+PPKGGNPDSNTLISDTTTVICLDDYHSLDR GRKE+ VTALDPRAN+FDLMYEQVKA+K+G++VEKPIYNHVTGLLDPPELI PP+ L Sbjct: 43 LITCA---QETIVIGLAADSGCGKSTFMRRLTSVFGGAAKPPKGGNPDSNTLISDTTTVICLDDYHSLDRYGRKEQKVTALDPRANDFDLMYEQVKALKNGIAVEKPIYNHVTGLLDPPELIQPPKIL 167
BLAST of FC921484 vs. ExPASy Swiss-Prot
Match: KPPR_CHLRE (Phosphoribulokinase, chloroplastic OS=Chlamydomonas reinhardtii GN=PRKA PE=1 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.537e-50 Identity = 91/120 (75.83%), Postives = 101/120 (84.17%), Query Frame = 3 Query: 306 AGDSQTIVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDYHSLDRTGRKEKGVTALDPRANNFDLMYEQVKAMKDGVSVEKPIYNHVTGLLDPPELISPP 665 A +T+VIGLAADSGCGKSTFMRR+TS+FGG +PP GGNPDSNTLISD TTVICLDDYH LDR GRK KGVTAL P A NFDLMY QVKA+K+G SV+KPIYNHV+GL+D PE I P Sbjct: 31 ADKDKTVVIGLAADSGCGKSTFMRRMTSIFGGVPKPPAGGNPDSNTLISDMTTVICLDDYHCLDRNGRKVKGVTALAPEAQNFDLMYNQVKALKEGKSVDKPIYNHVSGLIDAPEKIESP 150 HSP 2 Score: 28.4906 bits (62), Expect = 1.537e-50 Identity = 12/20 (60.00%), Postives = 13/20 (65.00%), Query Frame = 2 Query: 644 PRAHQPPKILVIEXLHPMYD 703 P + P ILVIE LHP YD Sbjct: 144 PEKIESPPILVIEGLHPFYD 163
BLAST of FC921484 vs. ExPASy Swiss-Prot
Match: KPPR_SYNY3 (Phosphoribulokinase OS=Synechocystis sp. (strain PCC 6803) GN=prk PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 4.045e-38 Identity = 71/115 (61.74%), Postives = 82/115 (71.30%), Query Frame = 3 Query: 318 QTIVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDYHSLDRTGRKEKGVTALDPRANNFDLMYEQVKAMKDGVSVEKPIYNHVTGLLDPPELISP 662 + ++IG+A DSGCGKSTF+RRLT +FG + TVICLDDYHSLDR GRK GVTALDPRANNFDLMYEQ+K +K G S+ KPIYNH TGLLDPPE + P Sbjct: 7 RVVLIGVAGDSGCGKSTFLRRLTDLFG-----------------EEFMTVICLDDYHSLDRQGRKAAGVTALDPRANNFDLMYEQIKTLKSGQSIMKPIYNHETGLLDPPEKVEP 104 HSP 2 Score: 33.4982 bits (75), Expect = 4.045e-38 Identity = 13/23 (56.52%), Postives = 17/23 (73.91%), Query Frame = 2 Query: 635 LGPPRAHQPPKILVIEXLHPMYD 703 L PP +P K++VIE LHP+YD Sbjct: 96 LDPPEKVEPNKVVVIEGLHPLYD 118
BLAST of FC921484 vs. ExPASy Swiss-Prot
Match: KPPR_VITSX (Phosphoribulokinase, chloroplastic (Fragments) OS=Vitis sp. PE=1 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 9.450e-26 Identity = 58/66 (87.88%), Postives = 60/66 (90.91%), Query Frame = 3 Query: 381 LTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDYHSLDRTGRKEKGVTALDPRANNFDLMYEQVK 578 LTSVFGGAAEPP+GGNPDSNTLISDTTTVICLDDYHSLDR GVTALDPRAN+FDLMYEQVK Sbjct: 1 LTSVFGGAAEPPRGGNPDSNTLISDTTTVICLDDYHSLDR------GVTALDPRANDFDLMYEQVK 60 The following BLAST results are available for this feature:
BLAST of FC921484 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC921484 ID=FC921484; Name=FC921484; organism=Citrus clementina; type=EST; length=707bpback to top |