FC921674
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921674 vs. ExPASy Swiss-Prot
Match: IDI2_CAMAC (Isopentenyl-diphosphate Delta-isomerase II OS=Camptotheca acuminata GN=IPI2 PE=2 SV=1) HSP 1 Score: 258.07 bits (658), Expect = 3.576e-80 Identity = 124/140 (88.57%), Postives = 130/140 (92.86%), Query Frame = 1 Query: 220 MGDATTDAGMDAVQRRLMFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICVEDVPVDEFTPLGRILYR 639 MGD TDAGMDAVQRRLMFEDECILVDEND VVGH+ KYNCHLMEKIES NLLHRAFSVFLFNSKYELLLQQRS TKVTFPLVWTNTCCSHP YRESEL++ENALGVRNAAQRKLLDELGI EDVPVD+F PLGR+LY+ Sbjct: 75 MGDTATDAGMDAVQRRLMFEDECILVDENDHVVGHDTKYNCHLMEKIESDNLLHRAFSVFLFNSKYELLLQQRSATKVTFPLVWTNTCCSHPRYRESELVDENALGVRNAAQRKLLDELGIPAEDVPVDQFIPLGRMLYK 214 HSP 2 Score: 62.003 bits (149), Expect = 3.576e-80 Identity = 25/30 (83.33%), Postives = 29/30 (96.67%), Query Frame = 3 Query: 636 QAPSDGKWGEHELDYLLFTVRDVSVYPNPD 725 +APSDGKWGEHELDYLLF +RDV+V+PNPD Sbjct: 214 KAPSDGKWGEHELDYLLFIIRDVNVHPNPD 243
BLAST of FC921674 vs. ExPASy Swiss-Prot
Match: IDI1_CAMAC (Isopentenyl-diphosphate Delta-isomerase I OS=Camptotheca acuminata GN=IPI1 PE=2 SV=1) HSP 1 Score: 259.225 bits (661), Expect = 3.584e-80 Identity = 125/140 (89.29%), Postives = 131/140 (93.57%), Query Frame = 1 Query: 220 MGDATTDAGMDAVQRRLMFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICVEDVPVDEFTPLGRILYR 639 MGDA TDAGMDAVQ+RLMFED+CILVDEND VVGH+ KYNCHLMEKIES NLLHRAFSVFLFNSKYELLLQQRS TKVTFPLVWTNTCCSHPLYRESELI+ENALG RNAAQRKLLDELGI EDVPVD+F PLGRILY+ Sbjct: 1 MGDAATDAGMDAVQKRLMFEDKCILVDENDNVVGHDTKYNCHLMEKIESENLLHRAFSVFLFNSKYELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIKENALGARNAAQRKLLDELGIPAEDVPVDQFIPLGRILYK 140 HSP 2 Score: 60.8474 bits (146), Expect = 3.584e-80 Identity = 26/30 (86.67%), Postives = 28/30 (93.33%), Query Frame = 3 Query: 636 QAPSDGKWGEHELDYLLFTVRDVSVYPNPD 725 +APSDGKWGEHELDYLLF VRDV+V PNPD Sbjct: 140 KAPSDGKWGEHELDYLLFIVRDVNVNPNPD 169
BLAST of FC921674 vs. ExPASy Swiss-Prot
Match: IDI2_ARATH (Isopentenyl-diphosphate Delta-isomerase II OS=Arabidopsis thaliana GN=IPP2 PE=2 SV=1) HSP 1 Score: 254.603 bits (649), Expect = 8.675e-79 Identity = 122/136 (89.71%), Postives = 129/136 (94.85%), Query Frame = 1 Query: 232 TTDAGMDAVQRRLMFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICVEDVPVDEFTPLGRILYR 639 T DAGMDAVQRRLMFEDECILVDE DRVVGH++KYNCHLME IE+ NLLHRAFSVFLFNSKYELLLQQRS TKVTFPLVWTNTCCSHPLYRESELI++NALGVRNAAQRKLLDELGI EDVPVDEFTPLGR+LY+ Sbjct: 55 TKDAGMDAVQRRLMFEDECILVDETDRVVGHDSKYNCHLMENIEAKNLLHRAFSVFLFNSKYELLLQQRSNTKVTFPLVWTNTCCSHPLYRESELIQDNALGVRNAAQRKLLDELGIVAEDVPVDEFTPLGRMLYK 190 HSP 2 Score: 60.8474 bits (146), Expect = 8.675e-79 Identity = 26/30 (86.67%), Postives = 27/30 (90.00%), Query Frame = 3 Query: 636 QAPSDGKWGEHELDYLLFTVRDVSVYPNPD 725 +APSDGKWGEHELDYLLF VRDV V PNPD Sbjct: 190 KAPSDGKWGEHELDYLLFIVRDVKVQPNPD 219
BLAST of FC921674 vs. ExPASy Swiss-Prot
Match: IDI1_ARATH (Isopentenyl-diphosphate Delta-isomerase I OS=Arabidopsis thaliana GN=IPP1 PE=2 SV=2) HSP 1 Score: 255.373 bits (651), Expect = 2.515e-78 Identity = 123/136 (90.44%), Postives = 128/136 (94.12%), Query Frame = 1 Query: 232 TTDAGMDAVQRRLMFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICVEDVPVDEFTPLGRILYR 639 + DAGMDAVQRRLMFEDECILVDENDRVVGH+ KYNCHLMEKIE+ NLLHRAFSVFLFNSKYELLLQQRS TKVTFPLVWTNTCCSHPLYRESELIEEN LGVRNAAQRKL DELGI EDVPVDEFTPLGR+LY+ Sbjct: 4 SNDAGMDAVQRRLMFEDECILVDENDRVVGHDTKYNCHLMEKIEAENLLHRAFSVFLFNSKYELLLQQRSKTKVTFPLVWTNTCCSHPLYRESELIEENVLGVRNAAQRKLFDELGIVAEDVPVDEFTPLGRMLYK 139 HSP 2 Score: 58.5362 bits (140), Expect = 2.515e-78 Identity = 24/30 (80.00%), Postives = 27/30 (90.00%), Query Frame = 3 Query: 636 QAPSDGKWGEHELDYLLFTVRDVSVYPNPD 725 +APSDGKWGEHE+DYLLF VRDV + PNPD Sbjct: 139 KAPSDGKWGEHEVDYLLFIVRDVKLQPNPD 168
BLAST of FC921674 vs. ExPASy Swiss-Prot
Match: IDI1_CLABR (Isopentenyl-diphosphate Delta-isomerase I OS=Clarkia breweri GN=IPI1 PE=2 SV=2) HSP 1 Score: 253.447 bits (646), Expect = 7.265e-78 Identity = 124/141 (87.94%), Postives = 131/141 (92.91%), Query Frame = 1 Query: 217 TMGDATTDAGMDAVQRRLMFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICVEDVPVDEFTPLGRILYR 639 TMG+ DAGMDAVQRRLMFEDECILVDEND+VVGHE+KYNCHLMEKIES NLLHRAFSVFLFNSKYELLLQQRS TKVTFPLVWTNTCCSHPLYRESELI+EN LGVRNAAQRKLLDELGI ED+PVD+F PL RILY+ Sbjct: 54 TMGEVV-DAGMDAVQRRLMFEDECILVDENDKVVGHESKYNCHLMEKIESENLLHRAFSVFLFNSKYELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIDENCLGVRNAAQRKLLDELGIPAEDLPVDQFIPLSRILYK 193 HSP 2 Score: 58.9214 bits (141), Expect = 7.265e-78 Identity = 24/30 (80.00%), Postives = 28/30 (93.33%), Query Frame = 3 Query: 636 QAPSDGKWGEHELDYLLFTVRDVSVYPNPD 725 +APSDGKWGEHELDYLLF +RDV++ PNPD Sbjct: 193 KAPSDGKWGEHELDYLLFIIRDVNLDPNPD 222
BLAST of FC921674 vs. ExPASy Swiss-Prot
Match: IDI2_CLABR (Isopentenyl-diphosphate Delta-isomerase II OS=Clarkia breweri GN=IPI2 PE=3 SV=2) HSP 1 Score: 246.514 bits (628), Expect = 7.937e-77 Identity = 121/140 (86.43%), Postives = 130/140 (92.86%), Query Frame = 1 Query: 220 MGDATTDAGMDAVQRRLMFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICVEDVPVDEFTPLGRILYR 639 MG+A DAGMDAVQRRLMF+DECILVDE DRVVGHE+KYNCH+ EKIES N+LHRAFSVFLFNSK+ELLLQQRS TKVTFPLVWTNTCCSHPLYRESELI+EN LGVRNAAQRKLLDELGI EDVPVDEFTPL R+LY+ Sbjct: 54 MGEAA-DAGMDAVQRRLMFDDECILVDEVDRVVGHESKYNCHMWEKIESGNMLHRAFSVFLFNSKFELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIDENNLGVRNAAQRKLLDELGIPAEDVPVDEFTPLSRMLYK 192 HSP 2 Score: 62.3882 bits (150), Expect = 7.937e-77 Identity = 26/30 (86.67%), Postives = 29/30 (96.67%), Query Frame = 3 Query: 636 QAPSDGKWGEHELDYLLFTVRDVSVYPNPD 725 +APSDGKWGEHELDYLLF VRDV+V+PNPD Sbjct: 192 KAPSDGKWGEHELDYLLFIVRDVAVHPNPD 221
BLAST of FC921674 vs. ExPASy Swiss-Prot
Match: IDI2_CLAXA (Isopentenyl-diphosphate Delta-isomerase II OS=Clarkia xantiana GN=IPI2 PE=3 SV=1) HSP 1 Score: 246.514 bits (628), Expect = 1.350e-76 Identity = 119/140 (85.00%), Postives = 129/140 (92.14%), Query Frame = 1 Query: 220 MGDATTDAGMDAVQRRLMFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICVEDVPVDEFTPLGRILYR 639 MG+A DAGMDAVQRRLMF+DECILVDE D VVGHE+KYNCHL EKIES N+LHRAF+VFLFNSK+ELLLQQRS TKVTFPLVWTNTCCSHPLYRESELI+EN LGVRNAAQRKLLDELGI EDVPVDEFTP+ R+LY+ Sbjct: 57 MGEAAADAGMDAVQRRLMFDDECILVDEVDCVVGHESKYNCHLWEKIESGNMLHRAFTVFLFNSKFELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIDENNLGVRNAAQRKLLDELGIPAEDVPVDEFTPVSRMLYK 196 HSP 2 Score: 61.6178 bits (148), Expect = 1.350e-76 Identity = 25/30 (83.33%), Postives = 28/30 (93.33%), Query Frame = 3 Query: 636 QAPSDGKWGEHELDYLLFTVRDVSVYPNPD 725 +APSDGKWGEHELDYLLF VRDV ++PNPD Sbjct: 196 KAPSDGKWGEHELDYLLFIVRDVGIHPNPD 225
BLAST of FC921674 vs. ExPASy Swiss-Prot
Match: IDI1_BOVIN (Isopentenyl-diphosphate Delta-isomerase 1 OS=Bos taurus GN=IDI1 PE=2 SV=2) HSP 1 Score: 149.058 bits (375), Expect = 1.533e-40 Identity = 84/140 (60.00%), Postives = 101/140 (72.14%), Query Frame = 1 Query: 220 MGDATTDAGMDAVQRRLMFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICVEDVPVDEFTPLGRILYR 639 M + +TD +D Q +LM E CILVDENDR +G E K NCHL E IE LLHRAFSVFLFN++ +LLLQQRS K+TFP +TNTCCSHPL SEL E +A+GVR AAQR+L ELGI +E+VP +E L RI Y+ Sbjct: 1 MPEVSTD-DLDERQVQLMAE-MCILVDENDRRIGAETKKNCHLNENIER-GLLHRAFSVFLFNTENKLLLQQRSDAKITFPGCFTNTCCSHPLSNPSELEENDAIGVRRAAQRRLKAELGIPMEEVPPEEINYLTRIHYK 137 HSP 2 Score: 38.5058 bits (88), Expect = 1.533e-40 Identity = 14/30 (46.67%), Postives = 23/30 (76.67%), Query Frame = 3 Query: 636 QAPSDGKWGEHELDYLLFTVRDVSVYPNPD 725 +A SD WGEHE+DY+L ++V++ P+P+ Sbjct: 137 KAQSDSIWGEHEIDYILLVKKNVTLNPDPN 166
BLAST of FC921674 vs. ExPASy Swiss-Prot
Match: IDI1_MACFA (Isopentenyl-diphosphate Delta-isomerase 1 OS=Macaca fascicularis GN=IDI1 PE=2 SV=2) HSP 1 Score: 144.821 bits (364), Expect = 1.533e-40 Identity = 81/140 (57.86%), Postives = 98/140 (70.00%), Query Frame = 1 Query: 220 MGDATTDAGMDAVQRRLMFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICVEDVPVDEFTPLGRILYR 639 M + TD +D Q +L+ E CIL+DEND +G E K NCHL E IE LLHRAFSVFLFN++ +LLLQQRS K+TFP +TNTCCSHPL EL E +ALGVR AAQR+L ELGI +E+VP +E L RI Y+ Sbjct: 1 MPEINTDH-LDKQQVQLLAE-MCILIDENDNKIGAETKKNCHLNENIEK-GLLHRAFSVFLFNTENKLLLQQRSDAKITFPGCFTNTCCSHPLSNPGELEENDALGVRRAAQRRLKAELGIPLEEVPPEEINYLTRIHYK 137 HSP 2 Score: 42.743 bits (99), Expect = 1.533e-40 Identity = 16/30 (53.33%), Postives = 25/30 (83.33%), Query Frame = 3 Query: 636 QAPSDGKWGEHELDYLLFTVRDVSVYPNPD 725 +A SDG WGEHE+DY+LF ++V++ P+P+ Sbjct: 137 KAQSDGIWGEHEIDYILFVRKNVTLNPDPN 166
BLAST of FC921674 vs. ExPASy Swiss-Prot
Match: IDI1_HUMAN (Isopentenyl-diphosphate Delta-isomerase 1 OS=Homo sapiens GN=IDI1 PE=1 SV=2) HSP 1 Score: 144.821 bits (364), Expect = 7.498e-40 Identity = 78/131 (59.54%), Postives = 95/131 (72.52%), Query Frame = 1 Query: 247 MDAVQRRLMFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICVEDVPVDEFTPLGRILYR 639 +D Q +L+ E CIL+DEND +G E K NCHL E IE LLHRAFSVFLFN++ +LLLQQRS K+TFP +TNTCCSHPL +EL E +ALGVR AAQR+L ELGI +E+VP +E L RI Y+ Sbjct: 9 LDKQQVQLLAE-MCILIDENDNKIGAETKKNCHLNENIEK-GLLHRAFSVFLFNTENKLLLQQRSDAKITFPGCFTNTCCSHPLSNPAELEESDALGVRRAAQRRLKAELGIPLEEVPPEEINYLTRIHYK 137 HSP 2 Score: 40.4318 bits (93), Expect = 7.498e-40 Identity = 15/30 (50.00%), Postives = 24/30 (80.00%), Query Frame = 3 Query: 636 QAPSDGKWGEHELDYLLFTVRDVSVYPNPD 725 +A SDG WGEHE+DY+L ++V++ P+P+ Sbjct: 137 KAQSDGIWGEHEIDYILLVRKNVTLNPDPN 166 The following BLAST results are available for this feature:
BLAST of FC921674 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921674 ID=FC921674; Name=FC921674; organism=Citrus clementina; type=EST; length=726bpback to top |