FC923674
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923674 vs. ExPASy Swiss-Prot
Match: TRAD1_MACFA (TRAF-type zinc finger domain-containing protein 1 OS=Macaca fascicularis GN=TRAFD1 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 7.446e-18 Identity = 33/101 (32.67%), Postives = 55/101 (54.46%), Query Frame = 2 Query: 233 DETTKICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAPVACSQCSETMEREILAIHKGEKCPQRIVTCDFCEFPLPAVDLAEHQ 535 D+ T++C +C + IP N +H HC RN+ C +C + P+ E H H V C +C++ +E+ +L H+ +CP R+ C C+ L + L EH+ Sbjct: 7 DQETRLCDNCKKEIPVFNFTIHEIHCQRNIGMCPICKEPFPKSDMETHMAAEHCQVTC-KCNKKLEKRLLKKHEETECPLRLAVCQHCDLELSILKLKEHE 106 HSP 2 Score: 27.335 bits (59), Expect = 7.446e-18 Identity = 10/25 (40.00%), Postives = 15/25 (60.00%), Query Frame = 3 Query: 630 EVCGNRTELCHLCNRYIRLRERYNH 704 + CG RTELC C R + +++ H Sbjct: 107 DYCGARTELCGNCGRNVLVKDLKTH 131
BLAST of FC923674 vs. ExPASy Swiss-Prot
Match: TRAD1_HUMAN (TRAF-type zinc finger domain-containing protein 1 OS=Homo sapiens GN=TRAFD1 PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.636e-17 Identity = 33/101 (32.67%), Postives = 54/101 (53.47%), Query Frame = 2 Query: 233 DETTKICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAPVACSQCSETMEREILAIHKGEKCPQRIVTCDFCEFPLPAVDLAEHQ 535 D+ T++C +C + IP N +H HC RN+ C C + P+ E H H V C +C++ +E+ +L H+ +CP R+ C C+ L + L EH+ Sbjct: 7 DQETRLCDNCKKEIPVFNFTIHEIHCQRNIGMCPTCKEPFPKSDMETHMAAEHCQVTC-KCNKKLEKRLLKKHEETECPLRLAVCQHCDLELSILKLKEHE 106 HSP 2 Score: 27.335 bits (59), Expect = 1.636e-17 Identity = 10/25 (40.00%), Postives = 15/25 (60.00%), Query Frame = 3 Query: 630 EVCGNRTELCHLCNRYIRLRERYNH 704 + CG RTELC C R + +++ H Sbjct: 107 DYCGARTELCGNCGRNVLVKDLKTH 131
BLAST of FC923674 vs. ExPASy Swiss-Prot
Match: TRAD1_BOVIN (TRAF-type zinc finger domain-containing protein 1 OS=Bos taurus GN=TRAFD1 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 4.674e-17 Identity = 33/102 (32.35%), Postives = 55/102 (53.92%), Query Frame = 2 Query: 230 SDETTKICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAPVACSQCSETMEREILAIHKGEKCPQRIVTCDFCEFPLPAVDLAEHQ 535 +D+ T++C +C + IP N +H HC RN+ C VC + P+ E H H V C +C++ +E+ L H+ +CP R+ C C+ L + L +H+ Sbjct: 6 NDQDTRLCDNCKKEIPVFNFTIHEIHCQRNIGVCPVCKEPFPKCDMETHMATEHCQVTC-KCNKKLEKRQLKKHEETECPLRLALCQHCDLELSVLKLKDHE 106 HSP 2 Score: 28.1054 bits (61), Expect = 4.674e-17 Identity = 10/25 (40.00%), Postives = 15/25 (60.00%), Query Frame = 3 Query: 630 EVCGNRTELCHLCNRYIRLRERYNH 704 + CG RTELC C R + +++ H Sbjct: 107 DYCGARTELCGTCGRNVLVKDLKTH 131
BLAST of FC923674 vs. ExPASy Swiss-Prot
Match: TRAD1_MOUSE (TRAF-type zinc finger domain-containing protein 1 OS=Mus musculus GN=Trafd1 PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 6.075e-17 Identity = 33/101 (32.67%), Postives = 53/101 (52.48%), Query Frame = 2 Query: 233 DETTKICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAPVACSQCSETMEREILAIHKGEKCPQRIVTCDFCEFPLPAVDLAEHQ 535 D+ +++C +C + IP N +H HC RN+ C VC + P+ + H H V C +C++ +E+ L H +CP R+ C C+ L V L EH+ Sbjct: 7 DQASRLCDNCKKEIPVFNFTIHEIHCQRNIGVCPVCKEPFPKSDMDIHMAAEHCQVTC-KCNKKLEKRQLKQHAETECPLRLAVCQHCDLELSVVKLKEHE 106 HSP 2 Score: 28.8758 bits (63), Expect = 6.075e-17 Identity = 11/25 (44.00%), Postives = 15/25 (60.00%), Query Frame = 3 Query: 630 EVCGNRTELCHLCNRYIRLRERYNH 704 + CG RTELC C R + ++E H Sbjct: 107 DYCGARTELCGSCGRNVLVKELKTH 131
BLAST of FC923674 vs. ExPASy Swiss-Prot
Match: TRAD1_RAT (TRAF-type zinc finger domain-containing protein 1 OS=Rattus norvegicus GN=Trafd1 PE=2 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 6.076e-17 Identity = 33/101 (32.67%), Postives = 52/101 (51.49%), Query Frame = 2 Query: 233 DETTKICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAPVACSQCSETMEREILAIHKGEKCPQRIVTCDFCEFPLPAVDLAEHQ 535 D+ ++C +C + IP N +H HC RN+ C VC + P+ + H H V C +C++ +E+ L H +CP R+ C C+ L V L EH+ Sbjct: 7 DQAARLCDNCKKEIPVFNFTIHEIHCQRNIGVCPVCKEPFPKSDMDIHVATEHCQVTC-KCNKKLEKRQLKQHVETECPLRLAVCQHCDLELSVVKLKEHE 106 HSP 2 Score: 29.261 bits (64), Expect = 6.076e-17 Identity = 11/25 (44.00%), Postives = 15/25 (60.00%), Query Frame = 3 Query: 630 EVCGNRTELCHLCNRYIRLRERYNH 704 + CG RTELC C R + ++E H Sbjct: 107 DYCGARTELCGSCGRNVLVKELQTH 131
BLAST of FC923674 vs. ExPASy Swiss-Prot
Match: XAF1_HUMAN (XIAP-associated factor 1 OS=Homo sapiens GN=XAF1 PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.763e-16 Identity = 34/96 (35.42%), Postives = 52/96 (54.17%), Query Frame = 2 Query: 248 ICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAPVACSQCSETMEREILAIHKGEKCPQRIVTCDFCEFPLPAVDLAEHQ 535 +C +C R + S+N LH A+C R L C C + VP++ EEH H V C+ C ++M++ L HK +C +R V C FC+ + L H+ Sbjct: 7 VCRNCKRHVVSANFTLHEAYCLRFLVLCPECEEPVPKETMEEHCKLEHQQVGCTMCQQSMQKSSLEFHKANECQERPVECKFCKLDMQLSKLELHE 102 HSP 2 Score: 27.7202 bits (60), Expect = 1.763e-16 Identity = 11/23 (47.83%), Postives = 14/23 (60.87%), Query Frame = 3 Query: 636 CGNRTELCHLCNRYIRLRERYNH 704 CG+RTELC C ++I R H Sbjct: 105 CGSRTELCQGCGQFIMHRMLAQH 127
BLAST of FC923674 vs. ExPASy Swiss-Prot
Match: XAF1_BOVIN (XIAP-associated factor 1 OS=Bos taurus GN=XAF1 PE=2 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 1.168e-14 Identity = 34/98 (34.69%), Postives = 53/98 (54.08%), Query Frame = 2 Query: 245 KICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAPVACSQCSETMEREILAIHKGEKCPQRIVTCDFCEFP--LPAVDLAEH 532 ++C +C R + S+++ LH AHC L C C + V + EEH H V C+ C +++ + L H+ ++C +R V C FC+ L VDL EH Sbjct: 6 QVCRNCKRRVASNHLGLHEAHCLMYLVLCPECKEPVLQHEMEEHCQGGHQQVGCAMCQQSVPKHSLDSHEAQECQERPVECQFCQLAVRLNKVDLHEH 103 HSP 2 Score: 26.9498 bits (58), Expect = 1.168e-14 Identity = 10/23 (43.48%), Postives = 14/23 (60.87%), Query Frame = 3 Query: 636 CGNRTELCHLCNRYIRLRERYNH 704 CG +TELC C +++ LR H Sbjct: 105 CGQQTELCPDCGQHVMLRVLARH 127 The following BLAST results are available for this feature:
BLAST of FC923674 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC923674 ID=FC923674; Name=FC923674; organism=Citrus clementina; type=EST; length=709bpback to top |