FC924889
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC924889 vs. ExPASy Swiss-Prot
Match: FACR2_ARATH (Fatty acyl-CoA reductase 2 OS=Arabidopsis thaliana GN=FAR2 PE=2 SV=2) HSP 1 Score: 142.124 bits (357), Expect = 2.473e-33 Identity = 91/201 (45.27%), Postives = 123/201 (61.19%), Query Frame = 3 Query: 135 MGALFLNSLS---VAPNKFVKAFENNCDLCLLRKKRSI----MHCQGGGKTTRSSG------VSPALKERSTVTDTAAGS-------LVLSPNGKGHAEIV--VQDLVPFGGQATSLVELQDGIGIVKFLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFVLIKAKNEEAAMERLKNEIINAELFKCLKQTYGKSYQA 671 M ALFL+S S VA NK + + ++R K+ GGG R+S VS LK+R V S LVLSPNG G + V+ L+PF G S+V +++G+GI+ FL+ K F +TG+TGFLAKVLIEK+LR PDV KI++LIKAK++EAA+ERLKNE+++AELF LK+T+G SY + Sbjct: 1 MEALFLSSSSSSIVASNKLTRLHNHCVWSTVIRDKKRFGPTWCRVGGGGDGGRNSNAERPIRVSSLLKDRGQVLIREQSSPAMDAETLVLSPNGNGRTIEINGVKTLMPFSG--ASMVGMKEGLGIISFLQGKKFLITGSTGFLAKVLIEKVLRMAPDVSKIYLLIKAKSKEAAIERLKNEVLDAELFNTLKETHGASYMS 199
BLAST of FC924889 vs. ExPASy Swiss-Prot
Match: FACR6_ARATH (Fatty acyl-CoA reductase 6, chloroplastic OS=Arabidopsis thaliana GN=FAR6 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 9.749e-22 Identity = 49/80 (61.25%), Postives = 70/80 (87.50%), Query Frame = 3 Query: 432 DGIGIVKFLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFVLIKAKNEEAAMERLKNEIINAELFKCLKQTYGKSYQA 671 DGIGIV+FL+ K++ VTGATGFLAKVLIEK+LR ++GKIF+L+++K++E+A +RL +EII+++LFK LKQ +G SY+A Sbjct: 73 DGIGIVRFLEGKSYLVTGATGFLAKVLIEKLLRESLEIGKIFLLMRSKDQESANKRLYDEIISSDLFKLLKQMHGSSYEA 152
BLAST of FC924889 vs. ExPASy Swiss-Prot
Match: FACR5_ARATH (Probable fatty acyl-CoA reductase 5 OS=Arabidopsis thaliana GN=FAR5 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.181e-15 Identity = 38/73 (52.05%), Postives = 53/73 (72.60%), Query Frame = 3 Query: 438 IGIVKFLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFVLIKAKNEEAAMERLKNEIINAELFKCLKQTYG 656 + V+FL+ K VTGATGFLAKV +EKILR P+V K+++L++A + EAA +RL+ E+ ELFK L+Q G Sbjct: 3 LNCVQFLRNKTILVTGATGFLAKVFVEKILRVQPNVKKLYLLVRASDNEAATKRLRTEVFEKELFKVLRQNLG 75
BLAST of FC924889 vs. ExPASy Swiss-Prot
Match: FACR1_ARATH (Fatty acyl-CoA reductase 1 OS=Arabidopsis thaliana GN=FAR1 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 5.729e-14 Identity = 36/71 (50.70%), Postives = 55/71 (77.46%), Query Frame = 3 Query: 447 VKFLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFVLIKAKNEEAAMERLKNEIINAELFKCLKQTYGK 659 V+FL K +TGA GFLAKVL+EKILR P+V KI++L++A +E++AM+RL++E++ +LFK L+ G+ Sbjct: 6 VQFLGNKTILITGAPGFLAKVLVEKILRLQPNVKKIYLLLRAPDEKSAMQRLRSEVMEIDLFKVLRNNLGE 76
BLAST of FC924889 vs. ExPASy Swiss-Prot
Match: FACR8_ARATH (Fatty acyl-CoA reductase 8 OS=Arabidopsis thaliana GN=FAR8 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.850e-13 Identity = 35/70 (50.00%), Postives = 49/70 (70.00%), Query Frame = 3 Query: 447 VKFLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFVLIKAKNEEAAMERLKNEIINAELFKCLKQTYG 656 V FL+ K VTGATGFLAKV +EKILR P+V K++++++A + EAA +RL+ E +LFK L+ G Sbjct: 6 VHFLQNKTILVTGATGFLAKVFVEKILRVQPNVNKLYLVVRASDNEAATKRLRTEAFEKDLFKVLRDNLG 75
BLAST of FC924889 vs. ExPASy Swiss-Prot
Match: FACR3_ARATH (Fatty acyl-CoA reductase 3 OS=Arabidopsis thaliana GN=FAR3 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.411e-12 Identity = 31/73 (42.47%), Postives = 51/73 (69.86%), Query Frame = 3 Query: 438 IGIVKFLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFVLIKAKNEEAAMERLKNEIINAELFKCLKQTYG 656 + ++K+L K+ V GA GFLA + +EKILR P+V K+++L++A ++A +R +EI+ +LFK LK+ YG Sbjct: 8 VSVLKYLDNKSILVVGAAGFLANIFVEKILRVAPNVKKLYLLLRASKGKSATQRFNDEILKKDLFKVLKEKYG 80
BLAST of FC924889 vs. ExPASy Swiss-Prot
Match: FACR4_ARATH (Probable fatty acyl-CoA reductase 4 OS=Arabidopsis thaliana GN=FAR4 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.105e-12 Identity = 33/70 (47.14%), Postives = 48/70 (68.57%), Query Frame = 3 Query: 447 VKFLKAKNFFVTGATGFLAKVLIEKILRTVPDVGKIFVLIKAKNEEAAMERLKNEIINAELFKCLKQTYG 656 ++FL K VTG GFLAKV +EKILR P V K+F+L++A + E+AM+R +E++ +LF+ LK G Sbjct: 6 IQFLHDKTILVTGVPGFLAKVFVEKILRIQPKVKKLFLLLRAADNESAMQRFHSEVLEKDLFRVLKNALG 75 The following BLAST results are available for this feature:
BLAST of FC924889 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC924889 ID=FC924889; Name=FC924889; organism=Citrus clementina; type=EST; length=671bpback to top |