FC925042
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC925042 vs. ExPASy Swiss-Prot
Match: IPO5_MOUSE (Importin-5 OS=Mus musculus GN=Ipo5 PE=1 SV=3) HSP 1 Score: 154.066 bits (388), Expect = 8.392e-37 Identity = 78/203 (38.42%), Postives = 123/203 (60.59%), Query Frame = 2 Query: 2 VGDCLGTLTKTFRASFLTFFDELSSYLTPMWGKDKTAEERRIAICIFDDVMEHCREAALKYYDTYLPFLLEACNDEHPDVRQAAVYGIGVCAEFGGSVFKPLVGEALSRLDFVIRHPNALHSDNVMAYDNAVSALGKICQFHRDSIDAAQVVPAWLSCLPLKGDLIEAKVVHAQLCSMVERSDGEILGPNHQYLPKIVTIFAE 610 V D L ++ +++ L +F++L + + + +R+ +CIFDD++EHC A+ KY + ++ +L+ D P+VRQAA YG+GV A+FGG ++P +AL L VI+ P A +NV A +N +SA+GKI +F D ++ +V+P WLS LPL D EA + LC ++E + +LGPN+ LPKI +I AE Sbjct: 842 VSDILHSIFSSYKEKVLPWFEQLLPLIVNLICPQRPWPDRQWGLCIFDDIVEHCSPASFKYAEYFISPMLQYVCDNSPEVRQAAAYGLGVMAQFGGDNYRPFCTDALPLLVRVIQAPEAKTKENVNATENCISAVGKIMKFKPDCVNVEEVLPHWLSWLPLHEDKEEAVQTFSYLCDLIESNHPIVLGPNNTNLPKIFSIIAE 1044
BLAST of FC925042 vs. ExPASy Swiss-Prot
Match: IPO5_HUMAN (Importin-5 OS=Homo sapiens GN=IPO5 PE=1 SV=4) HSP 1 Score: 149.828 bits (377), Expect = 1.583e-35 Identity = 78/203 (38.42%), Postives = 122/203 (60.10%), Query Frame = 2 Query: 2 VGDCLGTLTKTFRASFLTFFDELSSYLTPMWGKDKTAEERRIAICIFDDVMEHCREAALKYYDTYLPFLLEACNDEHPDVRQAAVYGIGVCAEFGGSVFKPLVGEALSRLDFVIRHPNALHSDNVMAYDNAVSALGKICQFHRDSIDAAQVVPAWLSCLPLKGDLIEAKVVHAQLCSMVERSDGEILGPNHQYLPKIVTIFAE 610 V D L ++ +++ L +F++L + + + +R+ +CIFDDV+EHC A+ KY + +L +L+ D P+VRQAA YG+GV A++GG ++P EAL L VI+ ++ +NV A +N +SA+GKI +F D ++ +V+P WLS LPL D EA LC ++E + +LGPN+ LPKI +I AE Sbjct: 842 VSDILHSIFSSYKEKVLPWFEQLLPLIVNLICPHRPWPDRQWGLCIFDDVIEHCSPASFKYAEYFLRPMLQYVCDNSPEVRQAAAYGLGVMAQYGGDNYRPFCTEALPLLVRVIQSADSKTKENVNATENCISAVGKIMKFKPDCVNVEEVLPHWLSWLPLHEDKEEAVQTFNYLCDLIESNHPIVLGPNNTNLPKIFSIIAE 1044
BLAST of FC925042 vs. ExPASy Swiss-Prot
Match: RNBP6_HUMAN (Ran-binding protein 6 OS=Homo sapiens GN=RANBP6 PE=1 SV=2) HSP 1 Score: 148.288 bits (373), Expect = 4.605e-35 Identity = 76/203 (37.44%), Postives = 122/203 (60.10%), Query Frame = 2 Query: 2 VGDCLGTLTKTFRASFLTFFDELSSYLTPMWGKDKTAEERRIAICIFDDVMEHCREAALKYYDTYLPFLLEACNDEHPDVRQAAVYGIGVCAEFGGSVFKPLVGEALSRLDFVIRHPNALHSDNVMAYDNAVSALGKICQFHRDSIDAAQVVPAWLSCLPLKGDLIEAKVVHAQLCSMVERSDGEILGPNHQYLPKIVTIFAE 610 V D L +L T++ L +F++L + + + +R+ +CIFDD++EHC + KY + + +L D +P+VRQAA YG+GV A+FGG ++ L EA+ L VI+ N+ NV+A +N +SA+GKI +F + ++ +V+P WLS LPL D EA + LC ++E + ++GPN+ LPKI++I AE Sbjct: 850 VSDILHSLFSTYKEKILPWFEQLLPLIVNLICSSRPWPDRQWGLCIFDDIIEHCSPTSFKYVEYFRWPMLLNMRDNNPEVRQAAAYGLGVMAQFGGDDYRSLCSEAVPLLVKVIKCANSKTKKNVIATENCISAIGKILKFKPNCVNVDEVLPHWLSWLPLHEDKEEAIQTLSFLCDLIESNHPVVIGPNNSNLPKIISIIAE 1052
BLAST of FC925042 vs. ExPASy Swiss-Prot
Match: RNBP6_MOUSE (Ran-binding protein 6 OS=Mus musculus GN=Ranbp6 PE=2 SV=3) HSP 1 Score: 147.132 bits (370), Expect = 1.026e-34 Identity = 76/203 (37.44%), Postives = 121/203 (59.61%), Query Frame = 2 Query: 2 VGDCLGTLTKTFRASFLTFFDELSSYLTPMWGKDKTAEERRIAICIFDDVMEHCREAALKYYDTYLPFLLEACNDEHPDVRQAAVYGIGVCAEFGGSVFKPLVGEALSRLDFVIRHPNALHSDNVMAYDNAVSALGKICQFHRDSIDAAQVVPAWLSCLPLKGDLIEAKVVHAQLCSMVERSDGEILGPNHQYLPKIVTIFAE 610 V D L +L T++ L +F++L + + + +R+ +CIFDD++EHC + KY + + +L D +P+VRQAA YG+GV A+FGG ++ L EA+ L VI+ N+ NV+A +N +SA+GKI +F + ++ +V+P WLS LPL D EA LC ++E + ++GPN+ LPKI++I AE Sbjct: 850 VSDILHSLFSTYKEKILPWFEQLLPLIVNLICSSRPWPDRQWGLCIFDDIIEHCSPTSFKYVEYFRWPMLLNMRDNNPEVRQAAAYGLGVMAQFGGDDYRSLCSEAVPLLVKVIKCANSKTKKNVIATENCISAIGKILKFKPNCVNVDEVLPHWLSWLPLHEDKEEAIQTLNFLCDLIESNHPVVIGPNNSNLPKIISIIAE 1052
BLAST of FC925042 vs. ExPASy Swiss-Prot
Match: IMB3_SCHPO (Importin subunit beta-3 OS=Schizosaccharomyces pombe GN=sal3 PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.699e-21 Identity = 61/210 (29.05%), Postives = 106/210 (50.48%), Query Frame = 2 Query: 2 VGDCLGTLTKTFRASFLTFFDELSSYLTP-MWGKDKTAEERRIAICIFDDVMEHCREAALKYYDTYLPFLLEACNDEHPDVRQAAVYGIGVCAEFGGSVFKPLVGEALSRLDFVIRHPNALHSDNVMAYDNAVSALGKICQFHRDSI-DAAQVVPAWLSCLPLKGDLIEAKVVHAQLCSMVERSDGEILGPNHQYLPKIVTIFAEVLCGG 625 + + K + +F F++ L Y+ + G D A++ A+C+ DD++E + Y D +LP+L E P++RQAA YGIGV A+ GG ++ + AL L ++ P+A + + A +N A+ KIC+F + D +VV W++ LP+ D +A + L ++E++ + +P I+TI AE G Sbjct: 847 INKTFSVVLKIHKTAFCPFWERLLPYMDGFLSGNDTVAKQW--ALCMMDDLIEFTGPDSWNYKDHFLPYLAEGIQSSEPEIRQAASYGIGVAAQHGGELYAEICSSALPALFKMLELPDARDEEQIYATENICVAICKICRFCSQRVQDLDKVVTYWINTLPVTHDEDDAPYAYTFLAELMEQNHVAVA----SQMPTIITILAETFASG 1050
BLAST of FC925042 vs. ExPASy Swiss-Prot
Match: IPO5_DICDI (Probable importin-5 homolog OS=Dictyostelium discoideum GN=DDB_G0291650 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.441e-12 Identity = 53/173 (30.64%), Postives = 91/173 (52.60%), Query Frame = 2 Query: 107 TAEERRIAICIFDDVMEHCREAALKYYDTYL-PFLLEACNDEHPDVRQAAVYGIGVCAEFGGSVFKPLVGEALSRLDFVIRHPNALH---SDNVMAYDNAVSALGKICQFHRDSI--DAAQVVPAWLSCLPLKGDLIEAKVVHAQLCSMVERSDGEILGPNHQYLPKIVTIFA 607 + E + ICI DD++E+ + A + Y + P + + P + Q+AV+GIG+ AE G F P + E+L ++ VI N++ D + A DNA+SA+G+I + + Q + WLS LP++ D EA + LC+++ +I+ QY+ K++ I A Sbjct: 850 SVEIKTSMICILDDLIENGGQKAFELYPHIIKPMMNCTLPNLDPSLIQSAVFGIGLAAENGKDYFTPFLMESLQLINNVIVSVNSVQEQDDDLIAARDNAISAMGRIITNLPQHLGNNFPQTIALWLSYLPIQDD-GEAGSIIKSLCTLIRDFSQQIM--TQQYIVKVLEIIA 1019 The following BLAST results are available for this feature:
BLAST of FC925042 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC925042 ID=FC925042; Name=FC925042; organism=Citrus clementina; type=EST; length=791bpback to top |