FC925445
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC925445 vs. ExPASy Swiss-Prot
Match: SAR1A_ARATH (GTP-binding protein SAR1A OS=Arabidopsis thaliana GN=SAR1A PE=2 SV=1) HSP 1 Score: 263.462 bits (672), Expect = 7.897e-70 Identity = 132/170 (77.65%), Postives = 138/170 (81.18%), Query Frame = 2 Query: 2 LFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYIK 511 LFLGLDNAGKTTLLHMLKDERLVQHQPTQ+PTSEELSIGKIKFKAFDLGGHQIARRVW ERFAESKK +VPFL+LGNKIDIPYAASE+ELRYHLGLSNFTTGKGKVNL DSNVRPLEVFMCSIVRKMGYG+GFKW+SQYIK Sbjct: 24 LFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKKELDALLSDESLASVPFLILGNKIDIPYAASEDELRYHLGLSNFTTGKGKVNLTDSNVRPLEVFMCSIVRKMGYGEGFKWVSQYIK 193
BLAST of FC925445 vs. ExPASy Swiss-Prot
Match: SAR1A_BRACM (GTP-binding protein SAR1A OS=Brassica campestris GN=SAR1A PE=2 SV=1) HSP 1 Score: 259.61 bits (662), Expect = 1.140e-68 Identity = 131/170 (77.06%), Postives = 136/170 (80.00%), Query Frame = 2 Query: 2 LFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYIK 511 LFLGLDNAGKTTLLHMLKDERLVQHQPTQ+PTSEELSIGKIKFKAFDLGGHQIARRVW ERFAESKK VPFL+LGNKIDIPYAASE+ELRYHLGLSNFTTGKGKV+L SNVRPLEVFMCSIVRKMGYG+GFKWLSQYIK Sbjct: 24 LFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKKELDALLSDESLATVPFLILGNKIDIPYAASEDELRYHLGLSNFTTGKGKVDLVGSNVRPLEVFMCSIVRKMGYGEGFKWLSQYIK 193
BLAST of FC925445 vs. ExPASy Swiss-Prot
Match: SAR1B_ARATH (GTP-binding protein SAR1B OS=Arabidopsis thaliana GN=SAR1B PE=2 SV=1) HSP 1 Score: 255.373 bits (651), Expect = 2.150e-67 Identity = 128/169 (75.74%), Postives = 134/169 (79.29%), Query Frame = 2 Query: 2 LFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYI 508 LFLGLDNAGKTTLLHMLKDERLVQHQPTQ+PTSEELSIGKIKFKAFDLGGHQIARRVW ERFAESK+ VPFL+LGNKIDIPYAASE+ELRYHLGL+NFTTGKGKV L DS VRPLEVFMCSIVRKMGYG+GFKWLSQYI Sbjct: 24 LFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKRELDALLSDEALATVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVTLGDSGVRPLEVFMCSIVRKMGYGEGFKWLSQYI 192
BLAST of FC925445 vs. ExPASy Swiss-Prot
Match: SAR2_SOLLC (GTP-binding protein SAR2 OS=Solanum lycopersicum GN=SAR2 PE=2 SV=1) HSP 1 Score: 251.136 bits (640), Expect = 4.056e-66 Identity = 124/170 (72.94%), Postives = 133/170 (78.24%), Query Frame = 2 Query: 2 LFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYIK 511 LFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIG IKFKAFDLGGHQIARRVW ERF E+KK NVPFL+LGNKIDIPYAASE+ELRYHLGL+ TTGKG +NLA +NVRP+EVFMCSIVRKMGYG+GFKW+SQYIK Sbjct: 24 LFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGNIKFKAFDLGGHQIARRVWRDYYAKVDAVVYLVDANDRERFPEAKKELDGLLSDESLTNVPFLILGNKIDIPYAASEDELRYHLGLTGVTTGKGNINLAGTNVRPIEVFMCSIVRKMGYGEGFKWMSQYIK 193
BLAST of FC925445 vs. ExPASy Swiss-Prot
Match: SAR1B_BRACM (GTP-binding protein SAR1B OS=Brassica campestris GN=SAR1B PE=2 SV=1) HSP 1 Score: 247.284 bits (630), Expect = 5.856e-65 Identity = 127/171 (74.27%), Postives = 133/171 (77.78%), Query Frame = 2 Query: 2 LFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLA--DSNVRPLEVFMCSIVRKMGYGDGFKWLSQYI 508 LFLGLDNAGKTTLLHMLKDERLVQHQPTQ+PTSEELSIGKIKFKAFDLGGHQIARRVW ERF+ESKK VPFL+LGNKID PYAASE+ELRYHLGL+NFTTGKGKV A DS VRPLEVFMCSIVRKMGYG+GFKWLSQYI Sbjct: 24 LFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFSESKKELDALLSDDALATVPFLILGNKIDNPYAASEDELRYHLGLTNFTTGKGKVTTAGGDSGVRPLEVFMCSIVRKMGYGEGFKWLSQYI 194
BLAST of FC925445 vs. ExPASy Swiss-Prot
Match: SAR1_TOBAC (GTP-binding protein SAR1 OS=Nicotiana tabacum GN=SAR1 PE=2 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 1.072e-50 Identity = 109/175 (62.29%), Postives = 121/175 (69.14%), Query Frame = 2 Query: 2 LFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGN---KIDIPYAASEE-ELRYHLGLSNFT-TGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYIK 511 LFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVW ERFAESKK FL L N +I+ P + RYH+G + + +GKVNLADSNVRP+EVFMCSIVR+MGYG+GF+W+SQYIK Sbjct: 24 LFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDSFDKERFAESKKELDALLSGWSSLAHCFLFLDNWVTRIEHPICCLRKMNWRYHMGANGASPLARGKVNLADSNVRPVEVFMCSIVRQMGYGEGFRWMSQYIK 198
BLAST of FC925445 vs. ExPASy Swiss-Prot
Match: SAR1_USTMA (Small COPII coat GTPase SAR1 OS=Ustilago maydis GN=SAR1 PE=3 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 2.733e-46 Identity = 95/169 (56.21%), Postives = 116/169 (68.64%), Query Frame = 2 Query: 2 LFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYI 508 LFLGLDNAGKTTLLHMLK++RL QPT +PTSEEL+IG++KF +DLGGHQ ARR+W ERFAE++ +VPFL+LGNKID P A SEEELR +GL TTGKGKV L D +RP+E+FMCS+V + GYG+GF+W+SQYI Sbjct: 24 LFLGLDNAGKTTLLHMLKNDRLATLQPTLHPTSEELAIGQVKFTTYDLGGHQQARRLWKDYFPEVDGIVFLVDTQDHERFAEARAELDALLSIEELSSVPFLILGNKIDAPGAVSEEELRQAIGLYQ-TTGKGKVPLKD--IRPIEIFMCSVVMRQGYGEGFRWISQYI 189
BLAST of FC925445 vs. ExPASy Swiss-Prot
Match: SAR1B_RAT (GTP-binding protein SAR1b OS=Rattus norvegicus GN=Sar1b PE=2 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 1.356e-45 Identity = 93/169 (55.03%), Postives = 110/169 (65.09%), Query Frame = 2 Query: 2 LFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYI 508 +FLGLDNAGKTTLLHMLKD+RL QH PT +PTSEEL+I + F FDLGGH ARRVW ER ESK+ NVP L+LGNKID P A SEE LR GL TTGKG V+L + N RPLEVFMCS++++ GYG+GF+W++QYI Sbjct: 29 VFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHLQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKIDRPEAISEERLREMFGLYGQTTGKGSVSLKELNARPLEVFMCSVLKRQGYGEGFRWMAQYI 197
BLAST of FC925445 vs. ExPASy Swiss-Prot
Match: SAR1B_PIG (GTP-binding protein SAR1b OS=Sus scrofa GN=SAR1B PE=2 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 1.356e-45 Identity = 93/169 (55.03%), Postives = 110/169 (65.09%), Query Frame = 2 Query: 2 LFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYI 508 +FLGLDNAGKTTLLHMLKD+RL QH PT +PTSEEL+I + F FDLGGH ARRVW ER ESK+ NVP L+LGNKID P A SEE LR GL TTGKG V+L + N RPLEVFMCS++++ GYG+GF+W++QYI Sbjct: 29 VFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHVQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETVANVPILILGNKIDRPEAISEERLREMFGLYGQTTGKGSVSLKELNARPLEVFMCSVLKRQGYGEGFRWMAQYI 197
BLAST of FC925445 vs. ExPASy Swiss-Prot
Match: SAR1B_MOUSE (GTP-binding protein SAR1b OS=Mus musculus GN=Sar1b PE=1 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 1.356e-45 Identity = 93/169 (55.03%), Postives = 110/169 (65.09%), Query Frame = 2 Query: 2 LFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYI 508 +FLGLDNAGKTTLLHMLKD+RL QH PT +PTSEEL+I + F FDLGGH ARRVW ER ESK+ NVP L+LGNKID P A SEE LR GL TTGKG V+L + N RPLEVFMCS++++ GYG+GF+W++QYI Sbjct: 29 VFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHVQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKIDRPEAISEERLREMFGLYGQTTGKGSVSLKELNARPLEVFMCSVLKRQGYGEGFRWMAQYI 197 The following BLAST results are available for this feature:
BLAST of FC925445 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 50
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925445 ID=FC925445; Name=FC925445; organism=Citrus clementina; type=EST; length=694bpback to top |