FC928899
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC928899 vs. ExPASy Swiss-Prot
Match: MYG1_HUMAN (UPF0160 protein MYG1, mitochondrial OS=Homo sapiens GN=C12orf10 PE=1 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.558e-43 Identity = 103/266 (38.72%), Postives = 142/266 (53.38%), Query Frame = 3 Query: 147 RVGTHNGSFHCDEALGCFMIRLTDKFFNAQIVRSR------------------DPK------------------------------------HFGKELIAKELNVDEGHPDVHRLFLAVYKNFMEAIDAIDNGINQYDTDKPPRYVNNTNLSSRVGKLNLDWTEPDQSAERENEAFQQGMDLAGKEFLDTVRFYVRSWLPARSIVVECIAERYDYDPSGEIMVL-KRFCPWKLHLFELEEEMKIEPLIKYVLYEDDRGKQWRVQAV 779 R+GTHNG+FHCDEAL C ++RL ++ +A+IVR+R DP+ HFG +L+A+ L E V L+ +Y+NF+E +DA+DNGI+Q+ + PRY T LS+RV +LN W PDQ E F++ MDL +EFL + FY SWLPAR++V E +A+R+ DPSGEI+ L K CPWK HL+ LE + I +V+Y D G QWR+Q V Sbjct: 46 RIGTHNGTFHCDEALACALLRLLPEYRDAEIVRTRDPEKLASCDIVVDVGGEYDPRRHRYDHHQRSFTETMSSLSPGKPWQTKLSSAGLIYLHFGHKLLAQLLGPSEEDSMVGTLYDKMYENFVEEVDAVDNGISQW-AEGEPRYALTTTLSARVARLNPTWNHPDQDTEA---GFKRAMDLVQEEFLQRLDFYQHSWLPARALVEEALAQRFQVDPSGEIVELAKGACPWKEHLYHLESGLSPPVAIFFVIYTDQAG-QWRIQCV 306
BLAST of FC928899 vs. ExPASy Swiss-Prot
Match: MYG1_BOVIN (UPF0160 protein MYG1, mitochondrial OS=Bos taurus PE=2 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 2.034e-43 Identity = 103/266 (38.72%), Postives = 145/266 (54.51%), Query Frame = 3 Query: 147 RVGTHNGSFHCDEALGCFMIRLTDKFFNAQIVRSR------------------DPK------------------------------------HFGKELIAKELNVDEGHPDVHRLFLAVYKNFMEAIDAIDNGINQYDTDKPPRYVNNTNLSSRVGKLNLDWTEPDQSAERENEAFQQGMDLAGKEFLDTVRFYVRSWLPARSIVVECIAERYDYDPSGEIMVL-KRFCPWKLHLFELEEEMKIEPLIKYVLYEDDRGKQWRVQAV 779 R+GTHNG+FHCDEAL C ++RL ++ A+IVR+R DP+ HFG +L+A+ L E V L+ +Y+NF+E +DA+DNGI+Q++ +P RY+ T LS+RV +LN W +P+Q E F++ MDL +EFL + FY SWLPAR++V E +A+R+ DPSGEI+ L K CPWK HL++LE + I +V+Y D G QWRVQ V Sbjct: 46 RIGTHNGTFHCDEALACALLRLLPEYREAEIVRTRDPEKLAACDIVVDVGGEYDPQRHRYDHHQRSFTETMSSLSPGKPWQTKLSSAGLIYLHFGHKLLAQLLGTSEEDGMVGTLYDKMYENFVEEVDAVDNGISQWEEGEP-RYLLTTTLSARVARLNPTWNQPNQDTEA---GFKRAMDLVREEFLQRLDFYQNSWLPARTLVEEALAKRFQVDPSGEIIELEKGGCPWKEHLYQLELGLSPAGTIAFVIYTDQAG-QWRVQCV 306
BLAST of FC928899 vs. ExPASy Swiss-Prot
Match: U160_DICDI (UPF0160 protein OS=Dictyostelium discoideum GN=DDB_G0267768 PE=3 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 5.919e-43 Identity = 93/259 (35.91%), Postives = 143/259 (55.21%), Query Frame = 3 Query: 156 THNGSFHCDEALGCFMIRLTDKFFNAQIVRSRDP-------------------------------------------------KHFGKELIAKELNVDEGHPDVHRLFLAVYKNFMEAIDAIDNGINQYDTDKPPRYVNNTNLSSRVGKLNLDWTEPDQSAERENEAFQQGMDLAGKEFLDTVRFYVRSWLPARSIVVECIAERYDYDPSGEIMVLKRFCPWKLHLFELEEEMKIEPLIKYVLYEDDRGKQWRVQAVAV 785 TH+GSFH DEAL C++++L + +++I+RSRD KH+GK++I + L+ ++ ++ L+ +Y + ++ +D +DNG+ +Y +D PRY + +++S+RVG LN W EP Q E N+ F++ M+L G+ FLD + +Y +SWLP RSIV + R SGEI++L FCPWK HLF LE+E I+ IK+VL+ED G QWRV AV + Sbjct: 8 THSGSFHADEALACYLLKLLPTYKDSKIIRSRDKSVIEKSTVAVDVGAVYNFEKLRFDHHQSGFTETFDDKHDIKLSSAGLIYKHYGKDIIKQRLDTNDSITEL--LYQKLYDSMIQELDGVDNGVERYPSDIKPRYQSGSSISARVGHLNQGWNEP-QDDEIVNKQFEKAMELMGQYFLDRLDYYGKSWLPCRSIVENALENRKQTHSSGEILILDMFCPWKDHLFSLEQEKDIKTPIKFVLFEDTSG-QWRVSAVGI 262
BLAST of FC928899 vs. ExPASy Swiss-Prot
Match: YEY6_YEAST (UPF0160 protein YER156C OS=Saccharomyces cerevisiae GN=YER156C PE=1 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 4.390e-38 Identity = 94/267 (35.21%), Postives = 141/267 (52.81%), Query Frame = 3 Query: 144 KRVGTHNGSFHCDEALGCFMIRLTDKFFNAQIVRSRDPK------------------------------------------------HFGKELIAKELNVDEGHPDVHRLFLAVYKNFMEAIDAIDNGINQY----DTDKPPRYVNNT-NLSSRVGKLNLDWTEPDQSAERENEAFQQGMDLAGKEFLDTVRFYVRSWLPARSIVVECIAERYDYDPSGEIMVLKRFCPWKLHLFELEEEMKIEPLIKYVLYEDDRGKQWRVQAVAV 785 K++ TH+GSFH DE+L +M+RL +F +A++VRSR+PK H+G+++I LN D+ L+ VYK F+EA+DA DNGI++Y D++ P + +N ++ + +N +W E D S E + F + + G F+ VR Y +SWLPA+++V + I ER D D SG+I+VL +FCPWK HL+ELE E IE I++VL+ D G WRV V + Sbjct: 15 KQICTHSGSFHADESLAVYMLRLLPEFKDAKLVRSRNPKDWEASDILVDVGAQYDGVKFFDHHQRGFFETFNEKYKTKLSSAGLIFKHYGRDIIKTILNNKVSSSDLDLLYDKVYKQFVEALDANDNGISKYTIPKDSNLEPNFRDNAISIPGIISGMNPNWNE-DTSDESFDRCFARASEFIGGVFVTLVRGYGQSWLPAKALVAQAIDERMDVDKSGKIIVLPQFCPWKEHLYELEREKNIEKQIEFVLFTDSSG-AWRVSTVPI 279
BLAST of FC928899 vs. ExPASy Swiss-Prot
Match: MYG1_MOUSE (UPF0160 protein MYG1, mitochondrial OS=Mus musculus GN=Myg1 PE=2 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.412e-36 Identity = 79/174 (45.40%), Postives = 112/174 (64.37%), Query Frame = 3 Query: 261 HFGKELIAKELNVDEGHPDVHRLFLAVYKNFMEAIDAIDNGINQYDTDKPPRYVNNTNLSSRVGKLNLDWTEPDQSAERENEAFQQGMDLAGKEFLDTVRFYVRSWLPARSIVVECIAERYDYDPSGEIMVL-KRFCPWKLHLFELEEEMKIEPLIKYVLYEDDRGKQWRVQAV 779 HFG++L+A+ L E V ++ +Y+NF+E +DA+DNGI+Q+ + PRY T LS+RV +LN W +P+Q E F++ MDL +EFL + FY SWLPAR++V E +A+R+ D SGEI+ L K CPWK HL+ LE E+ + I +V+Y D G QWRVQ V Sbjct: 137 HFGRKLLAQLLGTSEEDSVVDTIYDKMYENFVEEVDAVDNGISQW-AEGEPRYAMTTTLSARVARLNPTWNQPNQDTEA---GFRRAMDLVQEEFLQRLNFYQHSWLPARALVEEALAQRFKVDSSGEIVELAKGGCPWKEHLYHLESELSPKVAITFVIYTDQAG-QWRVQCV 305
BLAST of FC928899 vs. ExPASy Swiss-Prot
Match: MYG1_RAT (UPF0160 protein MYG1, mitochondrial OS=Rattus norvegicus GN=Myg1 PE=1 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.844e-36 Identity = 80/174 (45.98%), Postives = 110/174 (63.22%), Query Frame = 3 Query: 261 HFGKELIAKELNVDEGHPDVHRLFLAVYKNFMEAIDAIDNGINQYDTDKPPRYVNNTNLSSRVGKLNLDWTEPDQSAERENEAFQQGMDLAGKEFLDTVRFYVRSWLPARSIVVECIAERYDYDPSGEIMVL-KRFCPWKLHLFELEEEMKIEPLIKYVLYEDDRGKQWRVQAV 779 HFG +L+A+ L E V ++ +Y+NF+E +DA+DNGI+Q+ + PRY T LS+RV +LN W +PDQ E F++ MDL +EFL + FY SWLPAR++V E +A+R+ D SGEI+ L K CPWK HL+ LE E+ I +V+Y D G QWRVQ V Sbjct: 138 HFGHKLLAQLLGTSEEDSVVDTIYDKMYENFVEEVDAVDNGISQW-AEGEPRYALTTTLSARVSRLNPTWNQPDQDTEA---GFRRAMDLVQEEFLQRLNFYQHSWLPARALVEEALAQRFKVDSSGEIVELAKGGCPWKEHLYHLESELSPTVAITFVIYTDQAG-QWRVQCV 306
BLAST of FC928899 vs. ExPASy Swiss-Prot
Match: YIW4_SCHPO (UPF0160 protein C694.04c OS=Schizosaccharomyces pombe GN=SPAC694.04c PE=2 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.726e-34 Identity = 90/266 (33.83%), Postives = 130/266 (48.87%), Query Frame = 3 Query: 141 LKRVGTHNGSFHCDEALGCFMIRLTDKFFNAQIVRSRDP------------------------------------------------KHFGKELI---AKELNVDEGHPDVHRLFLAVYKNFMEAIDAIDNGINQYDTDKPPRYVNNTNLSSRVGKLNLDWTEPDQSAERENEAFQQGMDLAGKEFLDTVRFYVRSWLPARSIVVECIAERYDYDPSGEIMVLKRFCPWKLHLFELEEEMKIEPLIKYVLYEDDRGKQWRVQAVAV 785 L ++ TH+G+FH DEAL +M+R D+F AQIVRSRDP KHFG+E+I +L ++E D+ L+ VY++F+E +DA DNGI+ Y P + +L V W Q + E FQ+ DL G F+ +V Y SWLPA+++ E I + D I+++ +F PWK HLF++E+E+ IE KY +Y D GK WRVQAV++ Sbjct: 4 LVKIATHSGTFHADEALAVYMLRRLDRFSGAQIVRSRDPQVLDSCDIIVDVGGKYDGIKYFDHHQREFNDTFSPKYSTRLSSAGLIYKHFGREVIHAVLPQLKINE--QDLETLYEKVYQSFVEGLDANDNGISAYPAGLKPSFKAAMSLPEMVSSFLPAWNSEKQDDQTYLECFQKASDLMGTWFVRSVEHYALSWLPAKTLAREAILKAKD----SPILIVDQFFPWKGHLFDIEKELGIENQFKYAIYSD--GKAWRVQAVSI 261
BLAST of FC928899 vs. ExPASy Swiss-Prot
Match: YK4P_CAEEL (UPF0160 protein C27H6.8 OS=Caenorhabditis elegans GN=C27H6.8 PE=2 SV=2) HSP 1 Score: 137.887 bits (346), Expect = 6.139e-32 Identity = 71/177 (40.11%), Postives = 107/177 (60.45%), Query Frame = 3 Query: 261 HFGKELIAKELNVDEGHPDVHRLFLAVYKNFMEAIDAIDNGINQYDTDKPPRYVNNTNLSSRVGKLNLDWTEPDQSAERENEAFQQGMDLAGKEFLDTVRFYVRSWLPARSIVVECIAERYDYDPSGEIMVLKR-FCPWKLHLFELEEEMKI-EPLIKYVLYEDDRGKQWRVQAVAV 785 H+G+E+I + L + + + +Y+ F+E+IDAIDNGI+QYD PRY ++ NLSSR G+ N W EP+ A+ E FQQ M G+EF +V++ W PAR I+ + +R++ D SG I++++ CPWK H F++E E I + I Y+L+ D WRVQA+ V Sbjct: 95 HYGREVINQILGGNVSSSMIDLFYHRLYEQFVESIDAIDNGISQYDG--VPRYHSSGNLSSRTGQFNSHWNEPENDAD---ERFQQAMQFIGEEFSRSVKYLANVWWPAREIIEAAVDKRFEIDASGRIILIENGGCPWKEHFFDIEVEKNIADDNITYILFSDSTNASWRVQAIPV 266 The following BLAST results are available for this feature:
BLAST of FC928899 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC928899 ID=FC928899; Name=FC928899; organism=Citrus clementina; type=EST; length=785bpback to top |