FC928947
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC928947 vs. ExPASy Swiss-Prot
Match: YCF68_ORYSJ (Uncharacterized protein ycf68 OS=Oryza sativa subsp. japonica GN=ycf68-1 PE=3 SV=1) HSP 1 Score: 58.151 bits (139), Expect = 1.352e-15 Identity = 29/42 (69.05%), Postives = 31/42 (73.81%), Query Frame = -2 Query: 227 KNGAPNNVFSQTKKYEIAPFISLWGDGGIVPFEPFSFFMLFP 352 +NGAPNN SQTK YEI +S WGDGGIVPFEP FF FP Sbjct: 79 ENGAPNNASSQTKNYEIT--LSFWGDGGIVPFEP--FFHAFP 116 HSP 2 Score: 43.8986 bits (102), Expect = 1.352e-15 Identity = 20/23 (86.96%), Postives = 20/23 (86.96%), Query Frame = -1 Query: 177 FFHAFPGGLEKGAINRIFLILPS 245 FFHAFPGGLEK AINR LILPS Sbjct: 111 FFHAFPGGLEKAAINRTSLILPS 133
BLAST of FC928947 vs. ExPASy Swiss-Prot
Match: YCF68_ORYSI (Uncharacterized protein ycf68 OS=Oryza sativa subsp. indica GN=ycf68-1 PE=3 SV=1) HSP 1 Score: 58.151 bits (139), Expect = 1.352e-15 Identity = 29/42 (69.05%), Postives = 31/42 (73.81%), Query Frame = -2 Query: 227 KNGAPNNVFSQTKKYEIAPFISLWGDGGIVPFEPFSFFMLFP 352 +NGAPNN SQTK YEI +S WGDGGIVPFEP FF FP Sbjct: 79 ENGAPNNASSQTKNYEIT--LSFWGDGGIVPFEP--FFHAFP 116 HSP 2 Score: 43.8986 bits (102), Expect = 1.352e-15 Identity = 20/23 (86.96%), Postives = 20/23 (86.96%), Query Frame = -1 Query: 177 FFHAFPGGLEKGAINRIFLILPS 245 FFHAFPGGLEK AINR LILPS Sbjct: 111 FFHAFPGGLEKAAINRTSLILPS 133
BLAST of FC928947 vs. ExPASy Swiss-Prot
Match: YCF68_ORYSA (Uncharacterized protein ycf68 OS=Oryza sativa GN=ycf68-1 PE=3 SV=1) HSP 1 Score: 58.151 bits (139), Expect = 1.352e-15 Identity = 29/42 (69.05%), Postives = 31/42 (73.81%), Query Frame = -2 Query: 227 KNGAPNNVFSQTKKYEIAPFISLWGDGGIVPFEPFSFFMLFP 352 +NGAPNN SQTK YEI +S WGDGGIVPFEP FF FP Sbjct: 79 ENGAPNNASSQTKNYEIT--LSFWGDGGIVPFEP--FFHAFP 116 HSP 2 Score: 43.8986 bits (102), Expect = 1.352e-15 Identity = 20/23 (86.96%), Postives = 20/23 (86.96%), Query Frame = -1 Query: 177 FFHAFPGGLEKGAINRIFLILPS 245 FFHAFPGGLEK AINR LILPS Sbjct: 111 FFHAFPGGLEKAAINRTSLILPS 133
BLAST of FC928947 vs. ExPASy Swiss-Prot
Match: YCF68_ORYNI (Uncharacterized protein ycf68 OS=Oryza nivara GN=ycf68-1 PE=3 SV=1) HSP 1 Score: 58.151 bits (139), Expect = 1.352e-15 Identity = 29/42 (69.05%), Postives = 31/42 (73.81%), Query Frame = -2 Query: 227 KNGAPNNVFSQTKKYEIAPFISLWGDGGIVPFEPFSFFMLFP 352 +NGAPNN SQTK YEI +S WGDGGIVPFEP FF FP Sbjct: 79 ENGAPNNASSQTKNYEIT--LSFWGDGGIVPFEP--FFHAFP 116 HSP 2 Score: 43.8986 bits (102), Expect = 1.352e-15 Identity = 20/23 (86.96%), Postives = 20/23 (86.96%), Query Frame = -1 Query: 177 FFHAFPGGLEKGAINRIFLILPS 245 FFHAFPGGLEK AINR LILPS Sbjct: 111 FFHAFPGGLEKAAINRTSLILPS 133
BLAST of FC928947 vs. ExPASy Swiss-Prot
Match: YCF68_SACOF (Uncharacterized protein ycf68 OS=Saccharum officinarum GN=ycf68-1 PE=3 SV=1) HSP 1 Score: 42.743 bits (99), Expect = 1.368e-15 Identity = 18/21 (85.71%), Postives = 19/21 (90.48%), Query Frame = -3 Query: 289 KMEHLTTYFHRPRNTRSPLSF 351 KMEHLTT+ HRPR TRSPLSF Sbjct: 80 KMEHLTTHLHRPRTTRSPLSF 100 HSP 2 Score: 42.3578 bits (98), Expect = 1.368e-15 Identity = 19/23 (82.61%), Postives = 19/23 (82.61%), Query Frame = -1 Query: 177 FFHAFPGGLEKGAINRIFLILPS 245 FFHAFPGGLEK INR LILPS Sbjct: 112 FFHAFPGGLEKAVINRTSLILPS 134 HSP 3 Score: 36.5798 bits (83), Expect = 1.368e-15 Identity = 16/22 (72.73%), Postives = 17/22 (77.27%), Query Frame = -2 Query: 227 ISLWGDGGIVPFEPFSFFMLFP 292 +S WGDGGIVPFEP FF FP Sbjct: 98 LSFWGDGGIVPFEP--FFHAFP 117
BLAST of FC928947 vs. ExPASy Swiss-Prot
Match: YCF68_SACHY (Uncharacterized protein ycf68 OS=Saccharum hybrid GN=ycf68-1 PE=3 SV=1) HSP 1 Score: 42.743 bits (99), Expect = 1.368e-15 Identity = 18/21 (85.71%), Postives = 19/21 (90.48%), Query Frame = -3 Query: 289 KMEHLTTYFHRPRNTRSPLSF 351 KMEHLTT+ HRPR TRSPLSF Sbjct: 80 KMEHLTTHLHRPRTTRSPLSF 100 HSP 2 Score: 42.3578 bits (98), Expect = 1.368e-15 Identity = 19/23 (82.61%), Postives = 19/23 (82.61%), Query Frame = -1 Query: 177 FFHAFPGGLEKGAINRIFLILPS 245 FFHAFPGGLEK INR LILPS Sbjct: 112 FFHAFPGGLEKAVINRTSLILPS 134 HSP 3 Score: 36.5798 bits (83), Expect = 1.368e-15 Identity = 16/22 (72.73%), Postives = 17/22 (77.27%), Query Frame = -2 Query: 227 ISLWGDGGIVPFEPFSFFMLFP 292 +S WGDGGIVPFEP FF FP Sbjct: 98 LSFWGDGGIVPFEP--FFHAFP 117
BLAST of FC928947 vs. ExPASy Swiss-Prot
Match: YCF68_MAIZE (Uncharacterized protein ycf68 OS=Zea mays GN=ycf68 PE=3 SV=2) HSP 1 Score: 42.743 bits (99), Expect = 1.368e-15 Identity = 18/21 (85.71%), Postives = 19/21 (90.48%), Query Frame = -3 Query: 289 KMEHLTTYFHRPRNTRSPLSF 351 KMEHLTT+ HRPR TRSPLSF Sbjct: 80 KMEHLTTHLHRPRTTRSPLSF 100 HSP 2 Score: 42.3578 bits (98), Expect = 1.368e-15 Identity = 19/23 (82.61%), Postives = 19/23 (82.61%), Query Frame = -1 Query: 177 FFHAFPGGLEKGAINRIFLILPS 245 FFHAFPGGLEK INR LILPS Sbjct: 112 FFHAFPGGLEKAVINRTSLILPS 134 HSP 3 Score: 36.5798 bits (83), Expect = 1.368e-15 Identity = 16/22 (72.73%), Postives = 17/22 (77.27%), Query Frame = -2 Query: 227 ISLWGDGGIVPFEPFSFFMLFP 292 +S WGDGGIVPFEP FF FP Sbjct: 98 LSFWGDGGIVPFEP--FFHAFP 117 The following BLAST results are available for this feature:
BLAST of FC928947 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC928947 ID=FC928947; Name=FC928947; organism=Citrus clementina; type=EST; length=380bpback to top |