FC929070
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929070 vs. ExPASy Swiss-Prot
Match: RK1_SPIOL (50S ribosomal protein L1, chloroplastic OS=Spinacia oleracea GN=RPL1 PE=1 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 5.059e-30 Identity = 65/71 (91.55%), Postives = 68/71 (95.77%), Query Frame = 2 Query: 515 DRTRSKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGK 727 DRTRSKRFLEIQ LRE K+EYDLKTA+SL+KQMSSTKF ETAEAHFRLNIDPKYNDQQLRATVSLPKGTGK Sbjct: 115 DRTRSKRFLEIQKLREIKQEYDLKTALSLMKQMSSTKFVETAEAHFRLNIDPKYNDQQLRATVSLPKGTGK 185
BLAST of FC929070 vs. ExPASy Swiss-Prot
Match: RK1_PEA (50S ribosomal protein L1, chloroplastic (Fragment) OS=Pisum sativum GN=RPL1 PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.055e-27 Identity = 61/71 (85.92%), Postives = 64/71 (90.14%), Query Frame = 2 Query: 515 DRTRSKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGK 727 DR RSKRFLEIQ LRE KKEYDLKTAISL+K+ + TKF ET EAHFRLNIDPKYNDQQLRATVSLPKGTGK Sbjct: 53 DRVRSKRFLEIQKLRELKKEYDLKTAISLVKETAKTKFVETVEAHFRLNIDPKYNDQQLRATVSLPKGTGK 123
BLAST of FC929070 vs. ExPASy Swiss-Prot
Match: RK1_ARATH (50S ribosomal protein L1, chloroplastic OS=Arabidopsis thaliana GN=RPL1 PE=1 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.055e-27 Identity = 60/72 (83.33%), Postives = 66/72 (91.67%), Query Frame = 2 Query: 512 RDRTRSKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGK 727 RDRTRSKRFLEIQ LRE KKEYD+ TAISLLKQ ++T+F E+ EAHFRLNIDPKYNDQQLRATVSLPKGTG+ Sbjct: 108 RDRTRSKRFLEIQKLRETKKEYDVNTAISLLKQTANTRFVESVEAHFRLNIDPKYNDQQLRATVSLPKGTGQ 179
BLAST of FC929070 vs. ExPASy Swiss-Prot
Match: RK1_CYAME (50S ribosomal protein L1, chloroplastic OS=Cyanidioschyzon merolae GN=rpl1 PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.980e-14 Identity = 40/68 (58.82%), Postives = 51/68 (75.00%), Query Frame = 2 Query: 524 RSKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGK 727 RSKR+ + +L E K Y + A+ LLK++++ KF ETAEAH RLN+DPKY DQQ+RATV LP GTGK Sbjct: 3 RSKRYQSLCSLIEPKL-YSPQEALKLLKKLATAKFVETAEAHIRLNLDPKYTDQQIRATVVLPHGTGK 69
BLAST of FC929070 vs. ExPASy Swiss-Prot
Match: RL1_MICAN (50S ribosomal protein L1 OS=Microcystis aeruginosa (strain NIES-843) GN=rplA PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.931e-13 Identity = 39/67 (58.21%), Postives = 49/67 (73.13%), Query Frame = 2 Query: 527 SKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGK 727 S+R + Q E K Y+ A++LLK++++ KF ETAEAH RL IDPKY DQQLR TVSLPKGTG+ Sbjct: 6 SRRLRDAQAKVENKA-YEPLEALTLLKELATAKFDETAEAHIRLGIDPKYTDQQLRTTVSLPKGTGR 71
BLAST of FC929070 vs. ExPASy Swiss-Prot
Match: RK1_CYAPA (50S ribosomal protein L1, cyanelle OS=Cyanophora paradoxa GN=rpl1 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.523e-13 Identity = 40/70 (57.14%), Postives = 50/70 (71.43%), Query Frame = 2 Query: 518 RTRSKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGK 727 + RS+R E+ E ++ Y+ AI LLKQ+S+ KF ET E H RL IDPKYNDQQLRATV+LP GTG+ Sbjct: 2 KKRSRRMQELVGKVE-EQLYEPLEAIQLLKQISTAKFIETVEVHCRLGIDPKYNDQQLRATVTLPNGTGQ 70
BLAST of FC929070 vs. ExPASy Swiss-Prot
Match: RL1_THEM4 (50S ribosomal protein L1 OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=rplA PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.303e-13 Identity = 34/67 (50.75%), Postives = 49/67 (73.13%), Query Frame = 2 Query: 527 SKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGK 727 SKR+ E++ L + KEYDL A+ L K++++ KF ET E H + NID + +DQQ+R+T+SLP GTGK Sbjct: 5 SKRYNEVRKLVDRTKEYDLNEAVDLAKKVATAKFDETVELHIKTNIDYRKSDQQIRSTISLPHGTGK 71
BLAST of FC929070 vs. ExPASy Swiss-Prot
Match: RL1_ANAVT (50S ribosomal protein L1 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=rplA PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.303e-13 Identity = 39/67 (58.21%), Postives = 48/67 (71.64%), Query Frame = 2 Query: 527 SKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGK 727 S+R E+Q E + EY A+SLLK+ ++ KF E AEAH RL IDPKY DQQLR TV+LPKGTG+ Sbjct: 6 SRRLRELQAKVEDR-EYGPLDALSLLKETATAKFAEAAEAHIRLGIDPKYTDQQLRTTVALPKGTGQ 71
BLAST of FC929070 vs. ExPASy Swiss-Prot
Match: RL1_CYAP8 (50S ribosomal protein L1 OS=Cyanothece sp. (strain PCC 8801) GN=rplA PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.620e-13 Identity = 38/67 (56.72%), Postives = 46/67 (68.66%), Query Frame = 2 Query: 527 SKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGK 727 SKRF E + + Y A+ LLK+ ++ KF E+AEAH RL IDPKY DQQLR TVSLPKGTG+ Sbjct: 6 SKRFKEALAKVDQNQTYAPLEALQLLKETATAKFNESAEAHIRLGIDPKYTDQQLRTTVSLPKGTGQ 72
BLAST of FC929070 vs. ExPASy Swiss-Prot
Match: RL1_TRIEI (50S ribosomal protein L1 OS=Trichodesmium erythraeum (strain IMS101) GN=rplA PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.339e-13 Identity = 37/67 (55.22%), Postives = 49/67 (73.13%), Query Frame = 2 Query: 527 SKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGK 727 S+R E++ E ++ Y+ K A+ LLK+ ++ KF E AEAH RL IDPKY DQQLR TV+LPKGTG+ Sbjct: 6 SRRLQELRKKVE-ERPYEPKEALQLLKETATAKFLEAAEAHVRLGIDPKYTDQQLRTTVALPKGTGQ 71 The following BLAST results are available for this feature:
BLAST of FC929070 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929070 ID=FC929070; Name=FC929070; organism=Citrus clementina; type=EST; length=728bpback to top |