FC929711

Overview
NameFC929711
Unique NameFC929711
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length850
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9257 contig Ccv1_Contig9257:11..860. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929711 vs. ExPASy Swiss-Prot
Match: NAT15_XENTR (N-acetyltransferase 15 OS=Xenopus tropicalis GN=nat15 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 9.744e-18
Identity = 56/179 (31.28%), Postives = 94/179 (52.51%), Query Frame = 3
Query:  228 DLMILQQLHADAFPIRYESEFFQNVVNARDIVSWGAVDRSRPNGHSDELIGFVTARIVQANE--SEIGDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPT--CRALYLHVISYNIPAIHLYKKMSFKCVRRLHGFYLINGQHYDSYLFVYYINGGRSPCSPLE 752
            D+  +++L AD FPI Y   +++++ + +   S  A        ++ +++G + A I    +   E GD+L+  S   D  + YIL+LGVV  +R  GI S L+  +  + S+     C+ALYLHV++ N  AI  Y+   F     L  +Y I G   D+Y +V Y+NGG  P + ++
Sbjct:   22 DIDTVKELCADWFPIEYPDSWYRDITSNKKFFSLAAT-------YNGQIVGMIVAEIKGRTKVHKEDGDILA-SSFSGDTQVAYILSLGVVKEFRKQGIGSLLLESLKSHISSTAQDHCKALYLHVLTTNSNAIRFYENRHFHQHHYLPYYYSIRGVLQDAYTYVLYLNGGHPPWTVMD 192          
BLAST of FC929711 vs. ExPASy Swiss-Prot
Match: NAT15_BOVIN (N-acetyltransferase 15 OS=Bos taurus GN=NAT15 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.836e-17
Identity = 57/181 (31.49%), Postives = 91/181 (50.28%), Query Frame = 3
Query:  228 DLMILQQLHADAFPIRYESEFFQNVVNARDIVSWGAVDRSRPNGHSDELIGFVTARIVQANE--SEIGDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPT--CRALYLHVISYNIPAIHLYKKMSFKCVRRLHGFYLINGQHYDSYLFVYYINGGRSPCSPLELV 758
            D+  ++ L  D FPI Y   +++++ + +   S  A  R        +++G + A I    +   E GD+L+  S   D  + YIL+LGVV  +R  GI S L+  +  + S      C+A+YLHV++ N  AI  Y+   FK    L  +Y I G   D + +V YINGG  P + L+ +
Sbjct:   22 DIDTVKHLCGDWFPIEYPDSWYRDITSNKKFFSLAATYRG-------DIVGMIVAEIKNRTKIHKEDGDILA-SSFSVDTQVAYILSLGVVKEFRKHGIGSLLLESLKDHISTTAQDHCKAIYLHVLTTNNTAISFYENRDFKQHHYLPYYYSIRGVLKDGFTYVLYINGGHPPWTILDYI 194          
BLAST of FC929711 vs. ExPASy Swiss-Prot
Match: NAT15_RAT (N-acetyltransferase 15 OS=Rattus norvegicus GN=Nat15 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.407e-16
Identity = 56/181 (30.94%), Postives = 91/181 (50.28%), Query Frame = 3
Query:  228 DLMILQQLHADAFPIRYESEFFQNVVNARDIVSWGAVDRSRPNGHSDELIGFVTARIVQANE--SEIGDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPT--CRALYLHVISYNIPAIHLYKKMSFKCVRRLHGFYLINGQHYDSYLFVYYINGGRSPCSPLELV 758
            D+  ++ L  D FPI Y   +++++ + +   S  A  R         ++G + A I    +   E GD+L+  S   D  + YIL+LGVV  +R  GI S L+  +  + S      C+A+YLHV++ N  AI+ Y+   F+    L  +Y I G   D + +V YINGG  P + L+ +
Sbjct:   22 DIDTVKHLCGDWFPIEYPDSWYRDITSNKKFFSLAATYRGA-------IVGMIVAEIKNRTKIHKEDGDILA-SSFSVDTQVAYILSLGVVKEFRKHGIGSLLLESLKDHISTTAQDHCKAIYLHVLTTNNTAINFYENRDFRQHHYLPYYYSIRGVLKDGFTYVLYINGGHPPWTILDYI 194          
BLAST of FC929711 vs. ExPASy Swiss-Prot
Match: NAT15_MOUSE (N-acetyltransferase 15 OS=Mus musculus GN=Nat15 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.407e-16
Identity = 56/181 (30.94%), Postives = 91/181 (50.28%), Query Frame = 3
Query:  228 DLMILQQLHADAFPIRYESEFFQNVVNARDIVSWGAVDRSRPNGHSDELIGFVTARIVQANE--SEIGDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPT--CRALYLHVISYNIPAIHLYKKMSFKCVRRLHGFYLINGQHYDSYLFVYYINGGRSPCSPLELV 758
            D+  ++ L  D FPI Y   +++++ + +   S  A  R         ++G + A I    +   E GD+L+  S   D  + YIL+LGVV  +R  GI S L+  +  + S      C+A+YLHV++ N  AI+ Y+   F+    L  +Y I G   D + +V YINGG  P + L+ +
Sbjct:   22 DIDTVKHLCGDWFPIEYPDSWYRDITSNKKFFSLAATYRGA-------IVGMIVAEIKNRTKIHKEDGDILA-SSFSVDTQVAYILSLGVVKEFRKHGIGSLLLESLKDHISTTAQDHCKAIYLHVLTTNNTAINFYENRDFRQHHYLPYYYSIRGVLKDGFTYVLYINGGHPPWTILDYI 194          
BLAST of FC929711 vs. ExPASy Swiss-Prot
Match: NAT15_HUMAN (N-acetyltransferase 15 OS=Homo sapiens GN=NAT15 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.407e-16
Identity = 56/181 (30.94%), Postives = 91/181 (50.28%), Query Frame = 3
Query:  228 DLMILQQLHADAFPIRYESEFFQNVVNARDIVSWGAVDRSRPNGHSDELIGFVTARIVQANE--SEIGDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPT--CRALYLHVISYNIPAIHLYKKMSFKCVRRLHGFYLINGQHYDSYLFVYYINGGRSPCSPLELV 758
            D+  ++ L  D FPI Y   +++++ + +   S  A  R         ++G + A I    +   E GD+L+  +   D  + YIL+LGVV  +R  GI S L+  +  + S      C+A+YLHV++ N  AI+ Y+   FK    L  +Y I G   D + +V YINGG  P + L+ +
Sbjct:   22 DIDTVKHLCGDWFPIEYPDSWYRDITSNKKFFSLAATYRGA-------IVGMIVAEIKNRTKIHKEDGDILA-SNFSVDTQVAYILSLGVVKEFRKHGIGSLLLESLKDHISTTAQDHCKAIYLHVLTTNNTAINFYENRDFKQHHYLPYYYSIRGVLKDGFTYVLYINGGHPPWTILDYI 194          
BLAST of FC929711 vs. ExPASy Swiss-Prot
Match: NAT15_DANRE (N-acetyltransferase 15 OS=Danio rerio GN=nat15 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.400e-16
Identity = 56/174 (32.18%), Postives = 87/174 (50.00%), Query Frame = 3
Query:  228 DLMILQQLHADAFPIRYESEFFQNVVNARDIVSWGAVDRSRPNGHSDELIGFVTARIVQANE--SEIGDLLSYDSAKSDQTLVYILTLGVVDTYRNLGIASSLISEVIKYASNIPT--CRALYLHVISYNIPAIHLYKKMSFKCVRRLHGFYLINGQHYDSYLFVYYINGGRSP 737
            D+  ++ L  + FPI Y   ++ ++ + +   S  A  R         ++G + A I    +   E GD+L+  S   D  + YIL+LGVV  +R  GI S L+  + ++ S      C+A+YLHV++ N  AIH Y+   FK    L  +Y I G   D + +V YINGG  P
Sbjct:   22 DIDRIKVLCGEWFPIEYPDSWYHDITSNKKFFSLAATFRGG-------IVGMIVAEIKSRTKVHKEDGDILA-SSFPVDTQVAYILSLGVVKEFRKHGIGSLLLDSLKEHISTTAQDHCKAIYLHVLTTNNTAIHFYENRDFKQHHYLPYYYSIRGVLKDGFTYVLYINGGHPP 187          
The following BLAST results are available for this feature:
BLAST of FC929711 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
NAT15_XENTR9.744e-1831.28N-acetyltransferase 15 OS=Xenopus tropicalis GN=na... [more]
NAT15_BOVIN4.836e-1731.49N-acetyltransferase 15 OS=Bos taurus GN=NAT15 PE=2... [more]
NAT15_RAT1.407e-1630.94N-acetyltransferase 15 OS=Rattus norvegicus GN=Nat... [more]
NAT15_MOUSE1.407e-1630.94N-acetyltransferase 15 OS=Mus musculus GN=Nat15 PE... [more]
NAT15_HUMAN1.407e-1630.94N-acetyltransferase 15 OS=Homo sapiens GN=NAT15 PE... [more]
NAT15_DANRE2.400e-1632.18N-acetyltransferase 15 OS=Danio rerio GN=nat15 PE=... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAH1BC12RM2 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH1BC12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929711 ID=FC929711; Name=FC929711; organism=Citrus clementina; type=EST; length=850bp
GGCACGAGGAAATCTATCCGCTCTCTTTGTCCTTACAGCTACTGAATTTT
TATAGTGACTAGTTTCATTGTGGCCATGGTTGATGTGGCATAAATGGAAG
GAGAAGTTCATGAACAATTTCTCCAAATATCTCTTATCTTTGTTGGGGAT
TAAGAGCTAAATTCTCAATGGTAAATCCAAAAGTTTCCCGCCATCCCACA
ATATGCTACAGGCCCATACGACCCTCAGATTTGATGATTTTACAGCAACT
CCATGCTGATGCTTTTCCTATCAGGTATGAGTCTGAATTTTTCCAGAATG
TTGTGAATGCACGTGATATTGTGTCCTGGGGAGCTGTTGACCGGAGTCGA
CCTAATGGTCACAGCGATGAACTTATTGGATTTGTTACTGCCCGAATTGT
GCAGGCAAATGAAAGTGAGATAGGAGATTTGCTCAGTTATGATTCAGCGA
AATCAGATCAAACACTAGTCTACATTTTGACATTGGGAGTAGTGGACACT
TATAGAAATCTTGGAATAGCTTCTTCGCTTATTAGCGAGGTCATCAAATA
TGCCTCAAATATCCCAACATGCCGTGCATTGTACTTACATGTGATCTCTT
ACAACATTCCAGCCATCCATTTGTACAAGAAAATGTCATTCAAGTGCGTA
CGAAGGTTGCATGGTTTTTATTTAATCAATGGGCAACATTACGATTCATA
CTTGTTCGTTTACTACATAAATGGTGGCCGTTCTCCCTGCTCGCCGTTGG
AGCTTGTAACAGTTGCAGTGAGTTACATGAGGAGGGGTCTTAACTCAGTG
GCTGCAAGGCTGAAGAAGAACGAAGAAAATGGCCGAAATGGGCAAATGTA
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