FC929873

Overview
NameFC929873
Unique NameFC929873
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length723
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15224 contig Ccv1_Contig15224:435..1157. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: KPRO_MAIZE (Putative receptor protein kinase ZmPK1 OS=Zea mays GN=PK1 PE=2 SV=2)

HSP 1 Score: 183.726 bits (465), Expect = 8.455e-46
Identity = 101/194 (52.06%), Postives = 134/194 (69.07%), Query Frame = 2
Query:  134 TNLRLFSYNELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKP---DWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLL---SDQSRTHTMIRGTRGYVAPEWV 697
            +N R +SY EL +AT  FK ELGRG  G VYKGVL+    + +AVKKL+ + Q +E  F++E+S IGR +H NLV++ GFC E  +RLLV E++ NG+LAN++F+       DW  R  I+L +A+GL YLH EC   +IHCD+KP+NILLD  F  KI+DFGL KLL    S Q+ +H  +RGT GY+APEWV
Sbjct:  519 SNFRRYSYRELVKATRKFKVELGRGESGTVYKGVLED--DRHVAVKKLENVRQGKE-VFQAELSVIGRINHMNLVRIWGFCSEGSHRLLVSEYVENGSLANILFSEGGNILLDWEGRFNIALGVAKGLAYLHHECLEWVIHCDVKPENILLDQAFEPKITDFGLVKLLNRGGSTQNVSH--VRGTLGYIAPEWV 707          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: Y2239_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana GN=At2g23950 PE=2 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.263e-41
Identity = 91/198 (45.96%), Postives = 125/198 (63.13%), Query Frame = 2
Query:  137 NLRLFSYNELKEATGGF--KEELGRGSFGIVYKGVLKSASGKAIAVKKL-DRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWVQMHLSQPK 721
            NLR F++ EL  AT GF  K  LG G FG VY+G  K   G  +AVK+L D        +F++E+  I    H+NL++L+G+C  +  RLLVY +M NG++A+ + A P  DWN R +I++  ARGL YLHE+C+  IIH D+K  NILLD YF A + DFGL+KLL  + S   T +RGT G++APE++    S  K
Sbjct:  283 NLRSFTFRELHVATDGFSSKSILGAGGFGNVYRG--KFGDGTVVAVKRLKDVNGTSGNSQFRTELEMISLAVHRNLLRLIGYCASSSERLLVYPYMSNGSVASRLKAKPALDWNTRKKIAIGAARGLFYLHEQCDPKIIHRDVKAANILLDEYFEAVVGDFGLAKLLNHEDSHVTTAVRGTVGHIAPEYLSTGQSSEK 478          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: Y5457_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.397e-40
Identity = 96/221 (43.44%), Postives = 131/221 (59.28%), Query Frame = 2
Query:   83 WRRRKYENN--VQDSSTSETNLRLFSYNELKEATGGF--KEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIF----AIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWVQMHLSQPK 721
            W R +   +   QD      +L+ FS+ E++ AT  F  K  LG+G FG+VYKG L +  G  +AVK+L       E +F++EV  IG   H+NL++L GFC     R+LVY +M NG++A+ +       P  DWN R+ I+L  ARGLVYLHE+CN  IIH D+K  NILLD  F A + DFGL+KLL    S   T +RGT G++APE++    S  K
Sbjct:  264 WHRSRLSRSHVQQDYEFEIGHLKRFSFREIQTATSNFSPKNILGQGGFGMVYKGYLPN--GTVVAVKRLKDPIYTGEVQFQTEVEMIGLAVHRNLLRLFGFCMTPEERMLVYPYMPNGSVADRLRDNYGEKPSLDWNRRISIALGAARGLVYLHEQCNPKIIHRDVKAANILLDESFEAIVGDFGLAKLLDQRDSHVTTAVRGTIGHIAPEYLSTGQSSEK 482          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: Y1154_ARATH (Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana GN=At1g01540 PE=1 SV=2)

HSP 1 Score: 165.236 bits (417), Expect = 3.112e-40
Identity = 90/190 (47.37%), Postives = 120/190 (63.16%), Query Frame = 2
Query:  143 RLFSYNELKEATGGFKEE--LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFA----IPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEW 694
            R ++  EL+ AT G  EE  +G G +GIVY+G+L    G  +AVK L     + E+EFK EV  IGR  HKNLV+LLG+C E   R+LVY+F+ NG L   I      +    W++R+ I L +A+GL YLHE     ++H DIK  NILLD  ++AK+SDFGL+KLL S+ S   T + GT GYVAPE+
Sbjct:  140 RWYTLRELEAATNGLCEENVIGEGGYGIVYRGIL--TDGTKVAVKNLLNNRGQAEKEFKVEVEVIGRVRHKNLVRLLGYCVEGAYRMLVYDFVDNGNLEQWIHGDVGDVSPLTWDIRMNIILGMAKGLAYLHEGLEPKVVHRDIKSSNILLDRQWNAKVSDFGLAKLLGSESSYVTTRVMGTFGYVAPEY 327          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: Y5005_ARATH (Probable receptor-like protein kinase At5g20050 OS=Arabidopsis thaliana GN=At5g20050 PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 6.933e-40
Identity = 89/202 (44.06%), Postives = 126/202 (62.38%), Query Frame = 2
Query:  149 FSYNELKEATGGFKEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALN---RLLVYEFMGNGTLANLIFAIPKPD-------------WNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWVQMH 706
            F   +L+EAT GF+  +G+G  G V+KGVLK   G  +AVK+++   ++ EREF+SEV+AI    HKNLV+L G+         R LVY+++ N +L   IF    PD             W  R ++++++A+ L YLH +C   I+H D+KP+NILLD  F A ++DFGLSKL+  D+SR  T IRGTRGY+APEW+  H
Sbjct:   93 FKLEDLEEATDGFRSLIGKGGSGSVFKGVLKD--GSQVAVKRIEG-EEKGEREFRSEVAAIASVQHKNLVRLYGYSSSTSANRPRFLVYDYIVNSSLDIWIF----PDRGNRGRSGGGCLSWEQRYQVAIDVAKALAYLHHDCRSKILHLDVKPENILLDENFRAVVTDFGLSKLIARDESRVLTDIRGTRGYLAPEWLLEH 287          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: Y1743_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g74360 OS=Arabidopsis thaliana GN=At1g74360 PE=1 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 6.933e-40
Identity = 86/191 (45.03%), Postives = 125/191 (65.45%), Query Frame = 2
Query:  149 FSYNELKEATGGFKEE--LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEV-----SAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPDWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHTMIRGTRGYVAPEWVQ 700
            F+Y ++ +AT  F EE  +GRG +G VY+GVL    G+ +AVKKL R   E E+EF++E+     +A G   H NLV+L G+C +   ++LV+E+MG G+L  LI    K  W  R+ I+ ++ARGLV+LH EC   I+H D+K  N+LLD + +A+++DFGL++LL    S   T+I GT GYVAPE+ Q
Sbjct:  802 FTYADILKATSNFSEERVVGRGGYGTVYRGVLPD--GREVAVKKLQREGTEAEKEFRAEMEVLSANAFGDWAHPNLVRLYGWCLDGSEKILVHEYMGGGSLEELITDKTKLQWKKRIDIATDVARGLVFLHHECYPSIVHRDVKASNVLLDKHGNARVTDFGLARLLNVGDSHVSTVIAGTIGYVAPEYGQ 990          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: Y1684_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana GN=At1g06840 PE=1 SV=2)

HSP 1 Score: 163.696 bits (413), Expect = 9.055e-40
Identity = 94/223 (42.15%), Postives = 139/223 (62.33%), Query Frame = 2
Query:   86 RRRKYENNVQDSSTSETNLRL-----FSYNELKEATGGFKE--ELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLA-NLIFAIPKP-DWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLL-------LSDQSRTHTMIRGTRGYVAPEWVQMH 706
            R R Y    +   +S+ +L++     F+Y EL  AT  F    ++G+G +G VYKG L   SG  +A+K+    + + E+EF +E+  + R HH+NLV LLGFCDE   ++LVYE+M NGTL  N+   + +P D+ +R+RI+L  A+G++YLH E N PI H DIK  NILLD+ F+AK++DFGLS+L        +S Q    T+++GT GY+ PE+   H
Sbjct:  587 RMRGYSAVARRKRSSKASLKIEGVKSFTYAELALATDNFNSSTQIGQGGYGKVYKGTL--GSGTVVAIKRAQEGSLQGEKEFLTEIELLSRLHHRNLVSLLGFCDEEGEQMLVYEYMENGTLRDNISVKLKEPLDFAMRLRIALGSAKGILYLHTEANPPIFHRDIKASNILLDSRFTAKVADFGLSRLAPVPDMEGISPQ-HVSTVVKGTPGYLDPEYFLTH 806          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: CRK29_ARATH (Cysteine-rich receptor-like protein kinase 29 OS=Arabidopsis thaliana GN=CRK29 PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.183e-39
Identity = 102/229 (44.54%), Postives = 134/229 (58.52%), Query Frame = 2
Query:   80 KWRRRK--YENNVQDSST----------SETNLRLFSYNELKEATGGF--KEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKP---DWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTH---TMIRGTRGYVAPEWVQMH 706
            KWR+ K  Y+N V   S           S T   L  +  LK AT  F  + ELGRG FG VYKGV     G+ IAVK+L   + + + EFK+E+  + +  H+NLV+L+GFC +   RLLVYEF+ N +L   IF   K    DW +R ++   IARGL+YLHE+    IIH D+K  NILLD   + KI+DFGL+KL  S Q+ TH   + I GT GY+APE+  MH
Sbjct:  310 KWRKNKSGYKNKVLGKSPLSGSIAEDEFSNTESLLVHFETLKTATDNFSSENELGRGGFGSVYKGVFPQ--GQEIAVKRLSGNSGQGDNEFKNEILLLAKLQHRNLVRLIGFCIQGEERLLVYEFIKNASLDQFIFDTEKRQLLDWVVRYKMIGGIARGLLYLHEDSRFRIIHRDLKASNILLDQEMNPKIADFGLAKLFDSGQTMTHRFTSRIAGTYGYMAPEYA-MH 535          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: CRK28_ARATH (Cysteine-rich receptor-like protein kinase 28 OS=Arabidopsis thaliana GN=CRK28 PE=2 SV=2)

HSP 1 Score: 163.31 bits (412), Expect = 1.183e-39
Identity = 90/188 (47.87%), Postives = 123/188 (65.43%), Query Frame = 2
Query:  155 YNELKEATGGF--KEELGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKP---DWNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTH---TMIRGTRGYVAPEW 694
            +  LK AT  F  + ELGRG FG VYKGV   + G+ IAVK+L   + + + EFK+E+  + +  H+NLV+LLGFC E   R+LVYEF+ N +L N IF + K    DW +R ++   +ARGL+YLHE+    IIH D+K  NILLD   + KI+DFGL+KL  +DQ+ TH   + I GT GY+APE+
Sbjct:  351 FETLKAATDNFSPENELGRGGFGSVYKGVF--SGGQEIAVKRLSCTSGQGDSEFKNEILLLAKLQHRNLVRLLGFCIEGQERILVYEFIKNASLDNFIFDLKKRQLLDWGVRYKMIGGVARGLLYLHEDSRYRIIHRDLKASNILLDQEMNPKIADFGLAKLYDTDQTSTHRFTSKIAGTYGYMAPEY 536          
BLAST of FC929873 vs. ExPASy Swiss-Prot
Match: CRK40_ARATH (Cysteine-rich receptor-like protein kinase 40 OS=Arabidopsis thaliana GN=CRK40 PE=1 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.708e-38
Identity = 94/214 (43.93%), Postives = 133/214 (62.15%), Query Frame = 2
Query:   83 WRRRKYENNVQDSSTSETN---LRLFSYNELKEATGGFKEE--LGRGSFGIVYKGVLKSASGKAIAVKKLDRLAQEREREFKSEVSAIGRTHHKNLVQLLGFCDEALNRLLVYEFMGNGTLANLIFAIPKPD---WNLRVRISLEIARGLVYLHEECNVPIIHCDIKPQNILLDNYFSAKISDFGLSKLLLSDQSRTHT-MIRGTRGYVAPEWV 697
            + RR   NNV  +  S+++   +  F    +  AT  F  E  LG+G FG VYKG   +  G+ +AVK+L + + + + EFK+EVS + R  HKNLV+LLGFC+E    +LVYEF+ N +L + IF   K     W +R RI   IARGL+YLHE+  + IIH D+K  NILLD   + K++DFG ++L  SD++R  T  I GTRGY+APE++
Sbjct:  311 YARRGKLNNVGSAEYSDSDGQFMLRFDLGMIVMATDDFSSENTLGQGGFGTVYKGTFPN--GQEVAVKRLTKGSGQGDMEFKNEVSLLTRLQHKNLVKLLGFCNEGDEEILVYEFVPNSSLDHFIFDEDKRSLLTWEVRFRIIEGIARGLLYLHEDSQLKIIHRDLKASNILLDAEMNPKVADFGTARLFDSDETRAETKRIAGTRGYMAPEYL 522          
The following BLAST results are available for this feature:
BLAST of FC929873 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KPRO_MAIZE8.455e-4652.06Putative receptor protein kinase ZmPK1 OS=Zea mays... [more]
Y2239_ARATH1.263e-4145.96Probable LRR receptor-like serine/threonine-protei... [more]
Y5457_ARATH1.397e-4043.44Probable LRR receptor-like serine/threonine-protei... [more]
Y1154_ARATH3.112e-4047.37Probable serine/threonine-protein kinase At1g01540... [more]
Y5005_ARATH6.933e-4044.06Probable receptor-like protein kinase At5g20050 OS... [more]
Y1743_ARATH6.933e-4045.03Probable LRR receptor-like serine/threonine-protei... [more]
Y1684_ARATH9.055e-4042.15Probable LRR receptor-like serine/threonine-protei... [more]
CRK29_ARATH1.183e-3944.54Cysteine-rich receptor-like protein kinase 29 OS=A... [more]
CRK28_ARATH1.183e-3947.87Cysteine-rich receptor-like protein kinase 28 OS=A... [more]
CRK40_ARATH1.708e-3843.93Cysteine-rich receptor-like protein kinase 40 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionC34001D03EF PostHarvC1 Citrus clementina cDNA clone C34001D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929873 ID=FC929873; Name=FC929873; organism=Citrus clementina; type=EST; length=723bp
ATTCTTATTAGGTCCTTTCCTGCGAGGAAGTTCTATATTCTGCAATGCCT
TTCTGCTGCTAGCAATACTTATCCTTTTAAAGTGGCGCAGGAGAAAGTAT
GAAAATAATGTCCAAGATTCAAGCACTTCCGAAACAAATCTGCGATTATT
TTCCTATAACGAACTTAAAGAAGCGACAGGCGGGTTCAAAGAAGAACTGG
GCCGGGGTTCTTTTGGCATAGTTTACAAAGGAGTCCTCAAATCTGCTTCA
GGAAAGGCTATAGCTGTCAAGAAACTGGACAGGTTAGCTCAAGAAAGGGA
ACGGGAATTCAAATCTGAAGTGAGTGCAATTGGGAGAACTCATCACAAGA
ATCTAGTCCAGTTACTTGGATTCTGTGATGAAGCTCTCAACCGGCTTTTA
GTATACGAATTCATGGGCAATGGCACTTTGGCAAACTTAATATTTGCAAT
TCCAAAGCCTGACTGGAATCTCCGAGTTCGGATTTCACTGGAAATTGCAA
GAGGGCTTGTGTACTTGCATGAAGAGTGCAATGTGCCCATCATTCACTGC
GATATAAAGCCTCAAAACATACTTCTAGATAACTATTTCAGCGCAAAAAT
TTCTGACTTTGGATTATCCAAGTTGTTACTCTCTGATCAGTCTCGAACAC
ATACCATGATCAGAGGAACTCGGGGATATGTGGCTCCAGAATGGGTTCAG
ATGCACCTATCTCAGCCAAAGTG
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